PDB: 221051 resultsInfo pagesStatus searchChemie searchBIRD

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8T46	Transporter associated with antigen processing (TAP) in the apo state Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2 Authors: Lee, J, Oldham, M.L, Chen, J. Deposit date: 2023-06-08 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Principles of peptide selection by the transporter associated with antigen processing. Proc.Natl.Acad.Sci.USA, 121, 2024
8BTM	Structural and functional studies of geldanamycin amide synthase ShGdmF Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GdmF Authors: Ewert, W, Zeilinger, C, Kirschning, A, Preller, M. Deposit date: 2022-11-29 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structural and functional studies of geldanamycin amide synthase ShGdmF To Be Published
8CBK	Structure of human mitochondrial RNase P in complex with mitochondrial pre-tRNA-His(5,Ser) Descriptor: 3-hydroxyacyl-CoA dehydrogenase type-2, MAGNESIUM ION, Mitochondrial Precursor tRNA-His(5,Ser), ... Authors: MEYNIER, V, HARDWICK, S, CATALA, M, ROSKE, J, OERUM, S, CHIRGADZE, D, BARRAUD, P, LUISI, B, TISNE, C. Deposit date: 2023-01-25 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (2.76 Å) Cite: Structural basis for human mitochondrial tRNA maturation. Nat Commun, 15, 2024
8T4M	Closed human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 Authors: Burtscher, V, Mount, J, Cowgill, J, Chang, Y, Bickel, K, Yuan, P, Chanda, B. Deposit date: 2023-06-09 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3.16 Å) Cite: Structural Basis for Hyperpolarization-dependent Opening of the Human HCN1 Channel To Be Published
8T4N	DB1976 Bound to the DNA Sequence 5'-CGCGAATTCGCG-3 Descriptor: (2M,2'M)-2,2'-(selenophene-2,5-diyl)di(1H-benzimidazole-6-carboximidamide), DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') Authors: Terrell, J.R, Poon, G.M.K, Wilson, W.D. Deposit date: 2023-06-09 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Structural studies on the PU.1 inhibitory mechanism by diamidine minor groove binders To Be Published
8CBL	Structure of human mitochondrial RNase Z in complex with mitochondrial pre-tRNA-His(0,Ser) Descriptor: 3-hydroxyacyl-CoA dehydrogenase type-2, Mitochondrial Precursor tRNA-His(0,Ser), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... Authors: MEYNIER, V, HARDWICK, S, CATALA, M, ROSKE, J, OERUM, S, CHIRGADZE, D, BARRAUD, P, YU, W, LUISI, B, TISNE, C. Deposit date: 2023-01-25 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (2.79 Å) Cite: Structural basis for human mitochondrial tRNA maturation. Nat Commun, 15, 2024
8CBM	Structure of human mitochondrial CCA-adding enzyme in complex with mitochondrial pre-tRNA-Ile Descriptor: 3-hydroxyacyl-CoA dehydrogenase type-2, CCA tRNA nucleotidyltransferase 1, mitochondrial, ... Authors: MEYNIER, V, HARDWICK, S, CATALA, M, ROSKE, J, OERUM, S, CHIRGADZE, D, BARRAUD, P, LUISI, B, TISNE, C. Deposit date: 2023-01-25 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3.14 Å) Cite: Structural basis for human mitochondrial tRNA maturation. Nat Commun, 15, 2024
8T5W	Influenza PAN endonuclease I38T mutant with Baloxavir Descriptor: Baloxavir acid, MANGANESE (II) ION, Polymerase acidic protein Authors: Kohlbrand, A.J, Cohen, S.M. Deposit date: 2023-06-14 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural Studies of Inhibitors with Clinically Relevant Influenza Endonuclease Variants. Biochemistry, 63, 2024
8CBO	Structure of human mitochondrial MRPP1-MRPP2 in complex with mitochondrial pre-tRNA-Ile Descriptor: 3-hydroxyacyl-CoA dehydrogenase type-2, Mitochondrial Precursor tRNA-Ile(5,4), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... Authors: MEYNIER, V, HARDWICK, S, CATALA, M, ROSKE, J, OERUM, S, CHIRGADZE, D, BARRAUD, P, LUISI, B, TISNE, C. Deposit date: 2023-01-25 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Structural basis for human mitochondrial tRNA maturation. Nat Commun, 15, 2024
8TCD	Structure of Alistipes sp. 3-Keto-beta-glucopyranoside-1,2-Lyase AL1 Descriptor: ACETATE ION, COBALT (II) ION, GLYCEROL, ... Authors: Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J. Deposit date: 2023-06-30 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.9 Å) Cite: An alternative broad-specificity pathway for glycan breakdown in bacteria Nature, 2024
8CPL	YZw2 a scaffold for cryo-EM of small proteins of interest Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putrescine aminotransferase,Immunoglobulin G-binding protein A Authors: Moche, M, Friberg, O, Nygren, P.A, Nilvebrant, J. Deposit date: 2023-03-03 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.605 Å) Cite: Engineered imaging scaffolds for cryo-EM of small proteins of interest. To Be Published
8TCR	Structure of glucose bound Alistipes sp. 3-Keto-beta-glucopyranoside-1,2-Lyase AL1 Descriptor: COBALT (II) ION, MALONATE ION, Sugar phosphate isomerase, ... Authors: Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J. Deposit date: 2023-07-02 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (2.08 Å) Cite: An alternative broad-specificity pathway for glycan breakdown in bacteria Nature, 2024
8TCT	Structure of 3K-GlcH bound Bacteroides thetaiotaomicron 3-Keto-beta-glucopyranoside-1,2-Lyase BT1 Descriptor: 1,5-anhydro-D-ribo-hex-3-ulose, COBALT (II) ION, PHOSPHATE ION, ... Authors: Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J. Deposit date: 2023-07-02 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.86 Å) Cite: An alternative broad-specificity pathway for glycan breakdown in bacteria Nature, 2024
8CPR	G13D mutant of KRAS4b (2-169) bound to GDP with the switch-I in fully open conformation crystallized in sodium potassium phosphate buffer Descriptor: GTPase KRas, N-terminally processed, GUANOSINE-5'-DIPHOSPHATE, ... Authors: Moche, M, Jungholm, O, Strandback, E, Ampah-Korsah, H, Nyman, T, Orwar, O. Deposit date: 2023-03-03 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (2 Å) Cite: A G13D open-state-selective anti-KRAS antibody shows in vivo anti-cancer activity To Be Published
8TDA	Structure of Bacteroides thetaiotaomicron 3-Keto-2-hydroxy-glucal-hydratase BT2 Descriptor: POTASSIUM ION, Probable secreted glycosyl hydrolase Authors: Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J. Deposit date: 2023-07-02 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.46 Å) Cite: An alternative broad-specificity pathway for glycan breakdown in bacteria Nature, 2024
8F2Z	LSD1-CoREST in complex with AW2, short soaking Descriptor: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-([1,1'-biphenyl]-4-yl)-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name) Authors: Caroli, J, Mattevi, A. Deposit date: 2022-11-09 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (3 Å) Cite: Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1 to be published
8TDE	Structure of glucose bound Bacteroides thetaiotaomicron 3-Keto-2-hydroxy-glucal-hydratase BT2 Descriptor: POTASSIUM ION, Probable secreted glycosyl hydrolase, alpha-D-glucopyranose Authors: Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J. Deposit date: 2023-07-02 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.85 Å) Cite: An alternative broad-specificity pathway for glycan breakdown in bacteria Nature, 2024
8F30	LSD1-CoREST in complex with AW2, long soaking Descriptor: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-{5-[3-([1,1'-biphenyl]-4-yl)propanoyl]-7,8-dimethyl-2,4-dioxo-1,3,4,5-tetrahydrobenzo[g]pteridin-10(2H)-yl}-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name) Authors: Caroli, J, Mattevi, A. Deposit date: 2022-11-09 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1 to be published
8TDF	Structure of Alistipes sp. Glucoside-3-dehydrogenase AL3 Descriptor: Dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE Authors: Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J. Deposit date: 2023-07-02 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (2.1 Å) Cite: An alternative broad-specificity pathway for glycan breakdown in bacteria Nature, 2024
8F59	LSD1-CoREST in complex with AW2 and SNAG peptide Descriptor: Lysine-specific histone demethylase 1A, REST corepressor 1, Zinc finger protein SNAI1, ... Authors: Caroli, J, Mattevi, A. Deposit date: 2022-11-12 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1 to be published
8TDI	Structure of P2B11 Glucuronide-3-dehydrogenase Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, P2B11 Glucuronide-3-dehydrogenase, ... Authors: Lazarski, A.C, Worrall, L.J, Strynadka, N.C.J. Deposit date: 2023-07-03 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (2.6 Å) Cite: An alternative broad-specificity pathway for glycan breakdown in bacteria Nature, 2024
8F6S	LSD1-CoREST in complex with T105 Descriptor: 3-[(1R,2S)-2-(cyclobutylamino)cyclopropyl]-N-(5-methyl-1,3,4-thiadiazol-2-yl)benzamide, Lysine-specific histone demethylase 1A, REST corepressor 1, ... Authors: Caroli, J, Mattevi, A. Deposit date: 2022-11-17 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (2.91 Å) Cite: Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1 to be published
8FDV	LSD1-CoREST in complex N-formyl FAD and SNAG peptide Descriptor: Lysine-specific histone demethylase 1A, REST corepressor 1, Zinc finger protein SNAI1, ... Authors: Caroli, J, Mattevi, A. Deposit date: 2022-12-05 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1 to be published
8TDY	16mer self-complementary duplex RNA with D:U pair sequence 1 Descriptor: MAGNESIUM ION, RNA Authors: Fang, Z, Jia, X, Szostak, J.W. Deposit date: 2023-07-05 Release date: 2024-06-12 Method: X-RAY DIFFRACTION (1.66 Å) Cite: Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 2024
8HAT	NARROW LEAF 1-open from Japonica Descriptor: Protein NARROW LEAF 1 Authors: Zhang, S.J, He, Y.J, Wang, N, Zhang, W.J, Liu, C.M. Deposit date: 2022-10-26 Release date: 2024-06-12 Method: ELECTRON MICROSCOPY (3.03 Å) Cite: NARROW LEAF 1-open from Japonica To Be Published

 

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