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1LP6
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BU of 1lp6 by Molmil
Crystal structure of orotidine monophosphate decarboxylase complexed with CMP
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, orotidine monophosphate decarboxylase
Authors:Wu, N, Pai, E.F.
Deposit date:2002-05-07
Release date:2002-08-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of inhibitor complexes reveal an alternate binding mode in orotidine-5'-monophosphate decarboxylase.
J.Biol.Chem., 277, 2002
8FIH
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BU of 8fih by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: 3hb05, PHOSPHATE ION
Authors:Bera, A.K, Broerman, A, Baker, D.
Deposit date:2022-12-16
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8FIT
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BU of 8fit by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: cs074A
Authors:Bera, A.K, Praetorius, F, Baker, D.
Deposit date:2022-12-16
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8FIN
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BU of 8fin by Molmil
Multi-state design of two-state switchable hinge proteins
Descriptor: cs207A
Authors:Bera, A.K, Leung, P.J.Y, Baker, D.
Deposit date:2022-12-16
Release date:2023-08-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design of stimulus-responsive two-state hinge proteins.
Science, 381, 2023
8PF0
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BU of 8pf0 by Molmil
Diubiquitin-derived artificial binding protein (Affilin) variant Af1 specific to oncofetal fibronectin
Descriptor: Affilin variant Af1 (77405), COPPER (II) ION, IMIDAZOLE
Authors:Parthier, C, Katzschmann, A, Fiedler, E, Haupts, U, Reimann, A.
Deposit date:2023-06-15
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ubiquitin-derived artificial binding proteins targeting oncofetal fibronectin reveal scaffold plasticity by beta-strand slippage
to be published
8G9J
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BU of 8g9j by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR1
Authors:Huddy, T, Bera, A.K, Baker, D.
Deposit date:2023-02-21
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
8G9K
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BU of 8g9k by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR2
Authors:Bera, A.K, Huddy, T, Baker, D, Kang, A.
Deposit date:2023-02-21
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
1I5O
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BU of 1i5o by Molmil
CRYSTAL STRUCTURE OF MUTANT R105A OF E. COLI ASPARTATE TRANSCARBAMOYLASE
Descriptor: ASPARTATE TRANSCARBAMOYLASE CATALYTIC CHAIN, ASPARTATE TRANSCARBAMOYLASE REGULATORY CHAIN, N-(PHOSPHONACETYL)-L-ASPARTIC ACID, ...
Authors:Macol, C.P, Tsuruta, H, Stec, B, Kantrowitz, E.R.
Deposit date:2001-02-28
Release date:2001-05-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Direct structural evidence for a concerted allosteric transition in Escherichia coli aspartate transcarbamoylase.
Nat.Struct.Biol., 8, 2001
8GA7
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BU of 8ga7 by Molmil
Geometrically programmable nanomaterial construction using regularized protein building blocks
Descriptor: THR5
Authors:Huddy, T, Bera, A.K, Baker, D, Kang, A.
Deposit date:2023-02-22
Release date:2024-03-13
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Blueprinting extendable nanomaterials with standardized protein blocks.
Nature, 627, 2024
8PEQ
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BU of 8peq by Molmil
Complex of diubiquitin-derived artificial binding protein (Affilin) variant Af2 with its target oncofetal fibronectin (fragment 7B8)
Descriptor: Affilin variant Af2, Fibronectin, SULFATE ION
Authors:Parthier, C, Katzschmann, A, Fiedler, E, Haupts, U, Reimann, A.
Deposit date:2023-06-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Ubiquitin-derived artificial binding proteins targeting oncofetal fibronectin reveal scaffold plasticity by beta-strand slippage
to be published
1NA3
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BU of 1na3 by Molmil
Design of Stable alpha-Helical Arrays from an Idealized TPR Motif
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ...
Authors:Main, E, Xiong, Y, Cocco, M, D'Andrea, L, Regan, L.
Deposit date:2002-11-26
Release date:2003-06-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Design of Stable alpha-Helical Arrays from an Idealized TPR Motif
Structure, 11, 2003
1LE1
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BU of 1le1 by Molmil
NMR Structure of Tryptophan Zipper 2: A stable, Monomeric Beta-Hairpin with a Type I' Turn
Descriptor: Tryptophan Zipper 2
Authors:Cochran, A.G, Skelton, N.J, Starovasnik, M.A.
Deposit date:2002-04-09
Release date:2002-04-24
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Tryptophan zippers: stable, monomeric beta -hairpins.
Proc.Natl.Acad.Sci.USA, 98, 2001
1LOL
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BU of 1lol by Molmil
Crystal structure of orotidine monophosphate decarboxylase complex with XMP
Descriptor: 1,3-BUTANEDIOL, XANTHOSINE-5'-MONOPHOSPHATE, orotidine 5'-monophosphate decarboxylase
Authors:Wu, N, Pai, E.F.
Deposit date:2002-05-06
Release date:2002-08-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of inhibitor complexes reveal an alternate binding mode in orotidine-5'-monophosphate decarboxylase.
J.Biol.Chem., 277, 2002
1MV4
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BU of 1mv4 by Molmil
TM9A251-284: A Peptide Model of the C-Terminus of a Rat Striated Alpha Tropomyosin
Descriptor: Tropomyosin 1 alpha chain
Authors:Greenfield, N.J, Swapna, G.V.T, Huang, Y, Palm, T, Graboski, S, Montelione, G.T, Hitchcock-Degregori, S.E.
Deposit date:2002-09-24
Release date:2003-02-18
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:The Structure of the Carboxyl Terminus of Striated alpha-Tropomyosin in Solution Reveals an Unusual Parallel Arrangement of Interacting alpha-Helices
Biochemistry, 42, 2003
1NA0
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BU of 1na0 by Molmil
Design of Stable alpha-Helical Arrays from an Idealized TPR Motif
Descriptor: 1-methylethyl 1-thio-beta-D-galactopyranoside, ACETATE ION, CHLORIDE ION, ...
Authors:Main, E, Xiong, Y, Cocco, M, D'Andrea, L, Regan, L.
Deposit date:2002-11-26
Release date:2003-06-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Design of Stable alpha-Helical Arrays from an Idealized TPR Motif
Structure, 11, 2003
1KD8
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BU of 1kd8 by Molmil
X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12Ia16V BASE-d12La16L
Descriptor: GCN4 ACID BASE HETERODIMER ACID-d12Ia16V, GCN4 ACID BASE HETERODIMER BASE-d12La16L
Authors:Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S.
Deposit date:2001-11-12
Release date:2001-11-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KD9
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BU of 1kd9 by Molmil
X-RAY STRUCTURE OF THE COILED COIL GCN4 ACID BASE HETERODIMER ACID-d12La16L BASE-d12La16L
Descriptor: GCN4 ACID BASE HETERODIMER ACID-d12La16L, GCN4 ACID BASE HETERODIMER BASE-d12La16L
Authors:Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S.
Deposit date:2001-11-12
Release date:2001-11-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
1KDD
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BU of 1kdd by Molmil
X-ray structure of the coiled coil GCN4 ACID BASE HETERODIMER ACID-d12La16I BASE-d12La16L
Descriptor: GCN4 ACID BASE HETERODIMER ACID-d12La16I, GCN4 ACID BASE HETERODIMER BASE-d12La16L
Authors:Keating, A.E, Malashkevich, V.N, Tidor, B, Kim, P.S.
Deposit date:2001-11-12
Release date:2001-11-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Side-chain repacking calculations for predicting structures and stabilities of heterodimeric coiled coils.
Proc.Natl.Acad.Sci.USA, 98, 2001
1G6U
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BU of 1g6u by Molmil
CRYSTAL STRUCTURE OF A DOMAIN SWAPPED DIMER
Descriptor: DOMAIN SWAPPED DIMER, SULFATE ION, trifluoroacetic acid
Authors:Ogihara, N.L, Ghirlanda, G, Bryson, J.W, Gingery, M, DeGrado, W.F, Eisenberg, D.
Deposit date:2000-11-07
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Design of three-dimensional domain-swapped dimers and fibrous oligomers.
Proc.Natl.Acad.Sci.USA, 98, 2001
1J79
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BU of 1j79 by Molmil
Molecular Structure of Dihydroorotase: A Paradigm for Catalysis Through the Use of a Binuclear Metal Center
Descriptor: N-CARBAMOYL-L-ASPARTATE, OROTIC ACID, ZINC ION, ...
Authors:Thoden, J.B, Phillips Jr, G.N, Neal, T.M, Raushel, F.M, Holden, H.M.
Deposit date:2001-05-16
Release date:2001-06-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular structure of dihydroorotase: a paradigm for catalysis through the use of a binuclear metal center.
Biochemistry, 40, 2001
1IHQ
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BU of 1ihq by Molmil
GLYTM1BZIP: A CHIMERIC PEPTIDE MODEL OF THE N-TERMINUS OF A RAT SHORT ALPHA TROPOMYOSIN WITH THE N-TERMINUS ENCODED BY EXON 1B
Descriptor: CHIMERIC PEPTIDE GlyTM1bZip: TROPOMYOSIN ALPHA CHAIN, BRAIN-3 and GENERAL CONTROL PROTEIN GCN4
Authors:Greenfield, N.J, Yuang, Y.J, Palm, T, Swapna, G.V, Monleon, D, Montelione, G.T, Hitchcock-Degregori, S.E, Northeast Structural Genomics Consortium (NESG)
Deposit date:2001-04-19
Release date:2001-10-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR structure and folding dynamics of the N terminus of a rat non-muscle alpha-tropomyosin in an engineered chimeric protein.
J.Mol.Biol., 312, 2001
5YS7
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BU of 5ys7 by Molmil
Crystal structure of an OspA mutant
Descriptor: Outer Surface Protein A
Authors:Takada, S, Makabe, K.
Deposit date:2017-11-13
Release date:2018-11-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of an OspA mutant
To Be Published
6AIS
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BU of 6ais by Molmil
Loop deletion mutant (deleting two residues)
Descriptor: Outer surface protein A
Authors:Shiga, S, Makabe, K.
Deposit date:2018-08-24
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Domain-Swapping Design by Polyproline Rod Insertion.
Chembiochem, 20, 2019
6AZF
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BU of 6azf by Molmil
PawL-Derived Peptide PLP-10 (trans conformer)
Descriptor: GLY-SER-PRO-LEU-PHE-ASP
Authors:Fisher, M, Mylne, J.S, Howard, M.J.
Deposit date:2017-09-11
Release date:2018-03-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch.
Plant Direct, 2, 2018
6AXI
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BU of 6axi by Molmil
PawL-Derived Peptide PLP-2
Descriptor: ASP-LEU-PHE-VAL-PRO-PRO-ILE-ASP
Authors:Fisher, M, Mylne, J.S, Howard, M.J.
Deposit date:2017-09-06
Release date:2018-03-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch.
Plant Direct, 2, 2018

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