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PDB: 183 results

1T6T
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BU of 1t6t by Molmil
putative protein from Aquifex aeolicus
Descriptor: putative protein
Authors:Cuff, M.E, Zhou, M, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-05-07
Release date:2004-08-03
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:putative protein from Aquifex aeolicus
To be Published
2FCJ
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BU of 2fcj by Molmil
Structure of small TOPRIM domain protein from Bacillus stearothermophilus.
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Rezacova, P, Chen, Y, Borek, D, Collart, F, Joachimiak, A, Otwinowski, Z, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-12-12
Release date:2006-01-24
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus.
Proteins, 70, 2008
2I5R
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BU of 2i5r by Molmil
Structure of small Toprim domain-containing protein from B. stearothermophilus in complex with Mg2+
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MAGNESIUM ION, ...
Authors:Rezacova, P, Borek, D, Otwinowski, Z, Joachimiak, A, Moy, S.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-25
Release date:2007-07-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus.
Proteins, 70, 2007
6Z2B
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BU of 6z2b by Molmil
Toprim domain of RNase M5 bound with two Mg2+ ions
Descriptor: MAGNESIUM ION, Ribonuclease M5
Authors:Oerum, S, Catala, M, Tisne, C.
Deposit date:2020-05-15
Release date:2021-03-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.138 Å)
Cite:Structural studies of RNase M5 reveal two-metal-ion supported two-step dsRNA cleavage for 5S rRNA maturation.
Rna Biol., 18, 2021
6TG6
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BU of 6tg6 by Molmil
Toprim domain of RNase M5
Descriptor: Ribonuclease M5
Authors:Oerum, S, Catala, M, Tisne, C.
Deposit date:2019-11-15
Release date:2020-09-23
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
2AU3
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BU of 2au3 by Molmil
Crystal Structure of the Aquifex aeolicus primase (Zinc Binding and RNA Polymerase Domains)
Descriptor: DNA primase, ZINC ION
Authors:Corn, J.E, Pease, P.J, Hura, G.L, Berger, J.M.
Deposit date:2005-08-26
Release date:2005-11-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crosstalk between primase subunits can act to regulate primer synthesis in trans.
Mol.Cell, 20, 2005
1VDD
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BU of 1vdd by Molmil
Crystal structure of recombinational repair protein RecR
Descriptor: IMIDAZOLE, Recombination protein recR, ZINC ION
Authors:Lee, B.I, Kim, K.H, Suh, S.W.
Deposit date:2004-03-20
Release date:2004-05-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ring-shaped architecture of RecR: implications for its role in homologous recombinational DNA repair
Embo J., 23, 2004
1NUI
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BU of 1nui by Molmil
Crystal Structure of the primase fragment of Bacteriophage T7 primase-helicase protein
Descriptor: DNA primase/helicase, MAGNESIUM ION, ZINC ION
Authors:Kato, M, Ito, T, Wagner, G, Richardson, C.C, Ellenberger, T.
Deposit date:2003-01-31
Release date:2003-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Modular Architecture of the Bacteriophage T7 Primase Couples RNA primer Synthesis to DNA Synthesis
Mol.Cell, 11, 2003
1Q57
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BU of 1q57 by Molmil
The Crystal Structure of the Bifunctional Primase-Helicase of Bacteriophage T7
Descriptor: DNA primase/helicase
Authors:Toth, E.A, Li, Y, Sawaya, M.R, Cheng, Y, Ellenberger, T.
Deposit date:2003-08-06
Release date:2003-11-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:The Crystal Structure of the Bifunctional Primase-Helicase of Bacteriophage T7
Mol.Cell, 12, 2003
6N7N
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BU of 6n7n by Molmil
Structure of bacteriophage T7 E343Q mutant gp4 helicase-primase in complex with ssDNA, dTTP, AC dinucleotide and CTP (form I)
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA primase/helicase, MAGNESIUM ION, ...
Authors:Gao, Y, Cui, Y, Zhou, Z, Yang, W.
Deposit date:2018-11-27
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
6N7S
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BU of 6n7s by Molmil
Structure of bacteriophage T7 E343Q mutant gp4 helicase-primase in complex with ssDNA, dTTP, AC dinucleotide and CTP (form II)
Descriptor: DNA (25-MER), DNA primase/helicase, MAGNESIUM ION, ...
Authors:Gao, Y, Cui, Y, Zhou, Z, Yang, W.
Deposit date:2018-11-28
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
6N7V
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BU of 6n7v by Molmil
Structure of bacteriophage T7 gp4 (helicase-primase, E343Q mutant) in complex with ssDNA, dTTP, AC dinucleotide, and CTP (from multiple lead complexes)
Descriptor: DNA (93-MER), DNA primase/helicase, MAGNESIUM ION, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-11-28
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
5W34
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BU of 5w34 by Molmil
Crystal structure of the RNA polymerase domain (RPD) of Mycobacterium tuberculosis primase DnaG in complex with double-stranded DNA GACCGGAAGTGG
Descriptor: DNA oligomer 5'-CCACTTCCGGTC, DNA oligomer 5'-GACCGGAAGTGG, DNA primase
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2017-06-07
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structures of the Catalytic Domain of Bacterial Primase DnaG in Complexes with DNA Provide Insight into Key Priming Events.
