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PDB: 81 results

8PRY
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BU of 8pry by Molmil
Crystal structure of Trypanosoma cruzi glycerol kinase
Descriptor: GLYCEROL, glycerol kinase
Authors:Lipinski, O, Sonani, R.R, Dubin, G.
Deposit date:2023-07-12
Release date:2024-07-24
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of glycerol kinase from Trypanosoma cruzi, a potential molecular target in Chagas disease.
Acta Crystallogr D Struct Biol, 80, 2024
8Y1T
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BU of 8y1t by Molmil
CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI GAMBIENSE GLYCEROL KINASE COMPLEX WITH ADP and G3P
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Glycerol kinase, ...
Authors:Balogun, E.O, Inaoka, D.K, Ichinose, M, Chishima, T, Harada, S, Kita, K, Shiba, T.
Deposit date:2024-01-25
Release date:2025-01-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CRYSTAL STRUCTURE OF TRYPANOSOMA BRUCEI GAMBIENSE GLYCEROL KINASE COMPLEX WITH ADP and G3P
To Be Published
5GN6
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BU of 5gn6 by Molmil
Crystal structure of glycerol kinase from Trypanosoma brucei gambiense complexed with cumarin derivative-17b
Descriptor: 4-butyl-7,8-bis(oxidanyl)chromen-2-one, GLYCEROL, Glycerol kinase
Authors:Balogun, E.O, Inaoka, D.K, Shiba, T, Tsuge, T, May, B, Sato, T, Kido, Y, Takeshi, N, Aoki, T, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Michels, P.A.M, Watanabe, Y, Moore, A.L, Harada, S, Kita, K.
Deposit date:2016-07-19
Release date:2017-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of trypanocidal coumarins with dual inhibition of both the glycerol kinase and alternative oxidase ofTrypanosoma brucei brucei.
Faseb J., 33, 2019
4E1J
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BU of 4e1j by Molmil
Crystal structure of glycerol kinase in complex with glycerol from Sinorhizobium meliloti 1021
Descriptor: CHLORIDE ION, GLYCEROL, Glycerol kinase, ...
Authors:Agarwal, R, Chamala, S, Evans, B, Foti, R, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Siedel, R, Villigas, G, Zencheck, W, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-03-06
Release date:2012-03-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystal structure of glycerol kinase in complex with glycerol from Sinorhizobium meliloti 1021
To be Published
5YA2
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BU of 5ya2 by Molmil
Crystal structure of LsrK-HPr complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Autoinducer-2 kinase, HEXANE-1,6-DIOL, ...
Authors:Ryu, K.S, Ha, J.H.
Deposit date:2017-08-30
Release date:2018-07-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Evidence of link between quorum sensing and sugar metabolism inEscherichia colirevealed via cocrystal structures of LsrK and HPr
Sci Adv, 4, 2018
7NIE
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BU of 7nie by Molmil
putative glycerol kinase-like proteins anchored on an array of voltage dependent anion channels in the outer mitochondrial membrane of pig sperm mitochondria
Descriptor: Glycerol kinase, Voltage-dependent anion-selective channel protein 2
Authors:Leung, M.R, Zeev-Ben-Mordehai, T.
Deposit date:2021-02-12
Release date:2021-10-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (35 Å)
Cite:In-cell structures of conserved supramolecular protein arrays at the mitochondria-cytoskeleton interface in mammalian sperm.
Proc.Natl.Acad.Sci.USA, 118, 2021
2ZF5
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BU of 2zf5 by Molmil
Crystal Structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon
Descriptor: Glycerol kinase
Authors:Koga, Y, Katsumi, R, You, D.-J, Matsumura, H, Takano, K, Kanaya, S.
Deposit date:2007-12-20
Release date:2008-05-06
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of highly thermostable glycerol kinase from a hyperthermophilic archaeon in a dimeric form
Febs J., 275, 2008
1XUP
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BU of 1xup by Molmil
ENTEROCOCCUS CASSELIFLAVUS GLYCEROL KINASE COMPLEXED WITH GLYCEROL
Descriptor: GLYCEROL, Glycerol kinase
Authors:Yeh, J.I, Charrier, V, Paulo, J, Hou, L, Darbon, E, Hol, W.G.J, Deutscher, J.
Deposit date:2004-10-26
Release date:2004-12-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structures of Enterococcal Glycerol Kinase in the Absence and Presence of Glycerol: Correlation of Conformation to Substrate Binding and a Mechanism of Activation by Phosphorylation
Biochemistry, 43, 2004
5VM1
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BU of 5vm1 by Molmil
Crystal structure of a xyloylose kinase from Brucella ovis
Descriptor: Xylulokinase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-04-26
Release date:2017-05-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of a xyloylose kinase from
To Be Published
2NLX
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BU of 2nlx by Molmil
Crystal structure of the apo E. coli xylulose kinase
Descriptor: Xylulose kinase
Authors:di Luccio, E, Voegtli, J, Wilson, D.K.
Deposit date:2006-10-20
Release date:2006-11-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and kinetic studies of induced fit in xylulose kinase from Escherichia coli.
J.Mol.Biol., 365, 2007
6UDE
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BU of 6ude by Molmil
Crystal structure of Glycerol kinase from Elizabethkingia anophelis NUHP1 in complex with ADP and glycerol
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Glycerol kinase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-09-19
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of Glycerol kinase from Elizabethkingia anophelis NUHP1 in complex with ADP and glycerol
TO BE PUBLISHED
2ITM
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BU of 2itm by Molmil
Crystal structure of the E. coli xylulose kinase complexed with xylulose
Descriptor: AMMONIUM ION, D-XYLULOSE, SULFATE ION, ...
Authors:di Luccio, E, Voegtli, J, Wilson, D.K.
Deposit date:2006-10-19
Release date:2006-11-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and kinetic studies of induced fit in xylulose kinase from Escherichia coli.
J.Mol.Biol., 365, 2007
3D7E
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BU of 3d7e by Molmil
Enterococcus casseliflavus glycerol kinase mutant HIS232ALA complexed with glycerol
Descriptor: GLYCEROL, Glycerol kinase
Authors:Yeh, J.I, Vahedi-Faridi, A.
Deposit date:2008-05-21
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation
Biochemistry, 48, 2009
3QDK
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BU of 3qdk by Molmil
Structural insight on mechanism and diverse substrate selection strategy of ribulokinase
Descriptor: L-ribulose, Ribulokinase
Authors:Agarwal, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-01-18
Release date:2011-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural insight into mechanism and diverse substrate selection strategy of L-ribulokinase.
Proteins, 80, 2012
1R59
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BU of 1r59 by Molmil
Enterococcus casseliflavus glycerol kinase
Descriptor: Glycerol kinase
Authors:Yeh, J.I, Charrier, V, Paulo, J, Hou, L, Darbon, E, Claiborne, A, Hol, W.G, Deutscher, J.
Deposit date:2003-10-09
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of Enterococcal Glycerol Kinase in the Absence and Presence of Glycerol: Correlation of conformation to substrate binding and a mechanism of activation by phosphorylation
Biochemistry, 43, 2004
5YA1
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BU of 5ya1 by Molmil
crystal structure of LsrK-HPr complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Autoinducer-2 kinase, HEXANE-1,6-DIOL, ...
Authors:Ryu, K.S, Ha, J.H.
Deposit date:2017-08-29
Release date:2018-07-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Evidence of link between quorum sensing and sugar metabolism inEscherichia colirevealed via cocrystal structures of LsrK and HPr
Sci Adv, 4, 2018
3EZW
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BU of 3ezw by Molmil
Crystal Structure of a Hyperactive Escherichia coli Glycerol Kinase Mutant Gly230 --> Asp Obtained Using Microfluidic Crystallization Devices
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Anderson, M.J, DeLaBarre, B, Dunten, P, Brunger, A.T, Quake, S.R.
Deposit date:2008-10-23
Release date:2008-11-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a hyperactive Escherichia coli glycerol kinase mutant Gly230 --> Asp obtained using microfluidic crystallization devices.
