Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7XYE
DownloadVisualize
BU of 7xye by Molmil
The apo structure of Orf1
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, N-formimidoyl fortimicin A synthase
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-06-01
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.482 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXC
DownloadVisualize
BU of 7xxc by Molmil
Orf1-glycine-glycylthricin complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-29
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.989 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXM
DownloadVisualize
BU of 7xxm by Molmil
Orf1-glycine-4-aminobutylthricin complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-30
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.119 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XX0
DownloadVisualize
BU of 7xx0 by Molmil
C281S glycylthricin complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-27
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XYL
DownloadVisualize
BU of 7xyl by Molmil
E426Q-glycine-glycylthricin complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-06-01
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7Y6E
DownloadVisualize
BU of 7y6e by Molmil
Crystal structure of sDscam FNIII23 domains, isoform Beta2v6
Descriptor: Dscam
Authors:Chen, Q, Yu, Y, Cheng, J.
Deposit date:2022-06-20
Release date:2023-05-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (3.034 Å)
Cite:Structural basis for the self-recognition of sDSCAM in Chelicerata.
Nat Commun, 14, 2023
1YZV
DownloadVisualize
BU of 1yzv by Molmil
HYPOTHETICAL PROTEIN FROM TRYPANOSOMA CRUZI
Descriptor: HYPOTHETICAL PROTEIN, SULFATE ION
Authors:Caruthers, J, Merritt, E.A, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2005-02-28
Release date:2005-03-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Crystal structures and proposed structural/functional classification of three protozoan proteins from the isochorismatase superfamily.
Protein Sci., 14, 2005
7XXD
DownloadVisualize
BU of 7xxd by Molmil
Orf1-sarcosine complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, N-formimidoyl fortimicin A synthase, SARCOSINE
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-29
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.982 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7Y0X
DownloadVisualize
BU of 7y0x by Molmil
Orf1-glycine complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-06-06
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XQA
DownloadVisualize
BU of 7xqa by Molmil
Orf1-glycine complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-07
Release date:2023-05-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXR
DownloadVisualize
BU of 7xxr by Molmil
Orf1 R342A-glycylthricin complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, N-formimidoyl fortimicin A synthase, [(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-30
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7XXP
DownloadVisualize
BU of 7xxp by Molmil
F316A-glycine-streptothricin F complex
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCINE, N-formimidoyl fortimicin A synthase, ...
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-05-30
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.052 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
8B07
DownloadVisualize
BU of 8b07 by Molmil
Crystal structure of monkeypox virus methyltransferase VP39 in complex with sinefungin
Descriptor: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, SINEFUNGIN
Authors:Silhan, J, Klima, M, Boura, E.
Deposit date:2022-09-07
Release date:2023-04-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery and structural characterization of monkeypox virus methyltransferase VP39 inhibitors reveal similarities to SARS-CoV-2 nsp14 methyltransferase.
Nat Commun, 14, 2023
4KH6
DownloadVisualize
BU of 4kh6 by Molmil
Toxoplasma gondii NTPDase1 C258S/C268S E493G crystallized with Mg and AMPNP
Descriptor: 5'-O-[(R)-hydroxy(phosphonoamino)phosphoryl]adenosine, MAGNESIUM ION, Nucleoside-triphosphatase 2
Authors:Krug, U, Totzauer, R, Strater, N.
Deposit date:2013-04-30
Release date:2013-11-06
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The ATP/ADP substrate specificity switch between Toxoplasma gondii NTPDase1 and NTPDase3 is caused by an altered mode of binding of the substrate base.
Chembiochem, 14, 2013
7YFC
DownloadVisualize
BU of 7yfc by Molmil
Cryo-EM structure of the histamine-bound histamine H4 receptor and Gq complex
Descriptor: CHOLESTEROL, Engineered G-alpha-q, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Im, D, Iwata, S, Asada, H.
Deposit date:2022-07-08
Release date:2023-10-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into the agonists binding and receptor selectivity of human histamine H 4 receptor.
Nat Commun, 14, 2023
7YFD
DownloadVisualize
BU of 7yfd by Molmil
Cryo-EM structure of the imetit-bound histamine H4 receptor and Gq complex
Descriptor: 2-(1~{H}-imidazol-5-yl)ethyl carbamimidothioate, CHOLESTEROL, Engineered G-alpha-q, ...
Authors:Im, D, Iwata, S, Asada, H.
Deposit date:2022-07-08
Release date:2023-10-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the agonists binding and receptor selectivity of human histamine H 4 receptor.
Nat Commun, 14, 2023
2BY4
DownloadVisualize
BU of 2by4 by Molmil
SR Ca(2+)-ATPase in the HnE2 state complexed with the thapsigargin derivative Boc-12ADT.
