Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6NON
DownloadVisualize
BU of 6non by Molmil
Structure of Cyanthece apo McdA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cobyrinic acid ac-diamide synthase, MAGNESIUM ION
Authors:Schumacher, M.A.
Deposit date:2019-01-16
Release date:2019-04-24
Last modified:2019-06-26
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
6NOP
DownloadVisualize
BU of 6nop by Molmil
Structure of Cyanothece McdA(D38A)-ATP complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cobyrinic acid ac-diamide synthase, MAGNESIUM ION
Authors:Schumacher, M.A.
Deposit date:2019-01-16
Release date:2019-04-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of maintenance of carboxysome distribution Walker-box McdA and McdB adaptor homologs.
Nucleic Acids Res., 47, 2019
7U8F
DownloadVisualize
BU of 7u8f by Molmil
Ternary complex structure of Cereblon-DDB1 bound to IKZF2(ZF2) and the molecular glue DKY709
Descriptor: (3S)-3-[5-(1-benzylpiperidin-4-yl)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA damage-binding protein 1, ...
Authors:Ma, X, Ornelas, E, Clifton, M.C.
Deposit date:2022-03-08
Release date:2023-03-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Discovery and characterization of a selective IKZF2 glue degrader for cancer immunotherapy.
Cell Chem Biol, 30, 2023
8GA8
DownloadVisualize
BU of 8ga8 by Molmil
Structure of the yeast (HDAC) Rpd3L complex
Descriptor: Histone deacetylase RPD3, Transcriptional regulatory protein DEP1, Transcriptional regulatory protein PHO23, ...
Authors:Patel, A.B, Radhakrishnan, I, He, Y.
Deposit date:2023-02-22
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of the Saccharomyces cerevisiae Rpd3L histone deacetylase complex.
Nat Commun, 14, 2023
6FTS
DownloadVisualize
BU of 6fts by Molmil
TETR(D) N82A MUTANT IN COMPLEX WITH PEG4
Descriptor: CHLORIDE ION, TETRAETHYLENE GLYCOL, Tetracycline repressor protein class D
Authors:Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
Deposit date:2018-02-23
Release date:2019-02-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
6FPL
DownloadVisualize
BU of 6fpl by Molmil
TETR(D) E147A MUTANT IN COMPLEX WITH TETRACYCLINE AND MAGNESIUM
Descriptor: CHLORIDE ION, MAGNESIUM ION, TETRACYCLINE, ...
Authors:Hinrichs, W, Palm, G.J, Berndt, L, Girbardt, B.
Deposit date:2018-02-11
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
5CYV
DownloadVisualize
BU of 5cyv by Molmil
Crystal structure of CouR from Rhodococcus jostii RHA1 bound to p-coumaroyl-CoA
Descriptor: ACETATE ION, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Stogios, P.J, Xu, X, Dong, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-07-30
Release date:2015-08-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:The activity of CouR, a MarR family transcriptional regulator, is modulated through a novel molecular mechanism.
Nucleic Acids Res., 44, 2016
2OEN
DownloadVisualize
BU of 2oen by Molmil
Structural mechanism for the fine-tuning of CcpA function by the small molecule effectors glucose-6-phosphate and fructose-1,6-bisphosphate
Descriptor: Catabolite control protein, Phosphocarrier protein HPr
Authors:Schumacher, M.A, Seidel, G, Hillen, W, Brennan, R.G.
Deposit date:2006-12-30
Release date:2007-05-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Structural Mechanism for the Fine-tuning of CcpA Function by The Small Molecule Effectors Glucose 6-Phosphate and Fructose 1,6-Bisphosphate.
J.Mol.Biol., 368, 2007
6WPA
DownloadVisualize
BU of 6wpa by Molmil
Structure of AvaR1 bound to DNA half-site
Descriptor: AvaR1, PAL2-1-5'-GC
Authors:Kapoor, I, Olivares, P.J, Nair, S.K.
Deposit date:2020-04-26
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Biochemical basis for the regulation of biosynthesis of antiparasitics by bacterial hormones.
Elife, 9, 2020
4A0X
DownloadVisualize
BU of 4a0x by Molmil
Structure of the global transcription regulator FapR from Staphylococcus aureus
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, TRANSCRIPTION FACTOR FAPR, ...
Authors:Albanesi, D, Guerin, M.E, Buschiazzo, A, de Mendoza, D, Alzari, P.M.
Deposit date:2011-09-13
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Feed-Forward Transcriptional Regulation of Membrane Lipid Homeostasis in Staphylococcus Aureus.
Plos Pathog., 9, 2013
7EGP
DownloadVisualize
BU of 7egp by Molmil
The structure of SWI/SNF-nucleosome complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein ARP9, Actin-related protein 7, ...
Authors:Chen, Z.C, Chen, K.J, He, Z.Y, Ye, Y.P.
Deposit date:2021-03-24
Release date:2022-01-12
Method:ELECTRON MICROSCOPY (6.9 Å)
Cite:Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity.
Cell Discov, 7, 2021
4ZIA
DownloadVisualize
BU of 4zia by Molmil
Crystal Structure of STAT3 N-terminal domain
Descriptor: FORMIC ACID, MAGNESIUM ION, NICKEL (II) ION, ...
Authors:Hu, T, Chopra, R.
Deposit date:2015-04-28
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Impact of the N-Terminal Domain of STAT3 in STAT3-Dependent Transcriptional Activity.
Mol.Cell.Biol., 35, 2015
4A0Z
DownloadVisualize
BU of 4a0z by Molmil
Structure of the global transcription regulator FapR from Staphylococcus aureus in complex with malonyl-CoA
Descriptor: MALONYL-COENZYME A, TRANSCRIPTION FACTOR FAPR
Authors:Albanesi, D, Guerin, M.E, Buschiazzo, A, de Mendoza, D, Alzari, P.M.
Deposit date:2011-09-13
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Feed-Forward Transcriptional Regulation of Membrane Lipid Homeostasis in Staphylococcus Aureus.
Plos Pathog., 9, 2013
4A0Y
DownloadVisualize
BU of 4a0y by Molmil
Structure of the global transcription regulator FapR from Staphylococcus aureus
Descriptor: CHLORIDE ION, TRANSCRIPTION FACTOR FAPR
Authors:Albanesi, D, Guerin, M.E, Buschiazzo, A, de Mendoza, D, Alzari, P.M.
Deposit date:2011-09-13
Release date:2012-09-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Feed-Forward Transcriptional Regulation of Membrane Lipid Homeostasis in Staphylococcus Aureus.
Plos Pathog., 9, 2013
3KEO
DownloadVisualize
BU of 3keo by Molmil
Crystal Structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae complexed with NAD+
Descriptor: CHLORIDE ION, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Thiyagarajan, S, Logan, D, von Wachenfeldt, C.
Deposit date:2009-10-26
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:NAD+ pool depletion as a signal for the Rex regulon involved in Streptococcus agalactiae virulence.
Plos Pathog., 17, 2021
5HYZ
DownloadVisualize
BU of 5hyz by Molmil
Crystal Structure of SCL7 in Oryza sativa
Descriptor: GRAS family transcription factor containing protein, expressed
Authors:Wu, Y, Li, S, Zhao, Y, Sun, L.
Deposit date:2016-02-02
Release date:2016-04-27
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Crystal Structure of the GRAS Domain of SCARECROW-LIKE7 in Oryza sativa.
Plant Cell, 28, 2016
3HHG
DownloadVisualize
BU of 3hhg by Molmil
Structure of CrgA, a LysR-type transcriptional regulator from Neisseria meningitidis.
Descriptor: Transcriptional regulator, LysR family
Authors:Sainsbury, S, Ren, J, Owens, R.J, Stuart, D.I, Oxford Protein Production Facility (OPPF)
Deposit date:2009-05-15
Release date:2009-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The structure of CrgA from Neisseria meningitidis reveals a new octameric assembly state for LysR transcriptional regulators
Nucleic Acids Res., 37, 2009
3KEQ
DownloadVisualize
BU of 3keq by Molmil
Crystal structure of a Rex-family transcriptional regulatory protein from Streptococcus agalactiae complexed with NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Redox-sensing transcriptional repressor rex
Authors:Thiyagarajan, S, Logan, D, von Wachenfeldt, C.
Deposit date:2009-10-26
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:NAD+ pool depletion as a signal for the Rex regulon involved in Streptococcus agalactiae virulence.
Plos Pathog., 17, 2021
4RNP
DownloadVisualize
BU of 4rnp by Molmil
BACTERIOPHAGE T7 RNA POLYMERASE, HIGH SALT CRYSTAL FORM, LOW TEMPERATURE DATA, ALPHA-CARBONS ONLY
Descriptor: RNA POLYMERASE
Authors:Liu, Z.J, Sousa, R, Rose, J.P, Wang, B.C.
Deposit date:1997-09-11
Release date:1997-12-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of bacteriophage T7 RNA polymerase at 3.3 A resolution.
Nature, 364, 1993
6A2T
DownloadVisualize
BU of 6a2t by Molmil
Mycobacterium tuberculosis LexA C-domain K197A
Descriptor: ACRYLIC ACID, LexA repressor
Authors:Chandran, A.V, Srikalaivani, R, Paul, A, Vijayan, M.
Deposit date:2018-06-12
Release date:2019-01-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical characterization of Mycobacterium tuberculosis LexA and structural studies of its C-terminal segment.
Acta Crystallogr D Struct Biol, 75, 2019
6SDG
DownloadVisualize
BU of 6sdg by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
Descriptor: 21-7_A, 21-7_B, Auxin response factor
Authors:Crespo, I, Weijers, D, Boer, D.R.
Deposit date:2019-07-27
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Design principles of a minimal auxin response system.
Nat.Plants, 6, 2020
2ZOZ
DownloadVisualize
BU of 2zoz by Molmil
Crystal structure of the ethidium-bound form of the multi-drug binding transcriptional repressor CgmR
Descriptor: ETHIDIUM, GLYCEROL, SULFATE ION, ...
Authors:Itou, H, Shirakihara, Y, Tanaka, I.
Deposit date:2008-06-20
Release date:2008-07-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of the Multidrug Binding Repressor Corynebacteriumglutamicum CgmR in Complex with Inducers and with an Operator
J.Mol.Biol., 403, 2010
7KTR
DownloadVisualize
BU of 7ktr by Molmil
Cryo-EM structure of the human SAGA coactivator complex (TRRAP, core)
Descriptor: Ataxin-7, INOSITOL HEXAKISPHOSPHATE, Isoform 3 of Transcription factor SPT20 homolog, ...
Authors:Herbst, D.A, Esbin, M.N, Nogales, E.
Deposit date:2020-11-24
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structure of the human SAGA coactivator complex.
Nat.Struct.Mol.Biol., 28, 2021
7KTS
DownloadVisualize
BU of 7kts by Molmil
Negative stain EM structure of the human SAGA coactivator complex (TRRAP, core, splicing module)
Descriptor: Ataxin-7, Isoform 3 of Transcription factor SPT20 homolog, STAGA complex 65 subunit gamma, ...
Authors:Herbst, D.A, Esbin, M.N, Nogales, E.
Deposit date:2020-11-24
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (19.09 Å)
Cite:Structure of the human SAGA coactivator complex.
Nat.Struct.Mol.Biol., 28, 2021
7SVW
DownloadVisualize
BU of 7svw by Molmil
Strand-transfer complex of TnsB from ShCAST
Descriptor: MAGNESIUM ION, STC_LE_For, STC_LE_Rev1, ...
Authors:Park, J, Tsai, A.W.T, Kellogg, E.H.
Deposit date:2021-11-19
Release date:2022-08-10
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.69 Å)
Cite:Mechanistic details of CRISPR-associated transposon recruitment and integration revealed by cryo-EM.
Proc.Natl.Acad.Sci.USA, 119, 2022

224572

數據於2024-09-04公開中

PDB statisticsPDBj update infoContact PDBjnumon