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PDB: 225 results

1KMJ
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E. coli NifS/CsdB protein at 2.0A with the cysteine persulfide intermediate (residue CSS).
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2001-12-16
Release date:2001-12-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Analysis of the E. coli NifS CsdB protein at 2.0 A reveals the structural basis for perselenide and persulfide intermediate formation.
J.Mol.Biol., 315, 2002
3A9X
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Crystal structure of rat selenocysteine lyase
Descriptor: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-08
Release date:2010-03-16
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
6XDK
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BU of 6xdk by Molmil
Crystal structure of Phosphoserine aminotransferase (SerC) from Stenotrophomonas maltophilia K279a
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-06-10
Release date:2020-06-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Phosphoserine aminotransferase (SerC) from Stenotrophomonas maltophilia K279a
to be published
4XK1
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Crystal Structure of a Phosphoserine/phosphohydroxythreonine Aminotransferase (PSAT) from Pseudomonas aeruginosa with cofactor Pyridoxal Phosphate and bound Glutamate
Descriptor: FORMIC ACID, GLUTAMIC ACID, Phosphoserine aminotransferase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-01-09
Release date:2015-02-04
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal Structure of a Phosphoserine/phosphohydroxythreonine Aminotransferase (PSAT) from Pseudomonas aeruginosa with cofactor Pyridoxal Phosphate and bound Glutamate
to be published
7MHV
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Crystal Structure of Cysteine desulfurase NifS from Legionella pneumophila Philadelphia 1 in complex with pyridoxal 5'-phosphate
Descriptor: 1,2-ETHANEDIOL, Cysteine desulfurase, PHOSPHATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-04-15
Release date:2021-05-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Cysteine desulfurase NifS from Legionella pneumophila Philadelphia 1 in complex with pyridoxal 5'-phosphate
to be published
8ZTP
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Crystal structure of cysteine desulfurase Sufs from Mycoplasma Pneumonia
Descriptor: PYRIDOXAL-5'-PHOSPHATE, cysteine desulfurase
Authors:Wang, W.M, Ma, D.Y, Gong, W.J, Yao, H, Liu, Y.H, Wang, H.F.
Deposit date:2024-06-07
Release date:2024-12-11
Last modified:2024-12-18
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The reduced interaction between SufS and SufU in Mycoplasma penetrans results in diminished sulfotransferase activity.
Int.J.Biol.Macromol., 284, 2024
8DL5
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Crystal structure of PLP-dependent Mannich cyclase LolT
Descriptor: Aminotransferase, class V/Cysteine desulfurase, GLYCEROL
Authors:Gao, J, Hai, Y.
Deposit date:2022-07-06
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A pyridoxal 5'-phosphate-dependent Mannich cyclase.
Nat Catal, 2023
1T3I
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BU of 1t3i by Molmil
Structure of slr0077/SufS, the Essential Cysteine Desulfurase from Synechocystis PCC 6803
Descriptor: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, Probable cysteine desulfurase, ...
Authors:Tirupati, B, Vey, J.L, Drennan, C.L, Bollinger Jr, J.M.
Deposit date:2004-04-26
Release date:2004-09-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Kinetic and structural characterization of Slr0077/SufS, the essential cysteine desulfurase from Synechocystis sp. PCC 6803.
Biochemistry, 43, 2004
8D8S
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SufS from Staphylococcus aureus
Descriptor: 1,2-ETHANEDIOL, Cysteine desulfurase
Authors:Morrison, C.N, Boncella, A.E, Lunin, V.
Deposit date:2022-06-08
Release date:2022-12-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.388 Å)
Cite:Structural and Biochemical Characterization of Staphylococcus aureus Cysteine Desulfurase Complex SufSU.
Acs Omega, 7, 2022
8I28
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Structure of Phosphoserine Aminotransferase from Saccharomyces cerevisiae
Descriptor: Phosphoserine aminotransferase
Authors:Jang, J.Y, Chang, J.H.
Deposit date:2023-01-14
Release date:2023-05-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular Structure of Phosphoserine Aminotransferase from Saccharomyces cerevisiae.
Int J Mol Sci, 24, 2023
5DB5
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Crystal structure of PLP-bound E. coli SufS (cysteine persulfide intermediate) in space group P21
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, CYSTEINE, ...
Authors:Arbing, M.A, Shin, A, Koo, C.W, Medrano-Soto, A, Eisenberg, D.
Deposit date:2015-08-20
Release date:2016-08-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of PLP-bound E. coli SufS (cysteine persulfide intermediate) in space group P21
To Be Published
8A5V
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Crystal structure of the human phosposerine aminotransferase (PSAT)
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Phosphoserine aminotransferase, SULFATE ION
Authors:Costanzi, E, Demitri, N, Ullah, R, Marchesan, F, Peracchi, A, Zangelmi, E, Storici, P, Campanini, B.
Deposit date:2022-06-16
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:L-serine biosynthesis in the human central nervous system: Structure and function of phosphoserine aminotransferase.
Protein Sci., 32, 2023
8A5W
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Crystal structure of the human phosphoserine aminotransferase (PSAT) in complex with O-phosphoserine
Descriptor: (2S)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-phosphonooxy-propanoic acid, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, PHOSPHOSERINE, ...
Authors:Costanzi, E, Demitri, N, Ullah, R, Marchesan, F, Peracchi, A, Zangelmi, E, Storici, P, Campanini, B.
Deposit date:2022-06-16
Release date:2023-03-29
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:L-serine biosynthesis in the human central nervous system: Structure and function of phosphoserine aminotransferase.
Protein Sci., 32, 2023
4LW2
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Structural changes during cysteine desulfurase CsdA and sulfur-acceptor CsdE interactions provide insight into the trans-persulfuration
Descriptor: Cysteine sulfinate desulfinase, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
Authors:Kim, S, Park, S.Y.
Deposit date:2013-07-26
Release date:2013-08-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural changes during cysteine desulfurase CsdA and sulfur acceptor CsdE interactions provide insight into the trans-persulfuration.
J.Biol.Chem., 288, 2013
6RV1
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human Alanine:Glyoxylate Aminotransferase major allele (AGT-Ma)
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Serine--pyruvate aminotransferase
Authors:Giardina, G, Cutruzzola, F, Cellini, B, Mirco, D.
Deposit date:2019-05-30
Release date:2020-04-08
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cycloserine enantiomers are reversible inhibitors of human alanine:glyoxylate aminotransferase: implications for Primary Hyperoxaluria type 1.
Biochem.J., 476, 2019
7MKV
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Engineered PLP-dependent decarboxylative aldolase from Aspergillus flavus, UstD2.0, bound as the internal aldimine
Descriptor: Cysteine desulfurase-like protein ustD
Authors:Ellis, J.M, Buller, A.R, Bingman, C.A.
Deposit date:2021-04-27
Release date:2022-05-04
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Biocatalytic synthesis of non-standard amino acids by a decarboxylative aldol reaction
Nat Catal, 5, 2022
3VAX
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Crystal structure of DndA from streptomyces lividans
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein dndA
Authors:Zhang, Z, Chen, F, Lin, K, Wu, G.
Deposit date:2011-12-30
Release date:2013-01-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the cysteine desulfurase DndA from Streptomyces lividans which is involved in DNA phosphorothioation
Plos One, 7, 2012
3VOM
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Structure of a putative phosphoserine aminotransferase from mycobacterium tuberculosis
Descriptor: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, Putative phosphoserine aminotransferase, ...
Authors:Coulibaly, F, Lassalle, E, Baker, H.M, Baker, E.N.
Deposit date:2012-01-30
Release date:2012-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of phosphoserine aminotransferase from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.D, 68, 2012
5OFY
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BU of 5ofy by Molmil
Crystal structure of the D183N variant of human Alanine:Glyoxylate Aminotransferase major allele (AGT-Ma) at pH 9.0. 2.8 Ang; internal aldimine with PLP in the active site
Descriptor: 1,4-DIETHYLENE DIOXIDE, PYRIDOXAL-5'-PHOSPHATE, Serine--pyruvate aminotransferase
Authors:Giardina, G, Cutruzzola, F, Borri Voltattorni, C, Cellini, B, Montioli, R.
Deposit date:2017-07-11
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Radiation damage at the active site of human alanine:glyoxylate aminotransferase reveals that the cofactor position is finely tuned during catalysis.
Sci Rep, 7, 2017
7NS7
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BU of 7ns7 by Molmil
Human L-alanine:glyoxylate aminotransferase minor allele variant: AGXT-Mi (P11L-I340M)
Descriptor: L-alanine:glyoxylate aminotransferase
Authors:Cellini, B, Dindo, M.
Deposit date:2021-03-05
Release date:2022-03-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural dynamics shape the fitness window of alanine:glyoxylate aminotransferase.
Protein Sci., 31, 2022
6RV0
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human Alanine:Glyoxylate Aminotransferase major allele (AGT-Ma); with PMP in the active site
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Serine--pyruvate aminotransferase
Authors:Giardina, G, Cutruzzola, F, Cellini, B, Mirco, D.
Deposit date:2019-05-30
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cycloserine enantiomers are reversible inhibitors of human alanine:glyoxylate aminotransferase: implications for Primary Hyperoxaluria type 1.
Biochem.J., 476, 2019
5OG0
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Crystal structure of human Alanine:Glyoxylate Aminotransferase major allele (AGT-Ma) at 2.5 Angstrom; internal aldimine with PLP in the active site
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Serine--pyruvate aminotransferase
Authors:Giardina, G, Cutruzzola, F, Borri Voltattorni, C, Cellini, B, Montioli, R.
Deposit date:2017-07-11
Release date:2017-09-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Radiation damage at the active site of human alanine:glyoxylate aminotransferase reveals that the cofactor position is finely tuned during catalysis.
Sci Rep, 7, 2017
3CAI
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Crystal structure of Mycobacterium tuberculosis Rv3778c protein
Descriptor: POSSIBLE AMINOTRANSFERASE
Authors:Covarrubias, A.S, Larsson, A.M, Jones, T.A, Bergfors, T, Mowbray, S.L, Unge, T.
Deposit date:2008-02-20
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and biochemical function studies of Mycobacterium tuberculosis essential protein Rv3778c
To be published
3E77
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Human phosphoserine aminotransferase in complex with PLP
Descriptor: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, Phosphoserine aminotransferase
Authors:Lehtio, L, Karlberg, T, Andersson, J, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Thorsell, S.G, Tresaugues, L, Van Den Berg, S, Welin, M, Wikstrom, M, Wisniewska, M, Weigelt, J, Schueler, H, Structural Genomics Consortium (SGC)
Deposit date:2008-08-18
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human phosphoserine aminotransferase in complex with PLP
TO BE PUBLISHED
4Q76
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Crystal structure of Nfs2 C384S mutant, the plastidial cysteine desulfurase from Arabidopsis thaliana
Descriptor: Cysteine desulfurase 2, chloroplastic
Authors:Roret, T, Didierjean, C.
Deposit date:2014-04-24
Release date:2014-09-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray structures of Nfs2, the plastidial cysteine desulfurase from Arabidopsis thaliana.
Acta Crystallogr F Struct Biol Commun, 70, 2014

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