Biochemistry, 57, 2018
5W33
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BU of 5w33 by Molmil
Crystal structure of the RNA polymerase domain (RPD) of Mycobacterium tuberculosis primase DnaG
Descriptor: DNA primase, SULFATE ION
Authors:Hou, C, Biswas, T, Tsodikov, O.V.
Deposit date:2017-06-07
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structures of the Catalytic Domain of Bacterial Primase DnaG in Complexes with DNA Provide Insight into Key Priming Events.
Biochemistry, 57, 2018
5W35
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BU of 5w35 by Molmil
Crystal structure of the RNA polymerase domain (RPD) of Mycobacterium tuberculosis primase DnaG in complex with a double-stranded DNA oligomer with a 1-nucleotide overhang
Descriptor: DNA primase, synthetic DNA oligomer 5'-CCACTTCCGGTC, synthetic DNA oligomer 5'-TGACCGGAAGTGG
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2017-06-07
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Structures of the Catalytic Domain of Bacterial Primase DnaG in Complexes with DNA Provide Insight into Key Priming Events.
Biochemistry, 57, 2018
5W36
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BU of 5w36 by Molmil
Crystal structure of the RNA polymerase domain (RPD) of Mycobacterium tuberculosis primase DnaG in complex with a double-stranded DNA oligomer with a 6-nucleotide overhang
Descriptor: DNA primase, STRONTIUM ION, synthetic DNA 5'-TATCGTCCCGCCTC
Authors:Hou, C, Tsodikov, O.V.
Deposit date:2017-06-07
Release date:2018-03-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structures of the Catalytic Domain of Bacterial Primase DnaG in Complexes with DNA Provide Insight into Key Priming Events.
Biochemistry, 57, 2018
2V1C
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BU of 2v1c by Molmil
Crystal structure and mutational study of RecOR provide insight into its role in DNA repair
Descriptor: HYPOTHETICAL PROTEIN, RECOMBINATION PROTEIN RECR, ZINC ION
Authors:Timmins, J, Leiros, I, McSweeney, S.
Deposit date:2007-05-23
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal Structure and Mutational Study of Recor Provide Insight Into its Mode of DNA Binding.
Embo J., 26, 2007
6N7I
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BU of 6n7i by Molmil
Structure of bacteriophage T7 E343Q mutant gp4 helicase-primase in complex with ssDNA, dTTP, AC dinucleotide and CTP (gp4(5)-DNA)
Descriptor: DNA (25-MER), DNA primase/helicase, MAGNESIUM ION, ...
Authors:Gao, Y, Cui, Y, Zhou, Z, Yang, W.
Deposit date:2018-11-27
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
6N7T
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BU of 6n7t by Molmil
Structure of bacteriophage T7 E343Q mutant gp4 helicase-primase in complex with ssDNA, dTTP, AC dinucleotide and CTP (form III)
Descriptor: DNA (25-MER), DNA primase/helicase, MAGNESIUM ION, ...
Authors:Gao, Y, Cui, Y, Zhou, Z, Yang, W.
Deposit date:2018-11-28
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
5GUJ
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BU of 5guj by Molmil
Crystal structure of the Bacillus subtilis DnaG RNA Polymerase Domain, natural degradation of full length DnaG
Descriptor: DNA primase
Authors:Zhou, Y, Liu, Z, Wang, G.
Deposit date:2016-08-29
Release date:2017-04-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insight into the Specific DNA Template Binding to DnaG primase in Bacteria
Sci Rep, 7, 2017
4E2K
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BU of 4e2k by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain
Descriptor: BENZAMIDINE, DNA primase
Authors:Rymer, R.U, Solorio, F.A, Clement, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-08
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012
4EDR
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BU of 4edr by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain bound to UTP and Manganese
Descriptor: BENZAMIDINE, DNA primase, MANGANESE (II) ION, ...
Authors:Rymer, R.U, Solorio, F.A, Chu, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-27
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012
4EDT
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BU of 4edt by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain bound to ppGpp and Manganese
Descriptor: BENZAMIDINE, DNA primase, GUANOSINE-5',3'-TETRAPHOSPHATE, ...
Authors:Rymer, R.U, Solorio, F.A, Chu, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-27
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.005 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012
4EDV
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BU of 4edv by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain bound to pppGpp and Manganese
Descriptor: BENZAMIDINE, DNA primase, MANGANESE (II) ION, ...
Authors:Rymer, R.U, Solorio, F.A, Chu, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-27
Release date:2012-07-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012
4EDG
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BU of 4edg by Molmil
The structure of the S. aureus DnaG RNA Polymerase Domain bound to ATP and Manganese
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, BENZAMIDINE, DNA primase, ...
Authors:Rymer, R.U, Solorio, F.A, Chu, C, Corn, J.E, Wang, J.D, Berger, J.M.
Deposit date:2012-03-27
Release date:2012-07-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Binding Mechanism of Metal-NTP Substrates and Stringent-Response Alarmones to Bacterial DnaG-Type Primases.
Structure, 20, 2012

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