PDB: 45953 resultsInfo pagesStatus searchChemie searchBIRD

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2RN5	Humal Insulin Mutant B31Lys-B32Arg Descriptor: Insulin Authors: Bocian, W, Kozerski, L. Deposit date: 2007-12-06 Release date: 2008-10-28 Last modified: 2022-03-16 Method: SOLUTION NMR Cite: NMR structure of biosynthetic engineered human insulin monomer B31(Lys)-B32(Arg) in water/acetonitrile solution. Comparison with the solution structure of native human insulin monomer Biopolymers, 89, 2008
6K59	Structure of Glargine insulin in 20% acetic acid-d4 (pH 1.9) Descriptor: Glargine Insulin Chain-A, Glargine insulin Chain-B Authors: Ratha, B.N, Kar, R.K, Bhunia, A. Deposit date: 2019-05-28 Release date: 2020-05-06 Method: SOLUTION NMR Cite: Molecular Details of a Salt Bridge and Its Role in Insulin Fibrillation by NMR and Raman Spectroscopic Analysis. J.Phys.Chem.B, 124, 2020
5CVW	CRYSTAL STRUCTURE OF RTX DOMAIN BLOCK V OF ADENYLATE CYCLASE TOXIN FROM BORDETELLA PERTUSSIS Descriptor: 1,2-ETHANEDIOL, Bifunctional hemolysin/adenylate cyclase, CALCIUM ION, ... Authors: Motlova, L, Barinka, C, Bumba, L. Deposit date: 2015-07-27 Release date: 2015-09-09 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Calcium-Driven Folding of RTX Domain beta-Rolls Ratchets Translocation of RTX Proteins through Type I Secretion Ducts. Mol.Cell, 62, 2016
5CXL	CRYSTAL STRUCTURE OF RTX DOMAIN BLOCK V OF ADENYLATE CYCLASE TOXIN FROM BORDETELLA PERTUSSIS Descriptor: Bifunctional hemolysin/adenylate cyclase, CALCIUM ION, NITRATE ION Authors: Motlova, L, Barinka, C, Bumba, L. Deposit date: 2015-07-29 Release date: 2015-09-02 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Calcium-Driven Folding of RTX Domain beta-Rolls Ratchets Translocation of RTX Proteins through Type I Secretion Ducts. Mol.Cell, 62, 2016
2R0H	Fungal lectin CGL3 in complex with chitotriose (chitotetraose) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CGL3 lectin Authors: Waelti, M.A, Walser, P.J, Thore, S, Gruenler, A, Ban, N, Kuenzler, M, Aebi, M. Deposit date: 2007-08-20 Release date: 2008-05-20 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural Basis for Chitotetraose Coordination by CGL3, a Novel Galectin-Related Protein from Coprinopsis cinerea J.Mol.Biol., 379, 2008
2A3L	X-Ray Structure of Adenosine 5'-Monophosphate Deaminase from Arabidopsis Thaliana in Complex with Coformycin 5'-Phosphate Descriptor: AMP deaminase, COFORMYCIN 5'-PHOSPHATE, PHOSPHATE ION, ... Authors: Han, B.W, Wesenberg, G.E, Phillips Jr, G.N, Bitto, E, Bingman, C.A, Allard, S.T.M, Center for Eukaryotic Structural Genomics (CESG) Deposit date: 2005-06-25 Release date: 2005-07-19 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.34 Å) Cite: Membrane association, mechanism of action, and structure of Arabidopsis embryonic factor 1 (FAC1). J.Biol.Chem., 281, 2006
5DNA	Crystal structure of Candida boidinii formate dehydrogenase Descriptor: FORMATE DEHYDROGENASE, SULFATE ION Authors: Guo, Q, Gakhar, L, Wichersham, K, Francis, K, Vardi-Kilshtain, A, Major, D.T, Cheatum, C.M, Kohen, A. Deposit date: 2015-09-09 Release date: 2016-05-04 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Structural and Kinetic Studies of Formate Dehydrogenase from Candida boidinii. Biochemistry, 55, 2016
6DNA	Crystal structure of T110A mutant human Glutamate oxaloacetate transaminase 1 (GOT1) Descriptor: Aspartate aminotransferase, cytoplasmic, PYRIDOXAL-5'-PHOSPHATE, ... Authors: Assar, Z, Holt, M.C, Stein, A.J, Lairson, L, Lyssiotis, C.A. Deposit date: 2018-06-06 Release date: 2018-11-14 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (3 Å) Cite: Biochemical Characterization and Structure-Based Mutational Analysis Provide Insight into the Binding and Mechanism of Action of Novel Aspartate Aminotransferase Inhibitors. Biochemistry, 57, 2018
