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3FMH
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BU of 3fmh by Molmil
P38 kinase crystal structure in complex with 6-(2,4-Difluoro-phenoxy)-8-methyl-2-((R)-1-methyl-2-tetrazol-2-yl-ethylamino)-8H-pyrido[2,3-d]pyrimidin-7-one
Descriptor: 6-(2,4-difluorophenoxy)-8-methyl-2-{[(1R)-1-methyl-2-(2H-tetrazol-2-yl)ethyl]amino}pyrido[2,3-d]pyrimidin-7(8H)-one, Mitogen-activated protein kinase 14
Authors:Kuglstatter, A, Ghate, M.
Deposit date:2008-12-22
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Discovery of Pamapimod and R1487 as Orally Bioavailable and Highly Selective Inhibitors of p38 Map Kinase
To be Published
8RR6
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BU of 8rr6 by Molmil
MenT3 (aka TglT) toxin (Rv1045) from Mycobacterium tuberculosis H37Rv, non-phosphorylated
Descriptor: Nucleotidyl transferase AbiEii/AbiGii toxin family protein
Authors:Arrowsmith, T.J, Blower, T.R.
Deposit date:2024-01-22
Release date:2024-09-11
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Inducible auto-phosphorylation regulates a widespread family of nucleotidyltransferase toxins.
Nat Commun, 15, 2024
8RSM
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BU of 8rsm by Molmil
Crystal structure of Streptococcus pyogenes macrodomain in complex with ADP-ribose
Descriptor: Protein-ADP-ribose hydrolase, ZINC ION, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Ariza, A.
Deposit date:2024-01-24
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains.
J.Biol.Chem., 300, 2024
4E6A
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BU of 4e6a by Molmil
p38a-PIA23 complex
Descriptor: (2S)-2-methoxy-3-(octadecyloxy)propyl (1R,2R,3R,4S,6S)-2,3,4-trihydroxy-6-(2-methylpropoxy)cyclohexyl hydrogen (S)-phosphate, Mitogen-activated protein kinase 14
Authors:Livnah, O, Tzarum, N, Eisenberg-Domovich, Y.
Deposit date:2012-03-15
Release date:2012-10-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Lipid Molecules Induce p38 alpha Activation via a Novel Molecular Switch.
J.Mol.Biol., 424, 2012
4UNP
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BU of 4unp by Molmil
Mtb TMK in complex with compound 34
Descriptor: 5-methyl-7-propyl-1,6-naphthyridin-2(1H)-one, THYMIDYLATE KINASE
Authors:Read, J.A, Hussein, S, Gingell, H, Tucker, J.
Deposit date:2014-05-30
Release date:2015-01-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure Guided Lead Generation for M. Tuberculosis Thymidylate Kinase (Mtb Tmk): Discovery of 3-Cyanopyridone and 1,6-Naphthyridin-2-One as Potent Inhibitors.
J.Med.Chem., 58, 2015
4UMW
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BU of 4umw by Molmil
CRYSTAL STRUCTURE OF A ZINC-TRANSPORTING PIB-TYPE ATPASE IN E2.PI STATE
Descriptor: MAGNESIUM ION, TETRAFLUOROALUMINATE ION, ZINC-TRANSPORTING ATPASE
Authors:Wang, K.T, Sitsel, O, Meloni, G, Autzen, H.E, Andersson, M, Klymchuk, T, Nielsen, A.M, Rees, D.C, Nissen, P, Gourdon, P.
Deposit date:2014-05-21
Release date:2014-08-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Structure and Mechanism of Zn(2+)-Transporting P-Type Atpases.
Nature, 514, 2014
3NOV
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BU of 3nov by Molmil
Crystal Structure of D17E Isocyanide Hydratase from Pseudomonas fluorescens
Descriptor: ACETATE ION, ThiJ/PfpI family protein
Authors:Lakshminarasimhan, M, Madzelan, P, Nan, R, Milkovic, N.M, Wilson, M.A.
Deposit date:2010-06-25
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Evolution of New Enzymatic Function by Structural Modulation of Cysteine Reactivity in Pseudomonas fluorescens Isocyanide Hydratase.
J.Biol.Chem., 285, 2010
8RSK
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BU of 8rsk by Molmil
Crystal structure of Methanobrevibacter oralis macrodomain in complex with Asn-ADPr
Descriptor: (2~{S})-4-[[(2~{S},3~{R},4~{S},5~{R})-5-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]amino]-2-azanyl-4-oxidanylidene-butanoic acid, ACETATE ION, GLYCEROL, ...
Authors:Ariza, A.
Deposit date:2024-01-24
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.359 Å)
Cite:Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains.
