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PDB: 558 results

2HQZ
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BU of 2hqz by Molmil
Crystal structure of L42H design intermediate for GFP metal ion reporter
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-07-19
Release date:2008-04-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
8ZUS
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BU of 8zus by Molmil
Crystal structure of the F99S/M153T/V163A/T203V variant of GFP at pH 7.5
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Takeda, R, Takeda, K.
Deposit date:2024-06-10
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural characterization of green fluorescent protein in the I-state.
Sci Rep, 14, 2024
8ZUR
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BU of 8zur by Molmil
Crystal structure of the F99S/M153T/V163A/T203V/E222Q variant of GFP at pH 5.0
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Takeda, R, Takeda, K.
Deposit date:2024-06-10
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural characterization of green fluorescent protein in the I-state.
Sci Rep, 14, 2024
8ZUP
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BU of 8zup by Molmil
Crystal structure of the F99S/M153T/V163A/T203V/E222Q variant of GFP at pH 8.5
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Takeda, R, Takeda, K.
Deposit date:2024-06-10
Release date:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural characterization of green fluorescent protein in the I-state.
Sci Rep, 14, 2024
4L1I
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BU of 4l1i by Molmil
Crystal structure of EGFP-based Calcium Sensor CatchER complexed with Ca
Descriptor: CALCIUM ION, EGFP-based Calcium Sensor CatchER
Authors:Zhang, Y, Weber, I.T.
Deposit date:2013-06-03
Release date:2013-12-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural basis for a hand-like site in the calcium sensor CatchER with fast kinetics.
Acta Crystallogr.,Sect.D, 69, 2013
2G2S
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BU of 2g2s by Molmil
Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P.
Deposit date:2006-02-16
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
2QZ0
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BU of 2qz0 by Molmil
Mature Q183E variant of Green Fluorescent Protein Chromophore
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-08-15
Release date:2009-04-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the GFP Fluorophore Biosynthesis Pathway
To be Published
2DUH
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BU of 2duh by Molmil
crystal structure of a green fluorescent protein variant S65T/H148N at pH 9.5
Descriptor: Green fluorescent protein
Authors:Shu, X, Remington, S.J.
Deposit date:2006-07-23
Release date:2007-07-10
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies.
Biochemistry, 46, 2007
2HFC
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BU of 2hfc by Molmil
Structure of S65T Y66F R96A GFP variant in precursor state
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-23
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
4GES
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BU of 4ges by Molmil
crystal structure of GFP-TYR151PYZ with an unnatural amino acid incorporation
Descriptor: Green fluorescent protein
Authors:Dong, J, Liu, X, Li, J, Wang, J, Gong, W.
Deposit date:2012-08-02
Release date:2012-08-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Genetic incorporation of a metal-chelating amino Acid as a probe for protein electron transfer.
Angew.Chem.Int.Ed.Engl., 51, 2012
3DQ7
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BU of 3dq7 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 1: Structure 17 in a Series of 26 High Pressure Structures
Descriptor: Green fluorescent protein
Authors:Barstow, B, Kim, C.U.
Deposit date:2008-07-09
Release date:2008-09-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4AR7
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BU of 4ar7 by Molmil
X-ray structure of the cyan fluorescent protein mTurquoise
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Noirclerc-Savoye, M, Goedhart, J, Gadella, T.W.J, Royant, A.
Deposit date:2012-04-21
Release date:2012-08-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Structure of a Fluorescent Protein from Aequorea Victoria Bearing the Obligate-Monomer Mutation A206K.
Acta Crystallogr.,Sect.F, 68, 2012
2DUE
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BU of 2due by Molmil
crystal structure of a green fluorescent protein variant S65T/H148D at pH 10
Descriptor: Green fluorescent protein
Authors:Shu, X, Remington, S.J.
Deposit date:2006-07-23
Release date:2007-07-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Ultrafast excited-state dynamics in the green fluorescent protein variant S65T/H148D. 1. Mutagenesis and structural studies.