7DNA	Photocleavable Fluorescent Protein in green and red form Descriptor: Green-to-red photoconvertible GFP-like protein, PHENYLALANINE AMIDE Authors: Wen, Y, Lemieux, J.M. Deposit date: 2020-12-09 Release date: 2021-01-27 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Photocleavable proteins that undergo fast and efficient dissociation. Chem Sci, 12, 2021
1DNA	D221(169)N MUTANT DOES NOT PROMOTE OPENING OF THE COFACTOR IMIDAZOLIDINE RING Descriptor: 10-PROPARGYL-5,8-DIDEAZAFOLIC ACID, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, THYMIDYLATE SYNTHASE Authors: Sage, C.R, Michelitsch, M.D, Finer-Moore, J, Stroud, R.M. Deposit date: 1998-06-25 Release date: 1998-11-04 Last modified: 2021-11-03 Method: X-RAY DIFFRACTION (2.2 Å) Cite: D221 in thymidylate synthase controls conformation change, and thereby opening of the imidazolidine. Biochemistry, 37, 1998
3DNA	Iodobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant (seleno version) Descriptor: 2-HYDROXYETHYL DISULFIDE, BETA-MERCAPTOETHANOL, CHLORIDE ION, ... Authors: Liu, L, Matthews, B.W. Deposit date: 2008-07-01 Release date: 2008-11-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding. J.Mol.Biol., 385, 2009
4DNA	CRYSTAL STRUCTURE OF putative glutathione reductase from Sinorhizobium meliloti 1021 Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Probable glutathione reductase Authors: Malashkevich, V.N, Bhosle, R, Toro, R, Seidel, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) Deposit date: 2012-02-08 Release date: 2012-03-21 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.8 Å) Cite: CRYSTAL STRUCTURE OF putative glutathione reductase from Sinorhizobium meliloti 1021 To be Published
8DNA	Acidipropionibacterium acidipropionici encapsulin in a closed state at pH 3.0 Descriptor: 29 kDa antigen cfp29 Authors: Jones, J.A, Andreas, M.P, Giessen, T.W. Deposit date: 2022-07-11 Release date: 2023-03-22 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (2.77 Å) Cite: Exploring the Extreme Acid Tolerance of a Dynamic Protein Nanocage. Biomacromolecules, 24, 2023
2DKV	Crystal structure of class I chitinase from Oryza sativa L. japonica Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, chitinase Authors: Kezuka, Y, Nishizawa, Y, Watanabe, T, Nonaka, T. Deposit date: 2006-04-14 Release date: 2007-05-01 Last modified: 2020-01-01 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure of full-length class I chitinase from rice revealed by X-ray crystallography and small-angle X-ray scattering. Proteins, 78, 2010
7MEI	Composite structure of EC+EC Descriptor: DNA (74-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Yang, C, Murakami, K. Deposit date: 2021-04-06 Release date: 2022-03-02 Method: ELECTRON MICROSCOPY (3.54 Å) Cite: Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
7MKA	Structure of EC+EC (leading EC-focused) Descriptor: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Yang, C, Murakami, K. Deposit date: 2021-04-22 Release date: 2022-04-27 Last modified: 2023-05-17 Method: ELECTRON MICROSCOPY (3.54 Å) Cite: Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
