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2FL1
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Crystal structure of red fluorescent protein from Zoanthus, zRFP574, at 2.4A resolution
Descriptor: Red fluorescent protein zoanRFP, SULFATE ION
Authors:Pletnev, V, Pletneva, N, Martynov, V, Tikhonova, T, Popov, B, Pletnev, S.
Deposit date:2006-01-05
Release date:2007-01-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a red fluorescent protein from Zoanthus, zRFP574, reveals a novel chromophore
Acta Crystallogr.,Sect.D, 62, 2006
2FM2
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BU of 2fm2 by Molmil
HCV NS3-4A protease domain complexed with a ketoamide inhibitor, SCH446211
Descriptor: BETA-MERCAPTOETHANOL, NS3 protease/helicase, NS4a protein, ...
Authors:Yi, M, Tong, X, Skelton, A, Chase, R, Chen, T, Prongay, A, Bogen, S.L, Saksena, A.K, Njoroge, F.G, Veselenak, R.L, Pyles, R.B, Bourne, N, Malcolm, B.A, Lemon, S.M.
Deposit date:2006-01-06
Release date:2006-02-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mutations conferring resistance to SCH6, a novel hepatitis C virus NS3/4A protease inhibitor. Reduced RNA replication fitness and partial rescue by second-site mutations
J.Biol.Chem., 281, 2006
2FI7
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BU of 2fi7 by Molmil
Crystal Structure of PilF : Functional implication in the type 4 pilus biogenesis in Pseudomonas aeruginosa
Descriptor: type 4 fimbrial biogenesis protein PilF
Authors:Kim, K.
Deposit date:2005-12-28
Release date:2006-06-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of PilF: functional implication in the type 4 pilus biogenesis in Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 340, 2006
2I2X
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Crystal structure of methanol:cobalamin methyltransferase complex MtaBC from Methanosarcina barkeri
Descriptor: 5-HYDROXYBENZIMIDAZOLYLCOB(III)AMIDE, Methyltransferase 1, POTASSIUM ION, ...
Authors:Hagemeier, C.H, Kruer, M, Thauer, R.K, Warkentin, E, Ermler, U.
Deposit date:2006-08-17
Release date:2006-11-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insight into the mechanism of biological methanol activation based on the crystal structure of the methanol-cobalamin methyltransferase complex
Proc.Natl.Acad.Sci.Usa, 103, 2006
2GSY
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BU of 2gsy by Molmil
The 2.6A structure of Infectious Bursal Virus Derived T=1 Particles
Descriptor: CALCIUM ION, polyprotein
Authors:Garriga, D, Querol-Audi, J, Abaitua, F, Saugar, I, Pous, J, Verdaguer, N, Caston, J.R, Rodriguez, J.F.
Deposit date:2006-04-27
Release date:2006-07-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The 2.6-angstrom structure of infectious bursal disease virus-derived t=1 particles reveals new stabilizing elements of the virus capsid.
J.Virol., 80, 2006
2GQM
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BU of 2gqm by Molmil
Solution structure of Human Cu(I)-Sco1
Descriptor: COPPER (I) ION, SCO1 protein homolog, mitochondrial
Authors:Banci, L, Bertini, I, Calderone, V, Ciofi-Baffoni, S, Mangani, S, Palumaa, P, Martinelli, M, Wang, S, Structural Proteomics in Europe (SPINE)
Deposit date:2006-04-21
Release date:2006-06-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A hint for the function of human Sco1 from different structures.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2GWE
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BU of 2gwe by Molmil
Crystal structure of D(G4T4G4) with six quadruplexes in the asymmetric unit.
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', POTASSIUM ION
Authors:Lee, M.P.H, Haider, S, Parkinson, G.N, Neidle, S.
Deposit date:2006-05-04
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of D(G4T4G4) with four and six quadruplexes in the asymmetric unit.
To be Published
2IWV
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Structure of the monomeric outer membrane porin OmpG in the open and closed conformation
Descriptor: CALCIUM ION, LAURYL DIMETHYLAMINE-N-OXIDE, OUTER MEMBRANE PROTEIN G, ...
Authors:Yildiz, O, Vinothkumar, K.R, Goswami, P, Kuehlbrandt, W.
Deposit date:2006-07-04
Release date:2006-08-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the Monomeric Outer-Membrane Porin Ompg in the Open and Closed Conformation.
Embo J., 25, 2006
2IV1
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SITE DIRECTED MUTAGENESIS OF KEY RESIDUES INVOLVED IN THE CATALYTIC MECHANISM OF CYANASE
Descriptor: CHLORIDE ION, CYANATE HYDRATASE, SULFATE ION
Authors:Guilloton, M, Walsh, M.A, Joachimiak, A, Anderson, P.M.
Deposit date:2006-06-08
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A Twin Set of Low Pka Arginines Ensures the Concerted Acid Base Catalytic Mechanism of Cyanase
To be Published
2H16
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BU of 2h16 by Molmil
Structure of human ADP-ribosylation factor-like 5 (ARL5)
Descriptor: ADP-ribosylation factor-like protein 5A, GUANOSINE-5'-DIPHOSPHATE, UNKNOWN ATOM OR ION
Authors:Rabeh, W.M, Tempel, W, Yaniw, D, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2006-05-16
Release date:2006-06-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of human ADP-ribosylation factor-like 5 (ARL5)
To be Published
2GQL
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BU of 2gql by Molmil
Solution structure of Human Ni(II)-Sco1
Descriptor: NICKEL (II) ION, SCO1 protein homolog, mitochondrial
Authors:Banci, L, Bertini, I, Calderone, V, Ciofi-Baffoni, S, Mangani, S, Palumaa, P, Martinelli, M, Wang, S, Structural Proteomics in Europe (SPINE)
Deposit date:2006-04-21
Release date:2006-06-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A hint for the function of human Sco1 from different structures.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2IHQ
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Crystal Structure of the Rat Androgen Receptor Ligand Binding Domian Complex with an N-Aryl-Hydroxybicyclohydantoin
Descriptor: 4-[(7R,7AS)-7-HYDROXY-1,3-DIOXOTETRAHYDRO-1H-PYRROLO[1,2-C]IMIDAZOL-2(3H)-YL]-1-NAPHTHONITRILE, Androgen receptor
Authors:Sack, J.S.
Deposit date:2006-09-27
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of potent, orally-active, and muscle-selective androgen receptor modulators based on an N-aryl-hydroxybicyclohydantoin scaffold.
J.Med.Chem., 49, 2006
2J3Z
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BU of 2j3z by Molmil
Crystal structure of the enzymatic component C2-I of the C2-toxin from Clostridium botulinum at pH 6.1
Descriptor: C2 TOXIN COMPONENT I, COBALT (II) ION, GLYCEROL, ...
Authors:Schleberger, C, Hochmann, H, Barth, H, Aktories, K, Schulz, G.E.
Deposit date:2006-08-23
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Action of the Binary C2 Toxin from Clostridium Botulinum.
J.Mol.Biol., 364, 2006
2IKQ
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BU of 2ikq by Molmil
Crystal structure of mouse Sts-1 PGM domain in complex with phosphate
Descriptor: PHOSPHATE ION, Suppressor of T-cell receptor signaling 1
Authors:Chen, Y, Nassar, N.
Deposit date:2006-10-02
Release date:2007-08-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.609 Å)
Cite:A Phosphatase Activity of Sts-1 Contributes to the Suppression of TCR Signaling
Mol.Cell, 27, 2007
2IUO
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BU of 2iuo by Molmil
Site Directed Mutagenesis of Key Residues Involved in the Catalytic Mechanism of Cyanase
Descriptor: AZIDE ION, BROMIDE ION, CHLORIDE ION, ...
Authors:Guilloton, M, Walsh, M.A, Joachimiak, A, Anderson, M.P.
Deposit date:2006-06-06
Release date:2006-06-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Twin Set of Low Pka Arginines Ensures the Concerted Acid Base Catalytic Mechanism of Cyanase
To be Published
2J7A
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BU of 2j7a by Molmil
Crystal structure of cytochrome c nitrite reductase NrfHA complex from Desulfovibrio vulgaris
Descriptor: ACETATE ION, CALCIUM ION, CYTOCHROME C NITRITE REDUCTASE NRFA, ...
Authors:Rodrigues, M.L, Oliveira, T.F, Pereira, I.A.C, Archer, M.
Deposit date:2006-10-06
Release date:2006-12-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-Ray Structure of the Membrane-Bound Cytochrome C Quinol Dehydrogenase Nrfh Reveals Novel Haem Coordination.
Embo J., 25, 2006
2J28
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MODEL OF E. COLI SRP BOUND TO 70S RNCS
Descriptor: 23S RIBOSOMAL RNA, 4.5S SIGNAL RECOGNITION PARTICLE RNA, 50S ribosomal protein L11, ...
Authors:Halic, M, Blau, M, Becker, T, Mielke, T, Pool, M.R, Wild, K, Sinning, I, Beckmann, R.
Deposit date:2006-08-16
Release date:2006-11-08
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Following the Signal Sequence from Ribosomal Tunnel Exit to Signal Recognition Particle
Nature, 444, 2006
2J9F
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BU of 2j9f by Molmil
Human branched-chain alpha-ketoacid dehydrogenase-decarboxylase E1b
Descriptor: 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT, 2-OXOISOVALERATE DEHYDROGENASE BETA SUBUNIT, C2-1-HYDROXY-3-METHYL-PROPYL-THIAMIN DIPHOSPHATE, ...
Authors:Jun, L, Machius, M, Chuang, J.L, Wynn, R.M, Chuang, D.T.
Deposit date:2006-11-07
Release date:2007-02-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The Two Active Sites in Human Branched-Chain Alpha- Keto Acid Dehydrogenase Operate Independently without an Obligatory Alternating-Site Mechanism.
J.Biol.Chem., 282, 2007
2ICZ
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BU of 2icz by Molmil
NMR Structures of the Expanded DNA 10bp xTGxTAxCxGCxAxGT:xACTxGCGxTAxCA
Descriptor: 5'-D(*(XAE)P*CP*TP*(XGA)P*CP*GP*(XTY)P*AP*(XCS)P*A)-3', 5'-D(*(XTY)P*GP*(XTY)P*AP*(XCS)P*(XGA)P*CP*(XAE)P*(XGA)P*T)-3'
Authors:Lynch, S.R.
Deposit date:2006-09-13
Release date:2006-11-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Toward a Designed, Functioning Genetic System with Expanded-Size Base Pairs: Solution Structure of the Eight-Base xDNA Double Helix.
J.Am.Chem.Soc., 128, 2006
2J58
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BU of 2j58 by Molmil
The structure of Wza
Descriptor: HEXANE, N-OCTANE, OUTER MEMBRANE LIPOPROTEIN WZA, ...
Authors:Dong, C, Naismith, J.H.
Deposit date:2006-09-12
Release date:2006-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Wza the Translocon for E. Coli Capsular Polysaccharides Defines a New Class of Membrane Protein.
Nature, 444, 2006
6QDF
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BU of 6qdf by Molmil
Leishmania major N-myristoyltransferase in complex with thienopyrimidine inhibitor IMP-0000096
Descriptor: 3-[[6-tert-butyl-2-[methyl-[(3S)-1-methylpyrrolidin-3-yl]amino]thieno[3,2-d]pyrimidin-4-yl]-methyl-amino]propanenitrile, Glycylpeptide N-tetradecanoyltransferase, MAGNESIUM ION, ...
Authors:Brannigan, J.A.
Deposit date:2019-01-01
Release date:2020-05-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Novel Thienopyrimidine Inhibitors of Leishmania N -Myristoyltransferase with On-Target Activity in Intracellular Amastigotes.
J.Med.Chem., 63, 2020
6QKY
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BU of 6qky by Molmil
Tryptophan synthase subunit alpha from Streptococcus pneumoniae with 3D domain swap in the core of TIM barrel
Descriptor: ACETIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Michalska, K, Kowiel, M, Bigelow, L, Endres, M, Gilski, M, Jaskolski, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-01-30
Release date:2019-03-27
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:3D domain swapping in the TIM barrel of the alpha subunit of Streptococcus pneumoniae tryptophan synthase.
Acta Crystallogr D Struct Biol, 76, 2020
6QDE
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BU of 6qde by Molmil
Leishmania major N-myristoyltransferase in complex with thienopyrimidine inhibitor IMP-0000877
Descriptor: 3-[[6-~{tert}-butyl-2-[3-(dimethylamino)propyl-methyl-amino]thieno[3,2-d]pyrimidin-4-yl]-methyl-amino]propanenitrile, Glycylpeptide N-tetradecanoyltransferase, MAGNESIUM ION, ...
Authors:Brannigan, J.A.
Deposit date:2019-01-01
Release date:2020-05-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Novel Thienopyrimidine Inhibitors of Leishmania N -Myristoyltransferase with On-Target Activity in Intracellular Amastigotes.
J.Med.Chem., 63, 2020
8B9P
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ACE2 in complex with bicyclic peptide inhibitor
Descriptor: 1-[3,5-bis(3-bromanylpropanoyl)-1,3,5-triazinan-1-yl]-3-bromanyl-propan-1-one, ALA-CYS-GLY-ARG-GLN-PHE-CYS-HIS-THR-LEU-MET-PRO-ARG-HIS-LEU-CYS-ALA-NH2, Processed angiotensin-converting enzyme 2
Authors:Brear, P, Lulla, A, Harman, M, Dods, R, Chen, L, Bezerra, G, Demydchuk, Y, Stanway, S, Hyvonen, M.
Deposit date:2022-10-06
Release date:2023-09-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structure-Guided Chemical Optimization of Bicyclic Peptide ( Bicycle ) Inhibitors of Angiotensin-Converting Enzyme 2.
J.Med.Chem., 66, 2023
6K1N
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PLP-bound form of a putative cystathionine gamma-lyase
Descriptor: Cystathionine gamma-lyase, PYRIDOXAL-5'-PHOSPHATE
Authors:Chen, S, Wang, Y.
Deposit date:2019-05-10
Release date:2020-05-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural characterization of cystathionine gamma-lyase smCSE enables aqueous metal quantum dot biosynthesis.
Int.J.Biol.Macromol., 174, 2021

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