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5IJC
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BU of 5ijc by Molmil
The crystal structure of mouse TLR4/MD-2/neoseptin-3 complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lymphocyte antigen 96, ...
Authors:Wang, Y, Su, L, Morin, M.D, Jones, B.T, Whitby, L.R, Surakattula, M, Huang, H, Shi, H, Choi, J.H, Wang, K, Moresco, E.M, Berger, M, Zhan, X, Zhang, H, Boger, D.L, Beutler, B.
Deposit date:2016-03-01
Release date:2016-04-27
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:TLR4/MD-2 activation by a synthetic agonist with no similarity to LPS.
Proc.Natl.Acad.Sci.USA, 113, 2016
1KCW
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BU of 1kcw by Molmil
X-RAY CRYSTAL STRUCTURE OF HUMAN CERULOPLASMIN AT 3.0 ANGSTROMS
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CERULOPLASMIN, COPPER (II) ION, ...
Authors:Card, G.L, Zaitsev, V.N, Lindley, P.F.
Deposit date:1996-09-25
Release date:1997-02-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The X-ray structure of human serum ceruloplasmin at 3.1 angstrom: Nature of the copper centres.
J.Biol.Inorg.Chem., 1, 1996
5VKI
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BU of 5vki by Molmil
Crystal structure of P[19] rotavirus VP8* complexed with mucin core 2
Descriptor: GLYCEROL, Outer capsid protein VP4, SULFATE ION, ...
Authors:Xu, S, Liu, Y, Woodruff, A, Zhong, W, Jiang, X, Kennedy, M.A.
Deposit date:2017-04-21
Release date:2017-11-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of glycan specificity of P[19] VP8*: Implications for rotavirus zoonosis and evolution.
PLoS Pathog., 13, 2017
5VKS
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BU of 5vks by Molmil
Crystal structure of P[19] rotavirus VP8* complexed with LNFPI
Descriptor: GLYCEROL, Outer capsid protein VP4, SULFATE ION, ...
Authors:Xu, S, Liu, Y, Woodruff, A, Zhong, W, Jiang, X, Kennedy, M.A.
Deposit date:2017-04-22
Release date:2017-11-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural basis of glycan specificity of P[19] VP8*: Implications for rotavirus zoonosis and evolution.
PLoS Pathog., 13, 2017
8W2J
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BU of 8w2j by Molmil
Human liver phosphofructokinase-1 filament in the T-state conformation
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent 6-phosphofructokinase, ...
Authors:Lynch, E.M, Kollman, J.M, Webb, B.A.
Deposit date:2024-02-20
Release date:2024-09-11
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for allosteric regulation of human phosphofructokinase-1.
Nat Commun, 15, 2024
6PA6
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BU of 6pa6 by Molmil
ECAII(T89V,K162T) MUTANT IN COMPLEX WITH L-ASN AT PH 8.3 in space group C2
Descriptor: ASPARAGINE, IMIDAZOLE, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-06-11
Release date:2019-09-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase.
Protein Sci., 28, 2019
5VH5
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BU of 5vh5 by Molmil
Crystal Structure of Fc fragment of anti-TNFa antibody infliximab
Descriptor: ACETATE ION, Infliximab Fc, ZINC ION, ...
Authors:Mayclin, S.J, Edwards, T.E, Lerch, T.F, Conlan, H, Sharpe, P.
Deposit date:2017-04-12
Release date:2017-05-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Infliximab crystal structures reveal insights into self-association.
MAbs, 9, 2017
6OZY
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BU of 6ozy by Molmil
Wild type GapR crystal structure 2 from C. crescentus
Descriptor: CADMIUM ION, UPF0335 protein CC_3319
Authors:Tarry, M, Harmel, C, Taylor, J.A, Marczynski, G.T, Schmeing, T.M.
Deposit date:2019-05-16
Release date:2019-11-27
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.014 Å)
Cite:Structures of GapR reveal a central channel which could accommodate B-DNA.
Sci Rep, 9, 2019
2BOA
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BU of 2boa by Molmil
Human procarboxypeptidase A4.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CARBOXYPEPTIDASE A4, ...
Authors:Garcia-Castellanos, R, Bonet-Figueredo, R, Pallares, I, Ventura, S, Aviles, F.X, Vendrell, J, Gomis-Ruth, F.X.