7MK9	Complex structure of trailing EC of EC+EC (trailing EC-focused) Descriptor: DNA (40-MER), DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Yang, C, Murakami, K. Deposit date: 2021-04-22 Release date: 2022-04-27 Last modified: 2023-05-17 Method: ELECTRON MICROSCOPY (3.54 Å) Cite: Structural visualization of de novo transcription initiation by Saccharomyces cerevisiae RNA polymerase II. Mol.Cell, 82, 2022
1WCM	Complete 12-Subunit RNA Polymerase II at 3.8 Angstrom Descriptor: DNA-DIRECTED RNA POLYMERASE II 13.6 KDA POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 14.2 KDA POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE, ... Authors: Armache, K.-J, Mitterweger, S, Meinhart, A, Cramer, P. Deposit date: 2004-11-17 Release date: 2004-12-14 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3.8 Å) Cite: Structures of Complete RNA Polymerase II and its Subcomplex,Rpb4/7 J.Biol.Chem., 280, 2005
7DN3	Structure of Human RNA Polymerase III elongation complex Descriptor: DNA (5'-D(P*TP*CP*GP*TP*CP*TP*GP*AP*TP*CP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*CP*CP*GP*AP*GP*AP*TP*CP*AP*GP*AP*CP*GP*AP*GP*AP*TP*CP*GP*GP*G)-3'), DNA-directed RNA polymerase III subunit RPC1, ... Authors: Li, L, Yu, Z, Zhao, D, Ren, Y, Hou, H, Xu, Y. Deposit date: 2020-12-08 Release date: 2021-03-17 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structure of human RNA polymerase III elongation complex. Cell Res., 31, 2021
6XAV	CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex bound with NusG Descriptor: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Hao, Z.T, Kim, H.K, Walz, T, Nudler, E. Deposit date: 2020-06-04 Release date: 2020-12-16 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (7.7 Å) Cite: Pre-termination Transcription Complex: Structure and Function. Mol.Cell, 81, 2021
8HKC	Cryo-EM structure of E. coli RNAP sigma32 complex Descriptor: DNA (54-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Wu, S, Ma, L.X. Deposit date: 2022-11-25 Release date: 2023-05-31 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (2.49 Å) Cite: Structural Insight into the Mechanism of sigma 32-Mediated Transcription Initiation of Bacterial RNA Polymerase. Biomolecules, 13, 2023
6XAS	CryoEM Structure of E. coli Rho-dependent Transcription Pre-termination Complex Descriptor: DNA (29-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... Authors: Hao, Z.T, Kim, H.K, Walz, T, Nudler, E. Deposit date: 2020-06-04 Release date: 2020-12-16 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Pre-termination Transcription Complex: Structure and Function. Mol.Cell, 81, 2021
8GZG	Cryo-EM structure of Synechocystis sp. PCC 6803 RPitc Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Shen, L.Q, You, L.L, Zhang, Y. Deposit date: 2022-09-27 Release date: 2023-04-19 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.13 Å) Cite: Cryo-EM structure of Synechocystis sp. PCC 6803 CTP-bound RPitc Proc.Natl.Acad.Sci.USA, 2023
6DRD	RNA Pol II(G) Descriptor: DNA-directed RNA polymerase II subunit GRINL1A, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11-a, ... Authors: Yu, X, Jishage, M, Shi, Y, Ganesan, S, Sali, A, Chait, B.T, Asturias, F, Roeder, R.G. Deposit date: 2018-06-11 Release date: 2019-06-12 Last modified: 2019-12-04 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1. Nat. Struct. Mol. Biol., 25, 2018
8S5N	RNA polymerase II core initially transcribing complex with an ordered RNA of 12 nt Descriptor: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... Authors: Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. Deposit date: 2024-02-24 Release date: 2024-04-10 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024

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