Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3HWR
DownloadVisualize
BU of 3hwr by Molmil
Crystal structure of PanE/ApbA family ketopantoate reductase (YP_299159.1) from Ralstonia eutropha JMP134 at 2.15 A resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-dehydropantoate 2-reductase, BICINE, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-06-18
Release date:2009-06-30
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of PanE/ApbA family ketopantoate reductase (YP_299159.1) from Ralstonia eutropha JMP134 at 2.15 A resolution
To be published
6M7E
DownloadVisualize
BU of 6m7e by Molmil
Structure of bovine lactoperoxidase with multiple iodide ions in the distaline heme cavity.
Descriptor: 1-(OXIDOSULFANYL)METHANAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Maurya, A, Viswanathan, V, Pandey, N, Singh, A.K, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2020-03-18
Release date:2020-04-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structure of bovine lactoperoxidase with multiple iodide ions in the distaline heme cavity.
To Be Published
5OR9
DownloadVisualize
BU of 5or9 by Molmil
Crystal Structure of BAZ2B bromodomain in complex with 1-methyl-cyclopentapyrazole compound 13
Descriptor: (2~{S})-1-(4-fluorophenyl)sulfonyl-~{N}-(2-methyl-5,6-dihydro-4~{H}-cyclopenta[c]pyrazol-3-yl)pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B
Authors:Lolli, G, Vedove, A.D, Marchand, J.-R, Caflisch, A.
Deposit date:2017-08-15
Release date:2017-09-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Inhibitors of Four Bromodomains by Fragment-Anchored Ligand Docking.
J Chem Inf Model, 57, 2017
6LKM
DownloadVisualize
BU of 6lkm by Molmil
Crystal structure of Ribonucleotide reductase R1 subunit, RRM1 in complex with 5-chloro-N-((1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)propyl)-4-methyl-3,4-dihydro-2H-benzo[b][1,4]oxazine-8-sulfonamide
Descriptor: 5-chloro-N-((1S,2R)-2-(6-fluoro-2,3-dimethylphenyl)-1-(5-oxo-4,5-dihydro-1,3,4-oxadiazol-2-yl)propyl)-4-methyl-3,4-dihydro-2H-benzo[b][1,4]oxazine-8-sulfonamide, MAGNESIUM ION, Ribonucleoside-diphosphate reductase large subunit, ...
Authors:Miyahara, S, Chong, K.T, Suzuki, T.
Deposit date:2019-12-19
Release date:2020-12-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:TAS1553, a novel small molecule ribonucleotide reductase (RNR) subunit interaction inhibitor, displays remarkable anti-tumor activity
To be published
5THP
DownloadVisualize
BU of 5thp by Molmil
Rhodocetin in complex with the integrin alpha2-A domain
Descriptor: CHLORIDE ION, GLYCEROL, Integrin alpha-2, ...
Authors:McDougall, M, Orriss, G.L, Stetefeld, J.
Deposit date:2016-09-30
Release date:2017-08-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.006 Å)
Cite:Dramatic and concerted conformational changes enable rhodocetin to block alpha 2 beta 1 integrin selectively.
PLoS Biol., 15, 2017
4Q3E
DownloadVisualize
BU of 4q3e by Molmil
PylD cocrystallized with L-Ornithine-Nd-D-lysine and NAD+
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Quitterer, F, Beck, P, Bacher, A, Groll, M.
Deposit date:2014-04-11
Release date:2014-04-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Formation of Pyrroline and Tetrahydropyridine Rings in Amino Acids Catalyzed by Pyrrolysine Synthase (PylD).
Angew.Chem.Int.Ed.Engl., 53, 2014
2ZWU
DownloadVisualize
BU of 2zwu by Molmil
Crystal Structure of Camphor Soaked Ferric Cytochrome P450cam
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
Authors:Sakurai, K, Shimada, H, Hayashi, T, Tsukihara, T.
Deposit date:2008-12-18
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Substrate binding induces structural changes in cytochrome P450cam
Acta Crystallogr.,Sect.F, 65, 2009
4Y6V
DownloadVisualize
BU of 4y6v by Molmil
Yeast 20S proteasome in complex with Ac-PAE-ep
Descriptor: Ac-PAE-ep, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2015-02-13
Release date:2015-06-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Systematic Analyses of Substrate Preferences of 20S Proteasomes Using Peptidic Epoxyketone Inhibitors.
J.Am.Chem.Soc., 137, 2015
4Q3D
DownloadVisualize
BU of 4q3d by Molmil
PylD cocrystallized with L-Ornithine-Nd-D-ornithine and NAD+
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Quitterer, F, Beck, P, Bacher, A, Groll, M.
