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PDB: 50 results

2EBO
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BU of 2ebo by Molmil
CORE STRUCTURE OF GP2 FROM EBOLA VIRUS
Descriptor: CHLORIDE ION, EBOLA VIRUS ENVELOPE GLYCOPROTEIN
Authors:Malashkevich, V.N, Schneider, B.J, Mcnally, M.L, Milhollen, M.A, Pang, J.X, Kim, P.S.
Deposit date:1998-12-24
Release date:1999-05-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Core structure of the envelope glycoprotein GP2 from Ebola virus at 1.9-A resolution.
Proc.Natl.Acad.Sci.USA, 96, 1999
6HS4
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BU of 6hs4 by Molmil
Crystal structure of Ebolavirus glycoprotein in complex with inhibitor 118
Descriptor: 1-[2-[3-oxidanyl-4-(4-phenyl-1~{H}-pyrazol-5-yl)phenoxy]ethyl]piperidine-4-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Ren, J, Zhao, Y, Stuart, D.I.
Deposit date:2018-09-28
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure-Based in Silico Screening Identifies a Potent Ebolavirus Inhibitor from a Traditional Chinese Medicine Library.
J.Med.Chem., 62, 2019
6F5U
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BU of 6f5u by Molmil
CRYSTAL STRUCTURE OF EBOLAVIRUS GLYCOPROTEIN IN COMPLEX WITH BEPRIDIL
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Bepridil, DIMETHYL SULFOXIDE, ...
Authors:Ren, J, Zhao, Y, Fry, E.E, Stuart, D.I.
Deposit date:2017-12-03
Release date:2018-01-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Target Identification and Mode of Action of Four Chemically Divergent Drugs against Ebolavirus Infection.
J. Med. Chem., 61, 2018
6F6N
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BU of 6f6n by Molmil
CRYSTAL STRUCTURE OF EBOLAVIRUS GLYCOPROTEIN IN COMPLEX WITH SERTRALINE
Descriptor: (1S,4S)-4-(3,4-dichlorophenyl)-N-methyl-1,2,3,4-tetrahydronaphthalen-1-amine, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Ren, J, Zhao, Y, Fry, E.E, Stuart, D.I.
Deposit date:2017-12-05
Release date:2018-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Target Identification and Mode of Action of Four Chemically Divergent Drugs against Ebolavirus Infection.
J. Med. Chem., 61, 2018
6G9I
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BU of 6g9i by Molmil
Crystal structure of Ebolavirus glycoprotein in complex with clomipramine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(3-CHLORO-5H-DIBENZO[B,F]AZEPIN-5-YL)-N,N-DIMETHYLPROPAN-1-AMINE, Envelope glycoprotein,Envelope glycoprotein, ...
Authors:Zhao, Y, Ren, J, Fry, E.E, Xiao, J, Townsend, A.R, Stuart, D.I.
Deposit date:2018-04-10
Release date:2018-05-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structures of Ebola Virus Glycoprotein Complexes with Tricyclic Antidepressant and Antipsychotic Drugs.
J. Med. Chem., 61, 2018
5JQ3
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BU of 5jq3 by Molmil
Crystal structure of Ebola glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein 1,Envelope glycoprotein 1,Envelope glycoprotein 1, Envelope glycoprotein 2, ...
Authors:Zhao, Y, Ren, J, Stuart, D.I.
Deposit date:2016-05-04
Release date:2016-06-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Toremifene interacts with and destabilizes the Ebola virus glycoprotein.
Nature, 535, 2016
7SSQ
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BU of 7ssq by Molmil
Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075231
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-11-11
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075231
to be published
6G9B
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BU of 6g9b by Molmil
Crystal structure of Ebolavirus glycoprotein in complex with imipramine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(5H-DIBENZO[B,F]AZEPIN-5-YL)-N,N-DIMETHYLPROPAN-1-AMINE, ...
Authors:Zhao, Y, Ren, J, Fry, E.E, Xiao, J, Townsend, A.R, Stuart, D.I.
Deposit date:2018-04-10
Release date:2018-05-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structures of Ebola Virus Glycoprotein Complexes with Tricyclic Antidepressant and Antipsychotic Drugs.
J. Med. Chem., 61, 2018
7JPI
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BU of 7jpi by Molmil
Crystal structure of EBOV glycoprotein with modified HR2 stalk at 2.3A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, ...
Authors:Chaudhary, A, Stanfield, R.L, Wilson, I.A, Zhu, J.
Deposit date:2020-08-08
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Single-component multilayered self-assembling nanoparticles presenting rationally designed glycoprotein trimers as Ebola virus vaccines.
Nat Commun, 12, 2021
6F6S
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BU of 6f6s by Molmil
CRYSTAL STRUCTURE OF EBOLAVIRUS GLYCOPROTEIN IN COMPLEX WITH benztropine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, Envelope glycoprotein, ...
Authors:Ren, J, Zhao, Y, Fry, E.E, Stuart, D.I.
Deposit date:2017-12-06
Release date:2018-01-03
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Target Identification and Mode of Action of Four Chemically Divergent Drugs against Ebolavirus Infection.
J. Med. Chem., 61, 2018
6HRO
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BU of 6hro by Molmil
Crystal structure of Ebolavirus glycoprotein in complex with inhibitor 118a
Descriptor: 1-[2-[4-[4-(4-chlorophenyl)-3-methyl-1~{H}-pyrazol-5-yl]-3-oxidanyl-phenoxy]ethyl]piperidin-1-ium-4-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Ren, J, Zhao, Y, Stuart, D.I.
Deposit date:2018-09-27
Release date:2019-02-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based in Silico Screening Identifies a Potent Ebolavirus Inhibitor from a Traditional Chinese Medicine Library.
J.Med.Chem., 62, 2019
6G95
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BU of 6g95 by Molmil
Crystal structure of Ebolavirus glycoprotein in complex with thioridazine
Descriptor: 10-{2-[(2R)-1-methylpiperidin-2-yl]ethyl}-2-(methylsulfanyl)-10H-phenothiazine, 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, ...
Authors:Zhao, Y, Ren, J, Fry, E.E, Xiao, J, Townsend, A.R, Stuart, D.I.
Deposit date:2018-04-10
Release date:2018-05-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structures of Ebola Virus Glycoprotein Complexes with Tricyclic Antidepressant and Antipsychotic Drugs.
J. Med. Chem., 61, 2018
7LYD
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BU of 7lyd by Molmil
Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075146
Descriptor: (1R,3S,5S,7S)-N-[(1r,4R)-4-aminocyclohexyl]-3-[(methylsulfanyl)methyl]-5-phenyladamantane-1-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-03-06
Release date:2021-11-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075146
to be published
6F6I
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BU of 6f6i by Molmil
CRYSTAL STRUCTURE OF EBOLAVIRUS GLYCOPROTEIN IN COMPLEX WITH PAROXETINE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, Envelope glycoprotein, ...
Authors:Ren, J, Zhao, Y, Fry, E.E, Stuart, D.I.
Deposit date:2017-12-05
Release date:2018-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Target Identification and Mode of Action of Four Chemically Divergent Drugs against Ebolavirus Infection.
J. Med. Chem., 61, 2018
7SSR
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BU of 7ssr by Molmil
Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075093
Descriptor: (1R,2s,3S,5s,7s)-N-[(1r,4r)-4-(aminomethyl)cyclohexyl]-5-phenyladamantane-2-carboxamide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-11-11
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075093
to be published
8DPL
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BU of 8dpl by Molmil
Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2.1.1D5 heavy chain variable domain, 2.1.1D5 light chain variable domain, ...
Authors:Yu, X, Saphire, E.O.
Deposit date:2022-07-15
Release date:2023-07-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:The evolution and determinants of neutralization of potent head-binding antibodies against Ebola virus.
Cell Rep, 42, 2023
8F87
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BU of 8f87 by Molmil
Crystal structure of Ebola Zaire envelope glycoprotein GP in complex with compound ARN75092
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, GP1, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-11-21
Release date:2023-11-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Ebola Zaire envelope glycoprotein GP in complex with compound ARN75092
To be Published
5JQB
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BU of 5jqb by Molmil
Crystal structure of Ebola glycoprotein in complex with ibuprofen
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein 1,Envelope glycoprotein 1,Envelope glycoprotein 1, Envelope glycoprotein 2, ...
Authors:Zhao, Y, Ren, J, Stuart, D.I.
Deposit date:2016-05-04
Release date:2016-06-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Toremifene interacts with and destabilizes the Ebola virus glycoprotein.
Nature, 535, 2016
5JQ7
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BU of 5jq7 by Molmil
Crystal structure of Ebola glycoprotein in complex with toremifene
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DIMETHYL SULFOXIDE, Envelope glycoprotein 1,Envelope glycoprotein 1,Envelope glycoprotein 1, ...
Authors:Zhao, Y, Ren, J, Stuart, D.I.
Deposit date:2016-05-04
Release date:2016-06-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Toremifene interacts with and destabilizes the Ebola virus glycoprotein.
Nature, 535, 2016
7M2D
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BU of 7m2d by Molmil
Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0074953
Descriptor: (1R,3S,5R,7R)-N-[(1r,4R)-4-aminocyclohexyl]-3-(ethoxymethyl)-5-phenyladamantane-1-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, GP1, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-03-16
Release date:2021-11-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0074953
to be published
7LYY
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BU of 7lyy by Molmil
Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075164
Descriptor: (1s,3R,5S,7s)-N-[(1r,4r)-4-aminocyclohexyl]-3,5-diphenyladamantane-1-carboxamide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2021-03-08
Release date:2021-11-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structure of Ebola zaire Envelope glycoprotein GP in complex with compound ARN0075164
to be published
6NAE
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BU of 6nae by Molmil
Crystal Structure of Ebola zaire GP protein with bound ARN0074898
Descriptor: (1S,3R,5R,7S)-N-(trans-4-aminocyclohexyl)-3-methyl-5-phenyltricyclo[3.3.1.1~3,7~]decane-1-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Discovery of Adamantane Carboxamides as Ebola Virus Cell Entry and Glycoprotein Inhibitors.
Acs Med.Chem.Lett., 11, 2020
6S8J
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BU of 6s8j by Molmil
Structure of ZEBOV GP in complex with 5T0180 antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope Glycoprotein 1, Envelope glycoprotein, ...
Authors:Diskin, R, Cohen-Dvashi, H.
Deposit date:2019-07-10
Release date:2020-02-12
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural Basis for a Convergent Immune Response against Ebola Virus.
Cell Host Microbe, 27, 2020
6S8I
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BU of 6s8i by Molmil
Structure of ZEBOV GP in complex with 3T0265 antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein, Enveloped Glycoprotein 1, ...
Authors:Diskin, R, Cohen-Dvashi, H.
Deposit date:2019-07-10
Release date:2020-02-12
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Structural Basis for a Convergent Immune Response against Ebola Virus.
Cell Host Microbe, 27, 2020
1EBO
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BU of 1ebo by Molmil
CRYSTAL STRUCTURE OF THE EBOLA VIRUS MEMBRANE-FUSION SUBUNIT, GP2, FROM THE ENVELOPE GLYCOPROTEIN ECTODOMAIN
Descriptor: CHLORIDE ION, EBOLA VIRUS ENVELOPE PROTEIN CHIMERA CONSISTING OF A FRAGMENT OF GCN4 ZIPPER CLONED N-TERMINAL TO A FRAGMENT OF GP2, ZINC ION
Authors:Weissenhorn, W, Carfi, A, Lee, K.H, Skehel, J.J, Wiley, D.C.
Deposit date:1998-11-03
Release date:1999-07-02
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the Ebola virus membrane fusion subunit, GP2, from the envelope glycoprotein ectodomain.
Mol.Cell, 2, 1998

 

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