Deposit date:2005-04-08
Release date:2005-12-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Detailed Molecular Comparison between the Inhibition Mode of A/B-Type Carboxypeptidases in the Zymogen State and by the Endogenous Inhibitor Latexin.
Cell.Mol.Life Sci., 62, 2005
8W1W
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BU of 8w1w by Molmil
2.03 angstrom resolution crystal structure of as-isolated KatG from Mycobacterium tuberculosis with an MYW-OOH cofactor
Descriptor: ACETATE ION, Catalase-peroxidase, GLYCEROL, ...
Authors:Liu, A, Li, J.
Deposit date:2024-02-19
Release date:2024-10-23
Last modified:2025-01-08
Method:X-RAY DIFFRACTION (2.033 Å)
Cite:Indole N-Linked Hydroperoxyl Adduct of Protein-Derived Cofactor Modulating Catalase-Peroxidase Functions.
Angew.Chem.Int.Ed.Engl., 63, 2024
8VEG
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BU of 8veg by Molmil
Crystal structure of an engineered conformationally rigid anti-Tryptase Fab variant E104.v1.4DS.S112F
Descriptor: Fab E104.v1.4DS.S112F heavy chain, Fab E104.v1.4DS.S112F light chain
Authors:Kung, J.E, Sudhamsu, J.
Deposit date:2023-12-18
Release date:2024-10-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
2BMZ
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BU of 2bmz by Molmil
Banana Lectin bound to Xyl-b1,3 Man-a-O-Methyl (XM)
Descriptor: CADMIUM ION, RIPENING-ASSOCIATED PROTEIN, SULFATE ION, ...
Authors:Meagher, J.L, Winter, H.C, Ezell, P, Goldstein, I.J, Stuckey, J.A.
Deposit date:2005-03-17
Release date:2005-06-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Banana Lectin Reveals a Novel Second Sugar Binding Site.
Glycobiology, 15, 2005
3TF6
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BU of 3tf6 by Molmil
Crystal structure of Neutrophil gelatinase-associated lipocalin (C87S mutant) in complex with Europium and the siderophore analog tren(cam)(1,2-hopo)2
Descriptor: 2,3-DIHYDROXY-BENZOIC ACID, CHLORIDE ION, EUROPIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-08-15
Release date:2011-09-07
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Parsing the functional specificity of Siderocalin / Lipocalin 2 / NGAL for siderophores and related small-molecule ligands
To be published, 7
2BY1
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BU of 2by1 by Molmil
Is radiation damage dependent on the dose-rate used during macromolecular crystallography data collection
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BETA-MERCAPTOETHANOL, MAGNESIUM ION, ...
Authors:Leiros, H.-K.S, Timmins, J, Ravelli, R.B.G, McSweeney, S.M.
Deposit date:2005-07-28
Release date:2006-02-06
Last modified:2025-10-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Is Radiation Damage Dependent on the Dose-Rate Used During Macromolecular Crystallography Data Collection?
Acta Crystallogr.,Sect.D, 62, 2006
7A57
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BU of 7a57 by Molmil
La Crosse Virus Envelope Glycoprotein Gc W1066H Mutant Fusion Domains in Postfusion Conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Envelopment polyprotein
Authors:Hellert, J, Guardado-Calvo, P, Rey, F.A.
Deposit date:2020-08-20
Release date:2021-09-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.155 Å)
Cite:Structure, function, and evolution of the Orthobunyavirus membrane fusion glycoprotein.
Cell Rep, 42, 2023
2C4L
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BU of 2c4l by Molmil
Structure of Neuraminidase Subtype N9 Complexed with 30 MM Sialic Acid (NANA, NEU5AC), Crystal Soaked for 24 Hours at 291 K and Finally Backsoaked for 30 Min in a Cryoprotectant Solution which did not contain NEU5AC
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, N-acetyl-alpha-neuraminic acid, ...
Authors:Rudino-Pinera, E, Tunnah, P, Crennell, S.J, Webster, R.G, Laver, W.G, Garman, E.F.
