Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5FEL
DownloadVisualize
BU of 5fel by Molmil
Hen egg lysozyme at room temperature solved from dataset acquired by oscillation method
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Tsujino, S, Tomizaki, T.
Deposit date:2015-12-17
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ultrasonic acoustic levitation for fast frame rate X-ray protein crystallography at room temperature.
Sci Rep, 6, 2016
6ET9
DownloadVisualize
BU of 6et9 by Molmil
Structure of the acetoacetyl-CoA-thiolase/HMG-CoA-synthase complex from Methanothermococcus thermolithotrophicus at 2.75 A
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Acetyl-CoA acetyltransferase thiolase, CHLORIDE ION, ...
Authors:Engilberge, S, Voegeli, B, Girard, E, Riobe, F, Maury, O, Erb, T.J, Shima, S, Wagner, T.
Deposit date:2017-10-25
Release date:2018-03-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Archaeal acetoacetyl-CoA thiolase/HMG-CoA synthase complex channels the intermediate via a fused CoA-binding site.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FAV
DownloadVisualize
BU of 6fav by Molmil
Crystal structure of C-terminal modified Tau peptide-hybrid 4.2f-I with 14-3-3sigma
Descriptor: (2~{R})-2-[(~{R})-(3-methoxyphenyl)-phenyl-methyl]pyrrolidine, 14-3-3 protein sigma, ACE-ARG-THR-PRO-SEP-LEU-PRO-GLY, ...
Authors:Andrei, S.A, Meijer, F.A, Ottmann, C, Milroy, L.G.
Deposit date:2017-12-18
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Inhibition of 14-3-3/Tau by Hybrid Small-Molecule Peptides Operating via Two Different Binding Modes.
ACS Chem Neurosci, 9, 2018
5FGW
DownloadVisualize
BU of 5fgw by Molmil
Structure of Sda1 nuclease with bound zinc ion
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Moon, A.F, Krahn, J.M, Xun, L, Cuneo, M.J, Pedersen, L.C.
Deposit date:2015-12-21
Release date:2016-03-30
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural characterization of the virulence factor Sda1 nuclease from Streptococcus pyogenes.
Nucleic Acids Res., 44, 2016
1KQS
DownloadVisualize
BU of 1kqs by Molmil
The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis
Descriptor: 23S RRNA, 5S RRNA, 6-AMINOHEXANOIC ACID, ...
Authors:Schmeing, T.M, Seila, A.C, Hansen, J.L, Freeborn, B, Soukup, J.K, Scaringe, S.A, Strobel, S.A, Moore, P.B, Steitz, T.A.
Deposit date:2002-01-07
Release date:2002-02-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits.
Nat.Struct.Biol., 9, 2002
4C3Y
DownloadVisualize
BU of 4c3y by Molmil
Crystal structure of 3-ketosteroid delta1-dehydrogenase from Rhodococcus erythropolis SQ1 in complex with 1,4-androstadiene-3,17- dione
Descriptor: 3-KETOSTEROID DEHYDROGENASE, ANDROSTA-1,4-DIENE-3,17-DIONE, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Rohman, A, van Oosterwijk, N, Thunnissen, A.M.W.H, Dijkstra, B.W.
Deposit date:2013-08-28
Release date:2013-11-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure and Site-Directed Mutagenesis of 3-Ketosteroid Delta1-Dehydrogenase from Rhodococcus Erythropolis Sq1 Explain its Catalytic Mechanism
J.Biol.Chem., 288, 2013
7ZNA
DownloadVisualize
BU of 7zna by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 5.2 in the presence of sodium at 100K
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZN8
DownloadVisualize
BU of 7zn8 by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 7.0 in the presence of sodium at 100K
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
Authors:Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
Deposit date:2022-04-20
Release date:2023-05-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
6B5E
DownloadVisualize
BU of 6b5e by Molmil
Mycobacterium tuberculosis RmlA in complex with dTDP-glucose
Descriptor: 1,2-ETHANEDIOL, 2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE, CHLORIDE ION, ...
Authors:Brown, H.A, Holden, H.M.
Deposit date:2017-09-29
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The structure of glucose-1-phosphate thymidylyltransferase from Mycobacterium tuberculosis reveals the location of an essential magnesium ion in the RmlA-type enzymes.
Protein Sci., 27, 2018
5GLK
DownloadVisualize
BU of 5glk by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compost microbial metagenome, calcium-free form.
Descriptor: ACETATE ION, GLYCEROL, Glycoside hydrolase family 43, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
1K9M
DownloadVisualize
BU of 1k9m by Molmil
Co-crystal structure of tylosin bound to the 50S ribosomal subunit of Haloarcula marismortui
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
Deposit date:2001-10-29
Release date:2002-07-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
5G4E
DownloadVisualize
BU of 5g4e by Molmil
S. enterica HisA mutant D10G, Dup13-15, Q24L, G102A, V106L
Descriptor: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, ACETIC ACID, GLYCEROL, ...
Authors:Soderholm, A, Guo, X, Newton, M, Nasvall, J, Duarte, F, Andersson, D, Patrick, W, Selmer, M.
Deposit date:2016-05-12
Release date:2017-04-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and functional innovations in the real-time evolution of new ( beta alpha )8 barrel enzymes.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3M1H
DownloadVisualize
BU of 3m1h by Molmil
Crystal Structure Analysis of the K3 Cleaved Adhesin Domain of Lys-gingipain (Kgp) from Porphyromonas gingivalis w83
Descriptor: CALCIUM ION, Lysine specific cysteine protease, SODIUM ION
Authors:Li, N, Collyer, C.A, Hunter, N.
Deposit date:2010-03-05
Release date:2011-03-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The modular structure of haemagglutinin/adhesin regions in gingipains of Porphyromonas gingivalis.
Mol.Microbiol., 81, 2011
1K73
DownloadVisualize
BU of 1k73 by Molmil
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Descriptor: 23S RRNA, 5S RRNA, ANISOMYCIN, ...
Authors:Hansen, J, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
Deposit date:2001-10-18
Release date:2003-07-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
4E0T
DownloadVisualize
BU of 4e0t by Molmil
Crystal structure of CdpNPT in its unbound state
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Cyclic dipeptide N-prenyltransferase, ...
Authors:Schuller, J.M, Zocher, G, Stehle, T.
Deposit date:2012-03-05
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure and catalytic mechanism of a cyclic dipeptide prenyltransferase with broad substrate promiscuity.
J.Mol.Biol., 422, 2012
3ZX2
DownloadVisualize
BU of 3zx2 by Molmil
NTPDase1 in complex with Decavanadate
Descriptor: ACETIC ACID, CHLORIDE ION, DECAVANADATE, ...
Authors:Zebisch, M, Schaefer, P, Straeter, N.
Deposit date:2011-08-04
Release date:2011-11-30
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Crystallographic Evidence for a Domain Motion in Rat Nucleoside Triphosphate Diphosphohydrolase (Ntpdase) 1.
J.Mol.Biol., 415, 2012
3N82
DownloadVisualize
BU of 3n82 by Molmil
T244A mutant of Human mitochondrial aldehyde dehydrogenase, NADH complex
Descriptor: 1,2-ETHANEDIOL, Aldehyde dehydrogenase, mitochondrial, ...
Authors:Gonzalez-Segura, L, Hurley, T.D.
Deposit date:2010-05-27
Release date:2011-04-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Conformational Selection During Catalysis: The role of Threonine 244 in ALDH2
To be published
4LCY
DownloadVisualize
BU of 4lcy by Molmil
Crystal structure of HLA-b46 at 1.6 angstrom resolution
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen, B-46 alpha chain, ...
Authors:Liu, J.X.
Deposit date:2013-06-24
Release date:2014-06-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure Analysis of the Human Leukocyte Antigen B*46:01
To be Published
3N83
DownloadVisualize
BU of 3n83 by Molmil
T244A mutant of human mitochondrial aldehyde dehydrogenase, NAD complex
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Aldehyde dehydrogenase, ...
Authors:Gonzalez-Segura, L, Hurley, T.D.
Deposit date:2010-05-27
Release date:2011-04-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational Selection During Catalysis: The role of Threonine 244 in ALDH2
To be published
6TF3
DownloadVisualize
BU of 6tf3 by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with Cordycepin 5-triphosphate (3-dATP)
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, Chains: A, MAGNESIUM ION, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2019-11-13
Release date:2020-09-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
1KD1
DownloadVisualize
BU of 1kd1 by Molmil
Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui
Descriptor: 23S RRNA, 5S RRNA, CADMIUM ION, ...
Authors:Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
Deposit date:2001-11-12
Release date:2002-07-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
4LFX
DownloadVisualize
BU of 4lfx by Molmil
X-ray structure of the adduct between hen egg white lysozyme and Auoxo6, a dinuclear gold(III) complex with -dioxo bridges linking the two metal centers
Descriptor: CHLORIDE ION, GOLD ION, Lysozyme C, ...
Authors:Vergara, A, Merlino, A.
Deposit date:2013-06-27
Release date:2013-10-02
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The mode of action of anticancer gold-based drugs: a structural perspective.
Chem.Commun.(Camb.), 49, 2013
4LFP
DownloadVisualize
BU of 4lfp by Molmil
X-ray structure of the adduct between hen egg white lysozyme and a homoleptic gold(I) complex with the saccharynate ligand
Descriptor: CHLORIDE ION, GOLD ION, Lysozyme C, ...
Authors:Vergara, A, Merlino, A.
Deposit date:2013-06-27
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The mode of action of anticancer gold-based drugs: a structural perspective.
Chem.Commun.(Camb.), 49, 2013
4LL2
DownloadVisualize
BU of 4ll2 by Molmil
Crystal structure of plant lectin with two metal binding sites from cicer arietinum at 2.6 angstrom resolution
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Lectin, ...
Authors:Kumar, S, Dube, D, Bhushan, A, Dey, S, Sharma, S, Singh, T.P.
Deposit date:2013-07-09
Release date:2013-10-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure plant lectinwith two metal binding sites from cicer arietinum at 2.6 angstrom resolution
TO BE PUBLISHED
3N9R
DownloadVisualize
BU of 3n9r by Molmil
Class II fructose-1,6-bisphosphate aldolase from helicobacter pylori in complex with N-(4-hydroxybutyl)-phosphoglycolohydroxamic acid, a competitive inhibitor
Descriptor: 2-[hydroxy(4-hydroxybutyl)amino]-2-oxoethyl dihydrogen phosphate, CHLORIDE ION, Fructose-bisphosphate aldolase, ...
Authors:Coincon, M, Sygusch, S.
Deposit date:2010-05-31
Release date:2010-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Rational Design, Synthesis, and Evaluation of New Selective Inhibitors of Microbial Class II (Zinc Dependent) Fructose Bis-phosphate Aldolases.
J.Med.Chem., 53, 2010

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon