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6KVH
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BU of 6kvh by Molmil
The mutant crystal structure of endo-polygalacturonase (T284A) from Talaromyces leycettanus JCM 12802
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose, endo-polygalacturonase
Authors:Tu, T, Wang, Z, Luo, H, Yao, B.
Deposit date:2019-09-04
Release date:2020-09-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Insights into the Mechanisms Underlying the Kinetic Stability of GH28 Endo-Polygalacturonase.
J.Agric.Food Chem., 69, 2021
4YY2
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BU of 4yy2 by Molmil
Computationally designed left-handed alpha/alpha toroid with 3 repeats in space group P212121
Descriptor: SODIUM ION, dTor_3x33L
Authors:Hallinan, J.P, Bradley, P, Stoddard, B.L.
Deposit date:2015-03-23
Release date:2015-12-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.854 Å)
Cite:Rational design of alpha-helical tandem repeat proteins with closed architectures.
Nature, 528, 2015
4K9C
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BU of 4k9c by Molmil
CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N-(HYDROXYMETHYL)BENZAMIDE and 4-METHYL-3,4-DIHYDRO-2H-1,4-BENZOXAZINE-7-CARBOXYLIC ACID
Descriptor: 4-methyl-3,4-dihydro-2H-1,4-benzoxazine-7-carboxylic acid, ADENOSINE, DIMETHYL SULFOXIDE, ...
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-19
Release date:2013-05-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:CRYSTAL STRUCTURE OF probable sugar kinase protein from Rhizobium etli CFN 42 complexed with N-(HYDROXYMETHYL)BENZAMIDE and 4-METHYL-3,4-DIHYDRO-2H-1,4-BENZOXAZINE-7-CARBOXYLIC ACID
To be Published
6OCJ
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BU of 6ocj by Molmil
Crystal Structure of Equine Serum Albumin in Complex with Suprofen
Descriptor: (2S)-2-[4-(thiophene-2-carbonyl)phenyl]propanoic acid, ACETATE ION, MALONATE ION, ...
Authors:Sekula, B, Zielinski, K, Bujacz, A, Bujacz, G.
Deposit date:2019-03-24
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural investigations of stereoselective profen binding by equine and leporine serum albumins.
Chirality, 32, 2020
6X67
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BU of 6x67 by Molmil
Cryo-EM structure of piggyBac transposase strand transfer complex (STC)
Descriptor: CALCIUM ION, DNA (37-MER), DNA (47-MER), ...
Authors:Chen, Q, Hickman, A.B, Dyda, F.
Deposit date:2020-05-27
Release date:2020-07-22
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Structural basis of seamless excision and specific targeting by piggyBac transposase
Nat Commun, 11, 2020
6X6L
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BU of 6x6l by Molmil
Cryo-EM Structure of CagX and CagY within the dCag3 Helicobacter pylori PR
Descriptor: Cag pathogenicity island protein (Cag7), Cag pathogenicity island protein (Cag8)
Authors:Sheedlo, M.J, Chung, J.M, Sawhney, N, Durie, C.L, Cover, T.L, Ohi, M.D, Lacy, D.B.
Deposit date:2020-05-28
Release date:2020-09-30
Last modified:2021-04-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM reveals species-specific components within the Helicobacter pylori Cag type IV secretion system core complex.
Elife, 9, 2020
6X74
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BU of 6x74 by Molmil
Rev1 Mg2+-facilitated Product Complex with no monophosphates
Descriptor: CHLORIDE ION, DNA (5'-D(*GP*GP*GP*GP*TP*GP*TP*GP*GP*TP*AP*GP*C*)-3'), DNA (5'-D(P*AP*TP*CP*GP*CP*TP*AP*CP*CP*AP*CP*AP*CP*CP*CP*C)-3'), ...
Authors:Weaver, T.M, Freudenthal, B.D.
Deposit date:2020-05-29
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Visualizing Rev1 catalyze protein-template DNA synthesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
6X7L
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BU of 6x7l by Molmil
LnmK in complex with 2-nitronate-propionyl-CoA
Descriptor: ALANINE, Bifunctional methylmalonyl-CoA:ACP acyltransferase/decarboxylase, SULFATE ION, ...
Authors:Stunkard, L.M, Kick, B.J, Lohman, J.R.
Deposit date:2020-05-30
Release date:2020-06-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structures of LnmK, a Bifunctional Acyltransferase/Decarboxylase, with Substrate Analogues Reveal the Basis for Selectivity and Stereospecificity.
Biochemistry, 60, 2021
5ZQN
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BU of 5zqn by Molmil
Crystal structure of Mycobacterium tuberculosis HisB in complex with a ligand
Descriptor: (2R,3S)-2,3-dihydroxy-3-(1H-imidazol-5-yl)propyl dihydrogen phosphate, CHLORIDE ION, Imidazoleglycerol-phosphate dehydratase, ...
Authors:Kumar, D, Pal, R.K, Biswal, B.K.
Deposit date:2018-04-19
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Characterization of a triazole scaffold compound as an inhibitor of Mycobacterium tuberculosis imidazoleglycerol-phosphate dehydratase.
Proteins, 2021
2LRT
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BU of 2lrt by Molmil
Solution structure of the uncharacterized thioredoxin-like protein BVU_1432 from Bacteroides vulgatus
Descriptor: Uncharacterized protein
Authors:Harris, R, Bandaranayake, A.D, Banu, R, Bonanno, J.B, Calarese, D.A, Celikgil, A, Chamala, S, Chan, M.K, Chaparro, R, Evans, B, Garforth, S, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Lim, S, Love, J, Matikainen, B, Patel, H, Seidel, R.D, Smith, B, Stead, M, Girvin, M.E, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-04-13
Release date:2012-04-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the uncharacterized thioredoxin-like protein BVU_1432 from Bacteroides vulgatus
To be Published
4Z0V
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BU of 4z0v by Molmil
The structure of human PDE12 residues 161-609
Descriptor: 2',5'-phosphodiesterase 12, GLYCEROL, MAGNESIUM ION
Authors:Nolte, R.T, Wisely, B, Wang, L, Wood, E.R.
Deposit date:2015-03-26
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The Role of Phosphodiesterase 12 (PDE12) as a Negative Regulator of the Innate Immune Response and the Discovery of Antiviral Inhibitors.
J.Biol.Chem., 290, 2015
6OH9
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BU of 6oh9 by Molmil
Yeast Guanine Deaminase
Descriptor: NONAETHYLENE GLYCOL, SULFATE ION, Yeast Guanine Deaminase, ...
Authors:Shek, R.S, French, J.B.
Deposit date:2019-04-05
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Determinants for Substrate Selectivity in Guanine Deaminase Enzymes of the Amidohydrolase Superfamily.
Biochemistry, 58, 2019
4OVM
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BU of 4ovm by Molmil
Crystal structure of SgcJ protein from Streptomyces carzinostaticus
Descriptor: uncharacterized protein SgcJ
Authors:Chang, C, Bigelow, L, Clancy, S, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2013-11-20
Release date:2013-12-25
Last modified:2023-03-22
Method:X-RAY DIFFRACTION (2.719 Å)
Cite:Crystal structure of SgcJ, an NTF2-like superfamily protein involved in biosynthesis of the nine-membered enediyne antitumor antibiotic C-1027.
J.Antibiot., 2016
6HFZ
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BU of 6hfz by Molmil
Crystal structure of a two-domain esterase (CEX) active on acetylated mannans
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, GDSL-like protein
Authors:Michalak, L, La Rosa, S.L, Rohr, A.K, Aachmann, F.L, Westereng, B.
Deposit date:2018-08-22
Release date:2019-09-11
Last modified:2020-04-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:A pair of esterases from a commensal gut bacterium remove acetylations from all positions on complex beta-mannans.
Proc.Natl.Acad.Sci.USA, 117, 2020
5HAU
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BU of 5hau by Molmil
Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Gagnon, M.G, Roy, R.N, Lomakin, I.B, Florin, T, Mankin, A.S, Steitz, T.A.
Deposit date:2015-12-30
Release date:2016-04-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of proline-rich peptides bound to the ribosome reveal a common mechanism of protein synthesis inhibition.
Nucleic Acids Res., 44, 2016
6DFW
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BU of 6dfw by Molmil
TCR 8F10 in complex with IAg7-p8G9E
Descriptor: 8F10 alpha chain, 8F10 beta chain, H-2 class II histocompatibility antigen, ...
Authors:Wang, Y, Dai, S.
Deposit date:2018-05-15
Release date:2019-04-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:How C-terminal additions to insulin B-chain fragments create superagonists for T cells in mouse and human type 1 diabetes.
Sci Immunol, 4, 2019
4Z9A
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BU of 4z9a by Molmil
Crystal structure of Low Molecular Weight Protein Tyrosine Phosphatase isoform A complexed with phenylmethanesulfonic acid
Descriptor: GLYCEROL, Low molecular weight phosphotyrosine protein phosphatase, SULFATE ION, ...
Authors:Trivella, D.B.B, Fonseca, E.M.B, Scorsato, V, Dias, M.P, Aparicio, R.