J.Biol.Chem., 300, 2024
8R9T
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BU of 8r9t by Molmil
Crystal structure of the C-terminal domain of Chlamydomonas reinhardtii CFAP410
Descriptor: CALCIUM ION, Flagellar associated protein
Authors:Stadler, A, Dong, G.
Deposit date:2023-11-30
Release date:2024-09-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The C-terminus of CFAP410 forms a tetrameric helical bundle that is essential for its localization to the basal body.
Open Biology, 14, 2024
4UNQ
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BU of 4unq by Molmil
Mtb TMK in complex with compound 36
Descriptor: 4-[(R)-methylsulfinyl]-2-oxo-6-[3-(trifluoromethoxy)phenyl]-1,2-dihydropyridine-3-carbonitrile, SODIUM ION, THYMIDYLATE KINASE
Authors:Read, J.A, Hussein, S, Gingell, H, Tucker, J.
Deposit date:2014-05-30
Release date:2015-06-24
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure Guided Lead Generation for M. Tuberculosis Thymidylate Kinase (Mtb Tmk): Discovery of 3-Cyanopyridone and 1,6-Naphthyridin-2-One as Potent Inhibitors.
J.Med.Chem., 58, 2015
4UNS
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BU of 4uns by Molmil
Mtb TMK in complex with compound 40
Descriptor: N-[4-(3-CYANO-7-ETHYL-5-METHYL-2-OXO-1H-1,6-NAPHTHYRIDIN-4-YL)PHENYL]METHANESULFONAMIDE, SODIUM ION, THYMIDYLATE KINASE
Authors:Read, J.A, Hussein, S, Gingell, H, Tucker, J.
Deposit date:2014-05-30
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structure Guided Lead Generation for M. Tuberculosis Thymidylate Kinase (Mtb Tmk): Discovery of 3-Cyanopyridone and 1,6-Naphthyridin-2-One as Potent Inhibitors.
J.Med.Chem., 58, 2015
1ZUG
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BU of 1zug by Molmil
STRUCTURE OF PHAGE 434 CRO PROTEIN, NMR, 20 STRUCTURES
Descriptor: PHAGE 434 CRO PROTEIN
Authors:Padmanabhan, S, Jimenez, M.A, Gonzalez, C, Sanz, J.M, Gimenez-Gallego, G, Rico, M.
Deposit date:1997-03-14
Release date:1997-07-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional solution structure and stability of phage 434 Cro protein.
Biochemistry, 36, 1997
8RSJ
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BU of 8rsj by Molmil
Crystal structure of Methanobrevibacter oralis macrodomain in complex with ADPr in open conformation
Descriptor: GLYCEROL, O-acetyl-ADP-ribose deacetylase, ZINC ION, ...
Authors:Ariza, A.
Deposit date:2024-01-24
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains.
J.Biol.Chem., 300, 2024
4UOH
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BU of 4uoh by Molmil
Crystallographic structure of nucleoside diphosphate kinase from Litopenaeus vannamei complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NUCLEOSIDE DIPHOSPHATE KINASE
Authors:Lopez-Zavala, A.A, Guevara-Hernandez, E, Stojanoff, V, Rudino-Pinera, E, Sotelo-Mundo, R.R.
Deposit date:2014-06-03
Release date:2014-09-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Structure of Nucleoside Diphosphate Kinase from Pacific Shrimp (Litopenaeus Vannamei) in Binary Complexes with Purine and Pyrimidine Nucleoside Diphosphates
Acta Crystallogr.,Sect.F, 79, 2014
8RSL
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BU of 8rsl by Molmil
Crystal structure of Staphylococcus aureus macrodomain
Descriptor: Protein-ADP-ribose hydrolase, ZINC ION
Authors:Ariza, A.
Deposit date:2024-01-24
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains.
J.Biol.Chem., 300, 2024
8RSI
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BU of 8rsi by Molmil
Crystal structure of Methanobrevibacter oralis macrodomain
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLUTAMIC ACID, ...
Authors:Ariza, A.
Deposit date:2024-01-24
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.059 Å)
Cite:Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains.
J.Biol.Chem., 300, 2024
8RSN
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BU of 8rsn by Molmil
macrodomain-fused SirTM (Mfs1) from Fusarium oxysporum f. sp. cubense race 1
Descriptor: 1,2-ETHANEDIOL, ADP-ribose 1''-phosphate phosphatase, POTASSIUM ION, ...
Authors:Ariza, A.
Deposit date:2024-01-24
Release date:2024-09-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.219 Å)
Cite:Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains.
J.Biol.Chem., 300, 2024
3IFJ
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BU of 3ifj by Molmil
Crystal structure of Mtu recA intein, splicing domain
Descriptor: Endonuclease PI-MtuI, ZINC ION
Authors:Van Roey, P, Belfort, M.
Deposit date:2009-07-24
Release date:2009-10-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selection and structure of hyperactive inteins: peripheral changes relayed to the catalytic center.
J.Mol.Biol., 393, 2009
8AO6
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BU of 8ao6 by Molmil
electrophilic inhibitor (7) of ERK2
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Mitogen-activated protein kinase 1, ...
Authors:Cleasby, A.
Deposit date:2022-08-08
Release date:2022-09-28
Last modified:2022-10-05
Method:X-RAY DIFFRACTION (1.811 Å)
Cite:X-ray Screening of an Electrophilic Fragment Library and Application toward the Development of a Novel ERK 1/2 Covalent Inhibitor.
J.Med.Chem., 65, 2022
8AO8
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BU of 8ao8 by Molmil
Specific covalent inhibitor(9) of ERK2
Descriptor: 1,2-ETHANEDIOL, 1-[(2~{R})-2-(3-methylimidazol-4-yl)piperidin-1-yl]propan-1-one, Mitogen-activated protein kinase 1, ...
Authors:Cleasby, A.
Deposit date:2022-08-08
Release date:2022-09-28
Last modified:2023-05-24
Method:X-RAY DIFFRACTION (1.697 Å)
Cite:X-ray Screening of an Electrophilic Fragment Library and Application toward the Development of a Novel ERK 1/2 Covalent Inhibitor.
J.Med.Chem., 65, 2022
3FLN
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BU of 3fln by Molmil
P38 kinase crystal structure in complex with R1487
Descriptor: 6-(2,4-difluorophenoxy)-8-methyl-2-(tetrahydro-2H-pyran-4-ylamino)pyrido[2,3-d]pyrimidin-7(8H)-one, Mitogen-activated protein kinase 14
Authors:Kuglstatter, A, Knapp, M.
Deposit date:2008-12-19
Release date:2009-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Discovery of Pamapimod, R1503 and R1487 as Orally Bioavailable and Highly Selective Inhibitors of p38 Map Kinase
To be Published
8AO5
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BU of 8ao5 by Molmil
Specific covalent inhibitor (6) of ERK2
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Mitogen-activated protein kinase 1, SULFATE ION, ...
Authors:Cleasby, A.
Deposit date:2022-08-08
Release date:2022-09-28
Last modified:2022-10-05
Method:X-RAY DIFFRACTION (1.595 Å)
Cite:X-ray Screening of an Electrophilic Fragment Library and Application toward the Development of a Novel ERK 1/2 Covalent Inhibitor.
J.Med.Chem., 65, 2022
8AOB
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BU of 8aob by Molmil
Specific covalent inhibitor(12) of ERK2
Descriptor: DI(HYDROXYETHYL)ETHER, Mitogen-activated protein kinase 1, SULFATE ION, ...
Authors:Cleasby, A.
Deposit date:2022-08-08
Release date:2022-09-28
Last modified:2022-10-05
Method:X-RAY DIFFRACTION (1.623 Å)
Cite:X-ray Screening of an Electrophilic Fragment Library and Application toward the Development of a Novel ERK 1/2 Covalent Inhibitor.
J.Med.Chem., 65, 2022
8AOF
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BU of 8aof by Molmil
Specific covalent inhibitor(16) of ERK2
Descriptor: 1,2-ETHANEDIOL, Mitogen-activated protein kinase 1, SULFATE ION, ...
Authors:Cleasby, A.
Deposit date:2022-08-08
Release date:2022-09-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.615 Å)
Cite:X-ray Screening of an Electrophilic Fragment Library and Application toward the Development of a Novel ERK 1/2 Covalent Inhibitor.
J.Med.Chem., 65, 2022
3FLY
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BU of 3fly by Molmil
P38 kinase crystal structure in complex with 6-(2,4-difluoro-phenoxy)-2-isopropylamino-8-methyl-8h-pyrido[2,3-d]pyrimidin-7-one
Descriptor: 6-(2,4-difluorophenoxy)-8-methyl-2-[(1-methylethyl)amino]pyrido[2,3-d]pyrimidin-7(8H)-one, Mitogen-activated protein kinase 14
Authors:Kuglstatter, A, Ghate, M.
Deposit date:2008-12-19
Release date:2009-12-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Discovery of Pamapimod, R1503 and R1487 as Orally Bioavailable and Highly Selective Inhibitors of p38 Map Kinase
To be Published

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PDB entries from 2024-10-16

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