Biochemistry, 46, 2007
5DQB
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BU of 5dqb by Molmil
Green/cyan WasCFP at pH 8.0
Descriptor: GLYCEROL, SODIUM ION, WasCFP_pH2
Authors:Pletnev, V, Pletneva, N, Pletnev, S.
Deposit date:2015-09-14
Release date:2016-07-27
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore
Russ.J.Bioorganic Chem., 42 (6), 2016
4XOW
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BU of 4xow by Molmil
Structure of rsGreen0.7 in the green-on-state
Descriptor: rsGreen0.7
Authors:De Zitter, E, Van Meervelt, L.
Deposit date:2015-01-16
Release date:2015-09-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Expression-Enhanced Fluorescent Proteins Based on Enhanced Green Fluorescent Protein for Super-resolution Microscopy.
Acs Nano, 9, 2015
6OFL
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BU of 6ofl by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-ClY); ih circular permutant (50-51)
Descriptor: Green fluorescent protein (GFP); S65T, Y66(3-ClY); ih circular permutant (50-51)
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2019-03-31
Release date:2019-07-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
2HJO
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BU of 2hjo by Molmil
Crystal structure of V224H design intermediate for GFP metal ion reporter
Descriptor: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-06-30
Release date:2008-04-08
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter
To be Published
2FZU
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BU of 2fzu by Molmil
Reduced enolate chromophore intermediate for GFP variant
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
Deposit date:2006-02-10
Release date:2006-03-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
4J8A
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BU of 4j8a by Molmil
Irradiated-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 145
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
Deposit date:2013-02-14
Release date:2013-05-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
6IR7
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BU of 6ir7 by Molmil
Green fluorescent protein variant GFPuv with the modification to 6-hydroxynorleucine at the C-terminus
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-HYDROXY-L-NORLEUCINE, Green fluorescent protein, ...
Authors:Nakatani, T, Yasui, N, Yamashita, A.
Deposit date:2018-11-12
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.277 Å)
Cite:Specific modification at the C-terminal lysine residue of the green fluorescent protein variant, GFPuv, expressed in Escherichia coli.
Sci Rep, 9, 2019
3SSH
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BU of 3ssh by Molmil
Engineered high-affinity halide-binding protein derived from YFP: chloride complex
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
Deposit date:2011-07-08
Release date:2012-07-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.277 Å)
Cite:Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
5NI3
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BU of 5ni3 by Molmil
sfGFP 204-204 mutant dimer
Descriptor: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
Authors:Worthy, H.L, Rizkallah, P.J.
Deposit date:2017-03-23
Release date:2018-09-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Association of Fluorescent Protein Pairs and Its Significant Impact on Fluorescence and Energy Transfer
Adv Sci, 2020
5OX8
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BU of 5ox8 by Molmil
Structure of Enhanced Cyan Fluorescent Protein at pH 5.0
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Gotthard, G, von Stetten, D, Clavel, D, Noirclerc-Savoye, M, Royant, A.
Deposit date:2017-09-06
Release date:2017-11-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Chromophore Isomer Stabilization Is Critical to the Efficient Fluorescence of Cyan Fluorescent Proteins.
Biochemistry, 56, 2017
3LA1
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BU of 3la1 by Molmil
High resolution crystal structure of CyPet mutant A167I
Descriptor: Green fluorescent protein, SODIUM ION
Authors:Hu, X.
Deposit date:2010-01-06
Release date:2011-01-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystal Structure of CyPet
To be Published
6HUT
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BU of 6hut by Molmil
GFP8 - a stabilized variant of cycle-3 GFP
Descriptor: Green fluorescent protein
Authors:Petek, M, Rangel Pereira, M.
Deposit date:2018-10-09
Release date:2020-01-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:GFP8 - a stabilized variant of cycle-3 GFP
To Be Published

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PDB entries from 2024-11-13

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