Deposit date:2015-04-10
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the apo form and a complex of human LMW-PTP with a phosphonic acid provide new evidence of a secondary site potentially related to the anchorage of natural substrates.
Bioorg.Med.Chem., 23, 2015
4Z9B
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BU of 4z9b by Molmil
Crystal structure of Low Molecular Weight Protein Tyrosine Phosphatase isoform A complexed with benzylphosphonic acid
Descriptor: Low molecular weight phosphotyrosine protein phosphatase, benzylphosphonic acid
Authors:Fonseca, E.M.B, Trivella, D.B.B, Scorsato, V, Dias, M.P, de Oliveira, F.L, Miranda, P.C.M.L, Aparicio, R.
Deposit date:2015-04-10
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structures of the apo form and a complex of human LMW-PTP with a phosphonic acid provide new evidence of a secondary site potentially related to the anchorage of natural substrates.
Bioorg.Med.Chem., 23, 2015
1WV6
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BU of 1wv6 by Molmil
X-ray structure of the A-decamer GCGTATACGC with a single 2'-O-butyl thymine in place of T6, Sr-form
Descriptor: 5'-D(*GP*CP*GP*TP*AP*(2BT)P*AP*CP*GP*C)-3', STRONTIUM ION
Authors:Egli, M, Minasov, G, Tereshko, V, Pallan, P.S, Teplova, M, Inamati, G.B, Lesnik, E.A, Owens, S.R, Ross, B.S, Prakash, T.P, Manoharam, M.
Deposit date:2004-12-11
Release date:2005-06-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Probing the influence of stereoelectronic effects on the biophysical properties of oligonucleotides: comprehensive analysis of the RNA affinity, nuclease resistance, and crystal structure of ten 2'-O-ribonucleic acid modifications.
Biochemistry, 44, 2005
4ZA0
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BU of 4za0 by Molmil
Structure of Human Enolase 2 in complex with Phosphonoacetohydroxamate
Descriptor: Gamma-enolase, MAGNESIUM ION, PHOSPHONOACETOHYDROXAMIC ACID
Authors:Leonard, P.G, Maxwell, D, Czako, B, Muller, F.L.
Deposit date:2015-04-13
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:SF2312 is a natural phosphonate inhibitor of enolase.
Nat.Chem.Biol., 12, 2016
9GDK
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BU of 9gdk by Molmil
Jumonji domain-containing protein 1C with crystallization epitope mutations L2440Y:G2444H
Descriptor: Probable JmjC domain-containing histone demethylation protein 2C
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-08-05
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To Be Published
7SJJ
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BU of 7sjj by Molmil
Crystal structure of photoactive yellow protein (PYP); F96oCNF construct
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Weaver, J.B, Kirsh, J.M, Boxer, S.G.
Deposit date:2021-10-17
Release date:2022-05-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Nitrile Infrared Intensities Characterize Electric Fields and Hydrogen Bonding in Protic, Aprotic, and Protein Environments.
J.Am.Chem.Soc., 144, 2022
6HKG
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BU of 6hkg by Molmil
Structure of FISW84 Fab Fragment
Descriptor: FISW84 Fab Fragment Heavy Chain, FISW84 Fab Fragment Light Chain, SULFATE ION
Authors:Benton, D.J, Rosenthal, P.B.
Deposit date:2018-09-06
Release date:2018-09-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Influenza hemagglutinin membrane anchor.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4OMR
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BU of 4omr by Molmil
Crystal structure of Tfu_1878, a putative enoyl-CoA hydratase from Thermobifida fusca YX in complex with acetoacetyl-CoA
Descriptor: ACETOACETYL-COENZYME A, BENZAMIDINE, Enoyl-CoA hydratase
Authors:Langner, K.M, Cooper, D.R, Chapman, H.C, Handing, K.B, Stead, M, Hillerich, B, Ahmed, M, Bonanno, J.B, Seidel, R, Almo, S.C, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-01-27
Release date:2014-04-02
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of Tfu_1878, a putative enoyl-CoA hydratase from Thermobifida fusca YX in complex with acetoacetyl-CoA
To be Published
4ONT
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BU of 4ont by Molmil
Ternary host recognition complex of complement factor H, C3d, and sialic acid
Descriptor: Complement C3d fragment, Complement factor H, GLYCEROL, ...
Authors:Blaum, B.S, Stehle, T.S.
Deposit date:2014-01-29
Release date:2014-11-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for sialic acid-mediated self-recognition by complement factor H.
Nat.Chem.Biol., 11, 2015

224004

數據於2024-08-21公開中

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