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PDB: 93 results

7AFT
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BU of 7aft by Molmil
Cryo-EM structure of the signal sequence-engaged post-translational Sec translocon
Descriptor: Mating factor alpha-1,Mating factor alpha-1, Protein translocation protein SEC63, Protein transport protein SBH1, ...
Authors:Weng, T.-H, Beatrix, B, Berninghausen, O, Becker, T, Cheng, J, Beckmann, R.
Deposit date:2020-09-20
Release date:2020-12-02
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Architecture of the active post-translational Sec translocon.
Embo J., 40, 2021
6JZB
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BU of 6jzb by Molmil
Structural characterization of DnaJ from Streptococcus pneumonia presents a new tetramer of Hsp40 family
Descriptor: Chaperone protein DnaJ, ZINC ION
Authors:Zhu, M, Zhu, Z.L.
Deposit date:2019-04-30
Release date:2020-11-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.754 Å)
Cite:Structural insights into the formation of oligomeric state by a type I Hsp40 chaperone.
Biochimie, 176, 2020
7KAO
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BU of 7kao by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore mutant, class without Sec62
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAQ
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BU of 7kaq by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore mutant, class with Sec62, conformation 2 (C2)
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAJ
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BU of 7kaj by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, wild-type, class with Sec62, conformation 2 (C2)
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAS
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BU of 7kas by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, Sec63 FN3 mutant, class with Sec62
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAT
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BU of 7kat by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore ring and Sec63 FN3 double mutant, class without Sec62
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAH
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BU of 7kah by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, wild-type, class without Sec62
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-02-03
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAI
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BU of 7kai by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, wild-type, class with Sec62, conformation 1 (C1)
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAR
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BU of 7kar by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, Sec63 FN3 mutant, class without Sec62
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAU
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BU of 7kau by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore ring and Sec63 FN3 double mutant, class with Sec62
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KAP
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BU of 7kap by Molmil
Cryo-EM structure of the Sec complex from S. cerevisiae, Sec61 pore mutant, class with Sec62, conformation 1 (C1)
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
7KB5
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BU of 7kb5 by Molmil
Cryo-EM structure of the Sec complex from yeast, Sec63 FN3 and residues 210-216 mutated
Descriptor: Protein translocation protein SEC63, Protein transport protein SBH1, Protein transport protein SEC61, ...
Authors:Itskanov, S, Park, E.
Deposit date:2020-10-01
Release date:2021-01-06
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Stepwise gating of the Sec61 protein-conducting channel by Sec63 and Sec62.
Nat.Struct.Mol.Biol., 28, 2021
4WB7
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BU of 4wb7 by Molmil
Crystal structure of a chimeric fusion of human DnaJ (Hsp40) and cAMP-dependent protein kinase A (catalytic alpha subunit)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha, PKI (5-24), ...
Authors:Cheung, J, Ginter, C, Cassidy, M, Franklin, M.C, Rudolph, M.J, Hendrickson, W.A.
Deposit date:2014-09-02
Release date:2015-01-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into mis-regulation of protein kinase A in human tumors.
Proc.Natl.Acad.Sci.USA, 112, 2015
7TGH
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BU of 7tgh by Molmil
Cryo-EM structure of respiratory super-complex CI+III2 from Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
Authors:Zhou, L, Maldonado, M, Padavannil, A, Guo, F, Letts, J.A.
Deposit date:2022-01-07
Release date:2022-04-06
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structures of Tetrahymena 's respiratory chain reveal the diversity of eukaryotic core metabolism.
Science, 376, 2022
5NRO
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BU of 5nro by Molmil
Structure of full-length DnaK with bound J-domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chaperone protein DnaJ, Chaperone protein DnaK, ...
Authors:Kopp, J, Kityk, R, Mayer, M.P.
Deposit date:2017-04-25
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Molecular Mechanism of J-Domain-Triggered ATP Hydrolysis by Hsp70 Chaperones.
Mol. Cell, 69, 2018
5Y88
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BU of 5y88 by Molmil
Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, Intron lariat, ...
Authors:Wan, R, Yan, C, Bai, R, Lei, J, Shi, Y.
Deposit date:2017-08-20
Release date:2018-08-01
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structure of an Intron Lariat Spliceosome from Saccharomyces cerevisiae
Cell(Cambridge,Mass.), 171, 2017
6BYR
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BU of 6byr by Molmil
Structures of the PKA RI alpha holoenzyme with the FLHCC driver J-PKAc alpha or native PKAc alpha
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha chimera, MAGNESIUM ION, ...
Authors:Cao, B, Lu, T.W, Martinez Fiesco, J.A, Tomasini, M, Fan, L, Simon, S.M, Taylor, S.S, Zhang, P.
Deposit date:2017-12-21
Release date:2019-04-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.661 Å)
Cite:Structures of the PKA RI alpha Holoenzyme with the FLHCC Driver J-PKAc alpha or Wild-Type PKAc alpha.
Structure, 27, 2019
8B6F
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BU of 8b6f by Molmil
Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2022-09-27
Release date:2023-03-29
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8BQS
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BU of 8bqs by Molmil
Cryo-EM structure of the I-II-III2-IV2 respiratory supercomplex from Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
Authors:Muhleip, A, Kock Flygaard, R, Baradaran, R, Amunts, A.
Deposit date:2022-11-21
Release date:2023-08-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of mitochondrial membrane bending by I-II-III2-IV2 supercomplex
To Be Published
5AYK
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BU of 5ayk by Molmil
Crystal structure of ERdj5 form I
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, CHLORIDE ION, DnaJ homolog subfamily C member 10
Authors:Watanabe, S, Maegawa, K, Inaba, K.
Deposit date:2015-08-22
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation
To Be Published
8GYM
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BU of 8gym by Molmil
Cryo-EM structure of Tetrahymena thermophila respiratory mega-complex MC IV2+(I+III2+II)2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L.
Deposit date:2022-09-23
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae.
Nat Commun, 14, 2023
8GZU
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BU of 8gzu by Molmil
Cryo-EM structure of Tetrahymena thermophila respiratory Megacomplex MC (IV2+I+III2+II)2
Descriptor: 2 iron, 2 sulfur cluster-binding protein, 2-oxoglutarate/malate carrier protein, ...
Authors:Wu, M.C, Hu, Y.Q, Han, F.Z, Zhou, L.
Deposit date:2022-09-27
Release date:2023-06-14
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:Structures of Tetrahymena thermophila respiratory megacomplexes on the tubular mitochondrial cristae.
Nat Commun, 14, 2023
5AYL
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BU of 5ayl by Molmil
Crystal structure of ERdj5 form II
Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, DnaJ homolog subfamily C member 10
Authors:Watanabe, S, Maegawa, K, Inaba, K.
Deposit date:2015-08-22
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation
To Be Published
6YXY
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BU of 6yxy by Molmil
State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Descriptor: 12S ribosomal RNA, ADENOSINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Jaskolowski, M, Ramrath, D.J.F, Bieri, P, Niemann, M, Mattei, S, Calderaro, S, Leibundgut, M.A, Horn, E.K, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2020-05-04
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis.
Mol.Cell, 79, 2020

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PDB entries from 2024-08-14

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