Deposit date:2014-04-11
Release date:2014-04-23
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Formation of Pyrroline and Tetrahydropyridine Rings in Amino Acids Catalyzed by Pyrrolysine Synthase (PylD).
Angew.Chem.Int.Ed.Engl., 53, 2014
4H8A
DownloadVisualize
BU of 4h8a by Molmil
Crystal structure of ureidoglycolate dehydrogenase in binary complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Ureidoglycolate dehydrogenase
Authors:Rhee, S, Shin, I, Kim, M.
Deposit date:2012-09-22
Release date:2013-01-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structural and functional insights into (s)-ureidoglycolate dehydrogenase, a metabolic branch point enzyme in nitrogen utilization.
Plos One, 7, 2012
7K6A
DownloadVisualize
BU of 7k6a by Molmil
Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001575
Descriptor: 1,2-ETHANEDIOL, 6-ethyl-5-[3-({3-[4-(trifluoromethyl)piperidin-1-yl]pyridin-2-yl}oxy)propoxy]pyrimidine-2,4-diamine, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-09-19
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor SDDC-0001575
to be published
3NTZ
DownloadVisualize
BU of 3ntz by Molmil
Design, Synthesis, Biological Evaluation and X-ray Crystal Structures of Novel Classical 6,5,6-tricyclicbenzo[4,5]thieno[2,3-d]pyrimidines as Dual Thymidylate Synthase and Dihydrofolate Reductase Inhibitors
Descriptor: Dihydrofolate reductase, N-[(4-{[(2-amino-4-oxo-3,4-dihydro[1]benzothieno[2,3-d]pyrimidin-5-yl)methyl]amino}phenyl)carbonyl]-L-glutamic acid, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Cody, V.
Deposit date:2010-07-06
Release date:2011-05-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Design, synthesis, biological evaluation and X-ray crystal structure of novel classical 6,5,6-tricyclic benzo[4,5]thieno[2,3-d]pyrimidines as dual thymidylate synthase and dihydrofolate reductase inhibitors.
Bioorg.Med.Chem., 19, 2011
3ZU5
DownloadVisualize
BU of 3zu5 by Molmil
Structure of the enoyl-ACP reductase FabV from Yersinia pestis with the cofactor NADH and the 2-pyridone inhibitor PT173
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 1-(3-amino-2-methylbenzyl)-4-hexylpyridin-2(1H)-one, PUTATIVE REDUCTASE YPO4104/Y4119/YP_4011, ...
Authors:Hirschbeck, M.W, Kuper, J, Tonge, P.J, Kisker, C.
Deposit date:2011-07-13
Release date:2012-01-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Yersinia Pestis Fabv Enoyl-Acp Reductase and its Interaction with Two 2-Pyridone Inhibitors
Structure, 20, 2012
3EC9
DownloadVisualize
BU of 3ec9 by Molmil
CRYSTAL STRUCTURE OF A NTF2-like protein (BTH_I0051) FROM BURKHOLDERIA THAILANDENSIS E264 AT 1.60 A RESOLUTION
Descriptor: ACETATE ION, GLYCEROL, uncharacterized NTF2-like protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-08-29
Release date:2008-09-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of NTF2-like protein of unknown function (YP_440611.1) from Burkholderia thailandensis E264 at 1.60 A resolution
To be published
4FA1
DownloadVisualize
BU of 4fa1 by Molmil
Crystal Structure of WT MauG in Complex with Pre-Methylamine Dehydrogenase Aged 130 Days.
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, ...
Authors:Yukl, E.T, Wilmot, C.M.
Deposit date:2012-05-21
Release date:2013-03-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
1SE9
DownloadVisualize
BU of 1se9 by Molmil
Structure of At3g01050, a ubiquitin-fold protein from Arabidopsis thaliana
Descriptor: ubiquitin family
Authors:Volkman, B.F, Lytle, B.L, Peterson, F.C, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2004-02-16
Release date:2004-02-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Cell-free protein production and labeling protocol for NMR-based structural proteomics.
Nat.Methods, 1, 2004
4DTI
DownloadVisualize
BU of 4dti by Molmil
Mycobacterium tuberculosis InhA-S94A mutant in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Pojer, F, Hartkoorn, R.C, Boy, S, Cole, S.T.
Deposit date:2012-02-21
Release date:2012-10-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Towards a new tuberculosis drug: pyridomycin - nature's isoniazid.
EMBO Mol Med, 4, 2012
3IR4
DownloadVisualize
BU of 3ir4 by Molmil
1.2 Angstrom Crystal Structure of the Glutaredoxin 2 (grxB) from Salmonella typhimurium in complex with Glutathione
Descriptor: CHLORIDE ION, GLUTATHIONE, Glutaredoxin 2, ...
Authors:Minasov, G, Wawrzak, Z, Skarina, T, Onopriyenko, O, Peterson, S.N, Halavaty, A, Dauter, Z, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-08-21
Release date:2009-09-01
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:1.2 Angstrom Crystal Structure of the Glutaredoxin 2 (grxB) from Salmonella typhimurium in complex with Glutathione.
TO BE PUBLISHED
2ZWT
DownloadVisualize
BU of 2zwt by Molmil
Crystal Structure of Ferric Cytochrome P450cam
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, Camphor 5-monooxygenase, ...
Authors:Sakurai, K, Shimada, H, Hayashi, T, Tsukihara, T.
Deposit date:2008-12-18
Release date:2009-02-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Substrate binding induces structural changes in cytochrome P450cam
Acta Crystallogr.,Sect.F, 65, 2009
1M72
DownloadVisualize
BU of 1m72 by Molmil
Crystal Structure of Caspase-1 from Spodoptera frugiperda
Descriptor: 1,2-ETHANEDIOL, Ace-Asp-Glu-Val-Asp-chloromethylketone, Caspase-1
Authors:Forsyth, C.M, Lemongello, D, Friesen, P.D, Fisher, A.J.
Deposit date:2002-07-18
Release date:2004-01-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an invertebrate caspase.
J.Biol.Chem., 279, 2004
5EQG
DownloadVisualize
BU of 5eqg by Molmil
Human GLUT1 in complex with inhibitor (2~{S})-3-(4-fluorophenyl)-2-[2-(3-hydroxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide
Descriptor: (2~{S})-3-(4-fluorophenyl)-2-[2-(3-hydroxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide, Solute carrier family 2, facilitated glucose transporter member 1
Authors:Kapoor, K, Finer-Moore, J, Pedersen, B.P, Caboni, L, Waight, A.B, Hillig, R, Bringmann, P, Heisler, I, Muller, T, Siebeneicher, H, Stroud, R.M.
Deposit date:2015-11-12
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism of inhibition of human glucose transporter GLUT1 is conserved between cytochalasin B and phenylalanine amides.
Proc.Natl.Acad.Sci.USA, 113, 2016
4QOM
DownloadVisualize
BU of 4qom by Molmil
Bacillus pumilus catalase with pyrogallol bound
Descriptor: BENZENE-1,2,3-TRIOL, CHLORIDE ION, Catalase, ...
Authors:Loewen, P.C.
Deposit date:2014-06-20
Release date:2015-02-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Unprecedented access of phenolic substrates to the heme active site of a catalase: Substrate binding and peroxidase-like reactivity of Bacillus pumilus catalase monitored by X-ray crystallography and EPR spectroscopy.
Proteins, 83, 2015
4FA4
DownloadVisualize
BU of 4fa4 by Molmil
Crystal Structure of WT MauG in Complex with Pre-Methylamine Dehydrogenase Aged 10 Days
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
Authors:Yukl, E.T, Wilmot, C.M.
Deposit date:2012-05-21
Release date:2013-03-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Diradical intermediate within the context of tryptophan tryptophylquinone biosynthesis.
Proc.Natl.Acad.Sci.USA, 110, 2013
5UJT
DownloadVisualize
BU of 5ujt by Molmil
Crystal structure of human HLA-DQ8 in complex with insulin mimotope binding in register 3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose, MHC class II HLA-DQ-beta-1, ...
Authors:Wang, Y, Dai, S.
Deposit date:2017-01-18
Release date:2017-12-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:C-terminal modification of the insulin B:11-23 peptide creates superagonists in mouse and human type 1 diabetes.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7EB9
DownloadVisualize
BU of 7eb9 by Molmil
The structure of the A20-binding inhibitor of NF-kB 1 in complex with tetra-ubiquitin
Descriptor: TNFAIP3-interacting protein 1, tetra ubiquitin
Authors:Lo, Y.C, Lin, S.C.
Deposit date:2021-03-09
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and Biochemical Basis for Higher-Order Assembly between A20-Binding Inhibitor of NF-kappa B 1 (ABIN1) and M1-Linked Ubiquitins.
J.Mol.Biol., 433, 2021

243083

數據於2025-10-15公開中

PDB statisticsPDBj update infoContact PDBjnumon