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PDB: 86 results

8C8F
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BU of 8c8f by Molmil
Crystal structure of the E. coli maltodextrin-binding protein
Descriptor: DI(HYDROXYETHYL)ETHER, Maltose/maltodextrin-binding periplasmic protein
Authors:Marquez Espinoza, A, Rodrigues, M.J, Olieric, V, Freisinger, E.
Deposit date:2023-01-19
Release date:2023-02-22
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of the E. coli maltodextrin-binding protein
To Be Published
8SVY
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BU of 8svy by Molmil
MBP-Mcl1 in complex with ligand 10
Descriptor: (15P)-17-chloro-33-fluoro-12-[(2-methoxyethoxy)methyl]-5,14,22-trimethyl-28-oxa-9-thia-5,6,13,14,22-pentaazaheptacyclo[27.7.1.1~4,7~.0~11,15~.0~16,21~.0~20,24~.0~30,35~]octatriaconta-1(36),4(38),6,11(15),12,16,18,20,23,29(37),30,32,34-tridecaene-23-carboxylic acid, 1,2-ETHANEDIOL, GLYCEROL, ...
Authors:Miller, B.R, Shaffer, P.
Deposit date:2023-05-17
Release date:2023-08-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Macrocyclic Carbon-Linked Pyrazoles As Novel Inhibitors of MCL-1.
Acs Med.Chem.Lett., 14, 2023
8ETB
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BU of 8etb by Molmil
the crystal structure of a rationally designed zinc sensor based on maltose binding protein - Zn binding conformation
Descriptor: ACETATE ION, ZINC ION, Zinc Sensor protein
Authors:Zhao, Z, Zhou, M, Zemerov, S.D, Marmorstein, R, Dmochowski, I.J.
Deposit date:2022-10-16
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Rational design of a genetically encoded NMR zinc sensor.
Chem Sci, 14, 2023
6QXJ
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BU of 6qxj by Molmil
Structure of MBP-Mcl-1 in complex with compound 6a
Descriptor: (2~{R})-2-[[6-ethyl-5-(1~{H}-indol-5-yl)thieno[2,3-d]pyrimidin-4-yl]amino]propanoic acid, Maltose-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1, SODIUM ION, ...
Authors:Dokurno, P, Szlavik, Z, Ondi, L, Csekei, M, Paczal, A, Szabo, Z.B, Radics, G, Murray, J, Davidson, J, Chen, I, Davis, B, Hubbard, R.E, Pedder, C, Surgenor, A.E, Smith, J, Robertson, A, LeToumelin-Braizat, G, Cauquil, N, Zarka, M, Demarles, D, Perron-Sierra, F, Geneste, O, Kotschy, A.
Deposit date:2019-03-07
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-Guided Discovery of a Selective Mcl-1 Inhibitor with Cellular Activity.
J.Med.Chem., 62, 2019
4XHS
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BU of 4xhs by Molmil
Crystal structure of human NLRP12 PYD domain and implication in homotypic interaction
Descriptor: FORMIC ACID, Maltose-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 12, ...
Authors:Jin, T, Huang, M, Jiang, J, Xiao, T.
Deposit date:2015-01-06
Release date:2016-01-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of human NLRP12 PYD domain and implication in homotypic interaction
To Be Published
6N84
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BU of 6n84 by Molmil
MBP-fusion protein of transducin-alpha residues 327-350
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Guanine nucleotide-binding protein G(t) subunit alpha-2, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Srivastava, D, Gakhar, L, Artemyev, N.O.
Deposit date:2018-11-28
Release date:2019-07-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural underpinnings of Ric8A function as a G-protein alpha-subunit chaperone and guanine-nucleotide exchange factor.
Nat Commun, 10, 2019
6QGD
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BU of 6qgd by Molmil
Structure of human Mcl-1 in complex with thienopyrimidine inhibitor
Descriptor: 2-[(6-ethyl-5-phenyl-thieno[2,3-d]pyrimidin-4-yl)amino]-3-oxidanyl-propanoic acid, Maltose-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1, SODIUM ION, ...
Authors:Dokurno, P, Murray, J, Davidson, J, Chen, I, Davis, B, Graham, C.J, Harris, R, Jordan, A.M, Matassova, N, Pedder, C, Ray, S, Roughley, S, Smith, J, Walmsley, C, Wang, Y, Whitehead, N, Williamson, D.S, Casara, P, Le Diguarher, T, Hickman, J, Stark, J, Kotschy, A, Geneste, O, Hubbard, R.E.
Deposit date:2019-01-11
Release date:2019-06-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Establishing Drug Discovery and Identification of Hit Series for the Anti-apoptotic Proteins, Bcl-2 and Mcl-1.
Acs Omega, 4, 2019
4WGI
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BU of 4wgi by Molmil
A Single Diastereomer of a Macrolactam Core Binds Specifically to Myeloid Cell Leukemia 1 (MCL1)
Descriptor: (2S)-2-[(2S,3R)-10-{[(4-fluorophenyl)sulfonyl]amino}-3-methyl-2-[(methyl{[4-(trifluoromethyl)phenyl]carbamoyl}amino)methyl]-6-oxo-3,4-dihydro-2H-1,5-benzoxazocin-5(6H)-yl]propanoic acid, FORMIC ACID, MAGNESIUM ION, ...
Authors:Clifton, M.C, Fairman, J.W, Fang, C, D'Souza, B, Fulroth, B, Leed, A, McCarren, P, Wang, L, Wang, Y, Kaushik, V, Palmer, M, Wei, G, Golub, T.R, Hubbard, B.K, Serrano-Wu, M.H.
Deposit date:2014-09-18
Release date:2014-11-19
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Single Diastereomer of a Macrolactam Core Binds Specifically to Myeloid Cell Leukemia 1 (MCL1).
Acs Med.Chem.Lett., 5, 2014
3OSQ
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BU of 3osq by Molmil
Maltose-bound maltose sensor engineered by insertion of circularly permuted green fluorescent protein into E. coli maltose binding protein at position 175
Descriptor: Maltose-binding periplasmic protein,Green fluorescent protein, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Echevarria, I.M, Marvin, J.S, Looger, L.L, Schreiter, E.R.
Deposit date:2010-09-09
Release date:2011-10-26
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A genetically encoded, high-signal-to-noise maltose sensor.
Proteins, 79, 2011
4WVI
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BU of 4wvi by Molmil
Crystal structure of the Type-I signal peptidase from Staphylococcus aureus (SpsB) in complex with a substrate peptide (pep2).
Descriptor: Maltose-binding periplasmic protein,Signal peptidase IB, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, substrate peptide (pep2)
Authors:Young, P.G, Ting, Y.T, Baker, E.N.
Deposit date:2014-11-05
Release date:2015-09-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Peptide binding to a bacterial signal peptidase visualized by peptide tethering and carrier-driven crystallization.
IUCrJ, 3, 2016
8F23
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BU of 8f23 by Molmil
The crystal structure of a rationally designed zinc sensor based on maltose binding protein - Apo conformation
Descriptor: Zinc Sensor protein
Authors:Zhao, Z, Zhou, M, Zemerov, S.d, Marmorstein, R, Dmochowski, I.J.
Deposit date:2022-11-06
Release date:2023-03-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Rational design of a genetically encoded NMR zinc sensor.
Chem Sci, 14, 2023
5C7R
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BU of 5c7r by Molmil
Revealing surface waters on an antifreeze protein by fusion protein crystallography
Descriptor: Fusion protein of Maltose-binding periplasmic protein and Type-3 ice-structuring protein HPLC 12, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Sun, T, Gauthier, S, Campbell, R.L, Davies, P.L.
Deposit date:2015-06-24
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Revealing Surface Waters on an Antifreeze Protein by Fusion Protein Crystallography Combined with Molecular Dynamic Simulations.
J.Phys.Chem.B, 119, 2015
4WVJ
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BU of 4wvj by Molmil
Crystal structure of the Type-I signal peptidase from Staphylococcus aureus (SpsB) in complex with an inhibitor peptide (pep3).
Descriptor: Maltose-binding periplasmic protein,Signal peptidase IB, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, inhibitor peptide (PEP3)
Authors:Young, P.G, Ting, Y.T, Baker, E.N.
Deposit date:2014-11-05
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Peptide binding to a bacterial signal peptidase visualized by peptide tethering and carrier-driven crystallization.
IUCrJ, 3, 2016
5BJZ
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BU of 5bjz by Molmil
Crystal structure of maltose binding protein in complex with an allosteric synthetic antibody
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:Mukherjee, S, Kossiakoff, A.A.
Deposit date:2017-09-12
Release date:2018-01-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Engineered synthetic antibodies as probes to quantify the energetic contributions of ligand binding to conformational changes in proteins.
J. Biol. Chem., 293, 2018
5T0A
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BU of 5t0a by Molmil
Crystal Structure of Heparan Sulfate 6-O-Sulfotransferase with bound PAP and heptasaccharide substrate
Descriptor: 1,2-ETHANEDIOL, 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, ...
Authors:Pedersen, L.C, Moon, A.F, Krahn, J.M, Liu, J.
Deposit date:2016-08-15
Release date:2017-02-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure Based Substrate Specificity Analysis of Heparan Sulfate 6-O-Sulfotransferases.
ACS Chem. Biol., 12, 2017
5T05
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BU of 5t05 by Molmil
Crystal structure of heparan sulfate 6-O-sulfotransferase with bound PAP and IdoA2S containing hexasaccharide substrate
Descriptor: 1,2-ETHANEDIOL, 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, ...
Authors:Pedersen, L.C, Moon, A.F, krahn, J.M, Liu, J.
Deposit date:2016-08-15
Release date:2017-02-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.952 Å)
Cite:Structure Based Substrate Specificity Analysis of Heparan Sulfate 6-O-Sulfotransferases.
ACS Chem. Biol., 12, 2017
4XA2
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BU of 4xa2 by Molmil
Structure of the Major Type IV pilin of Acinetobacter baumannii
Descriptor: 1,2-ETHANEDIOL, Maltose-binding periplasmic protein,MBP-PilA: c, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Piepenbrink, K.H, Sundberg, E.J.
Deposit date:2014-12-12
Release date:2016-01-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structure of the Major Type IV pilin of Acinetobacter baumannii
To Be Published
3OSR
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BU of 3osr by Molmil
Maltose-bound maltose sensor engineered by insertion of circularly permuted green fluorescent protein into E. coli maltose binding protein at position 311
Descriptor: Maltose-binding periplasmic protein,Green fluorescent protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Echevarria, I.M, Marvin, J.S, Looger, L.L, Schreiter, E.R.
Deposit date:2010-09-09
Release date:2011-10-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:A genetically encoded, high-signal-to-noise maltose sensor.
Proteins, 79, 2011
4YS9
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BU of 4ys9 by Molmil
Ataxin-3 Carboxy-Terminal Region - Crystal C1 (tetragonal)
Descriptor: Maltose-binding periplasmic protein, Ataxin-3 chimera, ZINC ION, ...
Authors:Zhemkov, V.A, Kim, M.
Deposit date:2015-03-16
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.2-Angstrom resolution crystal structure of the carboxy-terminal region of ataxin-3.
FEBS Open Bio, 6, 2016
5GPP
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BU of 5gpp by Molmil
Crystal structure of zebrafish ASC PYD domain
Descriptor: ACETATE ION, Maltose-binding periplasmic protein,Apoptosis-associated speck-like protein containing a CARD, SULFATE ION, ...
Authors:Jin, T, Li, Y.
Deposit date:2016-08-04
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Functional and structural characterization of zebrafish ASC.
FEBS J., 285, 2018
6YBK
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BU of 6ybk by Molmil
Structure of MBP-Mcl-1 in complex with compound 4d
Descriptor: (2~{R})-2-[5-[3-chloranyl-2-methyl-4-[2-(4-methylpiperazin-1-yl)ethoxy]phenyl]-6-(4-fluorophenyl)thieno[2,3-d]pyrimidin-4-yl]oxy-3-[2-(pyrazin-2-ylmethoxy)phenyl]propanoic acid, CHLORIDE ION, Maltose/maltodextrin-binding periplasmic protein,Induced myeloid leukemia cell differentiation protein Mcl-1, ...
Authors:Dokurno, P, Surgenor, A.E, Murray, J.B.
Deposit date:2020-03-17
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of S64315, a Potent and Selective Mcl-1 Inhibitor.
J.Med.Chem., 63, 2020
5II4
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BU of 5ii4 by Molmil
Crystal structure of red abalone VERL repeat 1 with linker at 2.0 A resolution
Descriptor: Maltose-binding periplasmic protein,Vitelline envelope sperm lysin receptor, TRIETHYLENE GLYCOL, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Sadat Al-Hosseini, H, Raj, I, Nishimura, K, Jovine, L.
Deposit date:2016-03-01
Release date:2017-06-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Egg Coat-Sperm Recognition at Fertilization.
Cell, 169, 2017
5TTD
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BU of 5ttd by Molmil
Minor pilin FctB from S. pyogenes with engineered intramolecular isopeptide bond
Descriptor: FORMIC ACID, Maltose-binding periplasmic protein,Pilin isopeptide linkage domain protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Young, P.G, Kwon, H, Squire, C.J, Baker, E.N.
Deposit date:2016-11-02
Release date:2017-03-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Engineering a Lys-Asn isopeptide bond into an immunoglobulin-like protein domain enhances its stability.
Sci Rep, 7, 2017
5BMY
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BU of 5bmy by Molmil
Crystal structure of hPin1 WW domain (5-21) fused with maltose-binding protein
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2015-05-25
Release date:2016-10-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural studies of the N-terminal fragments of the WW domain: Insights into co-translational folding of a beta-sheet protein
Sci Rep, 6, 2016
5JON
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BU of 5jon by Molmil
Crystal structure of the unliganded form of HCN2 CNBD
Descriptor: Maltose-binding periplasmic protein,Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2, NITRATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Klenchin, V.A, Chanda, B.
Deposit date:2016-05-02
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.042 Å)
Cite:Structure and dynamics underlying elementary ligand binding events in human pacemaking channels.
Elife, 5, 2016

 

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