Deposit date:2005-10-20
Release date:2007-03-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Crystal Structure of Influenza Type a Virus Neuraminidase of the N6 Subtype at 1.85 A Resolution
To be Published
5VIU
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BU of 5viu by Molmil
Crystal Structure of Acetylornithine Aminotransferase from Elizabethkingia anophelis
Descriptor: 1,2-ETHANEDIOL, Acetylornithine aminotransferase, CITRIC ACID
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-04-17
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Acetylornithine Aminotransferase from Elizabethkingia anophelis
to be published
2BD5
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BU of 2bd5 by Molmil
Porcine pancreatic elastase complexed with beta-casomorphin-7 and Lys-Ser at pH 5 and immersed in pH 9 buffer for 30 seconds
Descriptor: CALCIUM ION, Chymotrypsin-like elastase family member 1, SULFATE ION, ...
Authors:Liu, B, Schofield, C.J, Wilmouth, R.C.
Deposit date:2005-10-20
Release date:2006-05-30
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analyses on intermediates in serine protease catalysis
J.Biol.Chem., 281, 2006
6PAA
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BU of 6paa by Molmil
E. coli L-asparaginase II mutant (T12V) in complex with L-Asp at pH 5.5
Descriptor: ASPARTIC ACID, L-asparaginase 2
Authors:Lubkowski, J, Wlodawer, A.
Deposit date:2019-06-11
Release date:2019-09-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase.
Protein Sci., 28, 2019
2BED
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BU of 2bed by Molmil
Structure of FPT bound to inhibitor SCH207736
Descriptor: (11S)-8-CHLORO-11-[1-(METHYLSULFONYL)PIPERIDIN-4-YL]-6-PIPERAZIN-1-YL-11H-BENZO[5,6]CYCLOHEPTA[1,2-B]PYRIDINE, FARNESYL DIPHOSPHATE, Protein farnesyltransferase beta subunit, ...
Authors:Strickland, C.
Deposit date:2005-10-24
Release date:2006-08-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Enhanced FTase activity achieved via piperazine interaction with catalytic zinc.
Bioorg.Med.Chem.Lett., 16, 2006
7A59
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BU of 7a59 by Molmil
Crimean-Congo Hemorrhagic Fever Virus Envelope Glycoprotein Gc W1191H/W1197A/W1199A Mutant in Postfusion Conformation (Orthorhombic Crystal Form)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Envelopment polyprotein, ...
Authors:Hellert, J, Guardado-Calvo, P, Rey, F.A.
Deposit date:2020-08-20
Release date:2021-10-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.197 Å)
Cite:Structural basis of synergistic neutralization of Crimean-Congo hemorrhagic fever virus by human antibodies.
Science, 375, 2022
8VSJ
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BU of 8vsj by Molmil
Engineered peptide-specific binder in complex with HLA-DR1/CLIP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Class-II-associated invariant chain peptide, HLA class II histocompatibility antigen DR beta chain, ...
Authors:Jude, K.M, Yang, X, Du, H, Kassardjian, A, Julien, J.-P, Huang, P, Garcia, K.C.
Deposit date:2024-01-24
Release date:2024-10-02
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (2.28 Å)
Cite:A general system for targeting MHC class II-antigen complex via a single adaptable loop.
Nat.Biotechnol., 2024
8VGG
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BU of 8vgg by Molmil
Crystal structure of an engineered conformationally rigid anti-Tryptase Fab variant E104.v1.6DS
Descriptor: Fab E104.v1.6DS heavy chain, Fab E104.v1.6DS light chain
Authors:Kung, J.E, Sudhamsu, J.
Deposit date:2023-12-27
Release date:2024-10-30
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Disulfi de constrained Fabs overcome target size limitation for high-resolution single-particle cryo-EM.
Biorxiv, 2024
7LRF
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BU of 7lrf by Molmil
Netrin-1 in complex with SOS
Descriptor: 1,2-ETHANEDIOL, 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Gupta, M, McDougall, M, Torres, A.M, Stetefeld, J.
Deposit date:2021-02-16
Release date:2022-02-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation.
Nat Commun, 14, 2023
2BWC
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BU of 2bwc by Molmil
Structure of Endoglucanase 12A (Cel12A) from Rhodothermus marinus in complex with cellopentaose (5 minute soak)
Descriptor: ENDOGLUCANASE, GLYCEROL, SULFATE ION, ...
Authors:Crennell, S.J, Nordberg-Karlsson, E.
Deposit date:2005-07-13
Release date:2005-12-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Dimerisation and an increase in active site aromatic groups as adaptations to high temperatures: X-ray solution scattering and substrate-bound crystal structures of Rhodothermus marinus endoglucanase Cel12A.
J. Mol. Biol., 356, 2006

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