Biochemistry, 46, 2007
3FLC
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BU of 3flc by Molmil
Crystal structure of the His-tagged H232R mutant of glycerol kinase from Enterococcus casseliflavus with glycerol
Descriptor: GLYCEROL, Glycerol kinase, SULFATE ION
Authors:Briozzo, P.
Deposit date:2008-12-18
Release date:2009-01-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Characterizations of Glycerol Kinase: Unraveling Phosphorylation-Induced Long-Range Activation
Biochemistry, 2008
5YA0
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BU of 5ya0 by Molmil
Crystal structure of LsrK and HPr complex
Descriptor: Autoinducer-2 kinase, HEXANE-1,6-DIOL, PHOSPHATE ION, ...
Authors:Ryu, K.S, Ha, J.H.
Deposit date:2017-08-29
Release date:2018-07-11
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.997 Å)
Cite:Evidence of link between quorum sensing and sugar metabolism inEscherichia colirevealed via cocrystal structures of LsrK and HPr
Sci Adv, 4, 2018
5AZI
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BU of 5azi by Molmil
Crystal structure of glycerol kinase from Trypanosoma brucei gambiense complexed with 4NP
Descriptor: 4-NITROPHENYL PHOSPHATE, GLYCEROL, Glycerol kinase
Authors:Balogun, E.O, Inaoka, D.K, Shiba, T, Tokuoka, S.M, Tokumasu, F, Sakamoto, K, Michels, P.A.M, Harada, S, Kita, K.
Deposit date:2015-10-08
Release date:2016-10-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Glycerol kinase of African trypanosomes possesses an intrinsic phosphatase activity.
Biochim Biophys Acta Gen Subj, 1861, 2017
5AZJ
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BU of 5azj by Molmil
Crystal structure of glycerol kinase from Trypanosoma brucei gambiense complexed with 4NP (with disulfide bridge)
Descriptor: 4-NITROPHENYL PHOSPHATE, GLYCEROL, Glycerol kinase
Authors:Balogun, E.O, Inaoka, D.K, Shiba, T, Tokuoka, S.M, Tokumasu, F, Sakamoto, K, Michels, P.A.M, Harada, S, Kita, K.
Deposit date:2015-10-08
Release date:2016-10-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Glycerol kinase of African trypanosomes possesses an intrinsic phosphatase activity.
Biochim Biophys Acta Gen Subj, 1861, 2017
3KZB
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BU of 3kzb by Molmil
Crystal structure of xylulokinase from Chromobacterium violaceum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Xylulokinase
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-12-08
Release date:2010-03-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Crystal structure of xylulokinase from Chromobacterium violaceum
To be Published
3LL3
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BU of 3ll3 by Molmil
The crystal structure of ligand bound xylulose kinase from Lactobacillus acidophilus
Descriptor: 1-DEOXY-D-XYLULOSE-5-PHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhang, Z, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-01-28
Release date:2010-03-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:The crystal structure of xylulose kinase from Lactobacillus acidophilus
To be Published
2UYT
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BU of 2uyt by Molmil
Structure of L-rhamnulose kinase in complex with ADP and beta-L- rhamnulose.
Descriptor: 6-deoxy-beta-L-fructofuranose, ADENOSINE-5'-DIPHOSPHATE, RHAMNULOKINASE
Authors:Grueninger, D, Schulz, G.E.
Deposit date:2007-04-13
Release date:2007-06-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Substrate Spectrum of L-Rhamnulose Kinase Related to Models Derived from Two Ternary Complex Structures.
FEBS Lett., 581, 2007
2W40
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BU of 2w40 by Molmil
Crystal structure of Plasmodium falciparum glycerol kinase with bound glycerol
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, GLYCEROL KINASE, ...
Authors:Schnick, C, Polley, S.D, Fivelman, Q.L, Ranford-Cartwright, L, Wilkinson, S.R, Brannigan, J.A, Wilkinson, A.J, Baker, D.A.
Deposit date:2008-11-18
Release date:2008-12-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure and Non-Essential Function of Glycerol Kinase in Plasmodium Falciparum Blood Stages.
Mol.Microbiol., 71, 2009

 

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