Descriptor: (3S,3AR,4S,6S,6AR,7S,8S,9BS)-6-(ACETYLOXY)-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-8-{[(2Z)-2-METHYLBUT-2-ENOYL]OXY}-7-(OCTANOYLOXY)-2-OXO-2,3,3A,4,5,6,6A,7,8,9B-DECAHYDROAZULENO[4,5-B]FURAN-4-YL 12-[(TERT-BUTOXYCARBONYL)AMINO]DODECANOATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Jensen, A.L, Moller, J.V, Soehoel, H, Denmeade, S.R, Isaacs, J.T, Olsen, C.E, Christensen, S.B, Nissen, P.
Deposit date:2005-07-28
Release date:2006-04-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Natural Products as Starting Materials for Development of Second-Generation Serca Inhibitors Targeted Towards Prostate Cancer Cells
Bioorg.Med.Chem., 14, 2006
2H6J
DownloadVisualize
BU of 2h6j by Molmil
Crystal Structure of the Beta F145A Rhodococcus Proteasome
Descriptor: Proteasome alpha-type subunit 1, Proteasome beta-type subunit 1
Authors:Kwon, Y.D.
Deposit date:2006-05-31
Release date:2006-08-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Proteasome assembly triggers a switch required for active-site maturation.
Structure, 14, 2006
6MJQ
DownloadVisualize
BU of 6mjq by Molmil
Crystal structure of the mCD1d/xxp (JJ295) /iNKTCR ternary complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Zajonc, D.M, Bitra, A, Janssens, J.
Deposit date:2018-09-21
Release date:2019-01-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:4"-O-Alkylated alpha-Galactosylceramide Analogues as iNKT-Cell Antigens: Synthetic, Biological, and Structural Studies.
ChemMedChem, 14, 2019
7Z8Q
DownloadVisualize
BU of 7z8q by Molmil
Cryo-EM structure of Mycobacterium tuberculosis RNA polymerase core
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Brodolin, K.
Deposit date:2022-03-18
Release date:2023-02-08
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Structural basis of the mycobacterial stress-response RNA polymerase auto-inhibition via oligomerization
Nat Commun, 14, 2023
7YPU
DownloadVisualize
BU of 7ypu by Molmil
OrfE-CoA-glycylthricin complex
Descriptor: Acetyltransferase, COENZYME A, [(2~{R},3~{R},4~{S},5~{R},6~{R})-6-[(~{E})-[(3~{a}~{S},7~{R},7~{a}~{S})-7-oxidanyl-4-oxidanylidene-3,3~{a},5,6,7,7~{a}-hexahydro-1~{H}-imidazo[4,5-c]pyridin-2-ylidene]amino]-5-(2-azanylethanoylamino)-2-(hydroxymethyl)-4-oxidanyl-oxan-3-yl] carbamate
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-08-04
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.357 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
7YPV
DownloadVisualize
BU of 7ypv by Molmil
Crystal structure of OrE-ST-F
Descriptor: Acetyltransferase, Streptothricin F
Authors:Wang, Y.L, Li, T.L.
Deposit date:2022-08-04
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.415 Å)
Cite:N-Formimidoylation/-iminoacetylation modification in aminoglycosides requires FAD-dependent and ligand-protein NOS bridge dual chemistry.
Nat Commun, 14, 2023
4KH5
DownloadVisualize
BU of 4kh5 by Molmil
Toxoplasma gondii NTPDase1 C258S/C268S in complex with Mg and AMPNP
Descriptor: 5'-O-[(R)-hydroxy(phosphonoamino)phosphoryl]adenosine, MAGNESIUM ION, Nucleoside-triphosphatase 2
Authors:Krug, U, Totzauer, R, Strater, N.
Deposit date:2013-04-30
Release date:2013-11-06
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:The ATP/ADP substrate specificity switch between Toxoplasma gondii NTPDase1 and NTPDase3 is caused by an altered mode of binding of the substrate base.
Chembiochem, 14, 2013
4KH4
DownloadVisualize
BU of 4kh4 by Molmil
Toxoplasma gondii NTPDase1 C258S/C268S in complex with Mg and AMPPNP
Descriptor: MAGNESIUM ION, Nucleoside-triphosphatase 2, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Krug, U, Totzauer, R, Strater, N.
Deposit date:2013-04-30
Release date:2013-11-06
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:The ATP/ADP substrate specificity switch between Toxoplasma gondii NTPDase1 and NTPDase3 is caused by an altered mode of binding of the substrate base.
Chembiochem, 14, 2013
1RP3
DownloadVisualize
BU of 1rp3 by Molmil
Cocrystal structure of the flagellar sigma/anti-sigma complex, Sigma-28/FlgM
Descriptor: RNA polymerase sigma factor SIGMA-28 (FliA), anti sigma factor FlgM
Authors:Sorenson, M.K, Ray, S.S, Darst, S.A.
Deposit date:2003-12-02
Release date:2004-04-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Flagellar Sigma/Anti-Sigma Complex Sigma(28)/FlgM Reveals an Intact Sigma Factor in an Inactive Conformation
Mol.Cell, 14, 2004

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon