Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QML
DownloadVisualize
BU of 6qml by Molmil
UCHL3 in complex with synthetic, K27-linked diubiquitin
Descriptor: 1,2-ETHANEDIOL, BROMIDE ION, CHLORIDE ION, ...
Authors:Murachelli, A.G, Sixma, T.K.
Deposit date:2019-02-07
Release date:2020-02-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:K27-Linked Diubiquitin Inhibits UCHL3 via an Unusual Kinetic Trap.
Cell Chem Biol, 28, 2021
6QN4
DownloadVisualize
BU of 6qn4 by Molmil
Death-associated Protein Kinase 1 (DAPK1) catalytic and auto-regulatory domains with S289E and S308E mutations
Descriptor: ACETATE ION, Death-associated protein kinase 1, GLYCEROL, ...
Authors:Huart, A.-S, Wilmanns, M.
Deposit date:2019-02-08
Release date:2019-08-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanisms behind DAPK regulation: how phosphorylation switches work
To Be Published
4UJ4
DownloadVisualize
BU of 4uj4 by Molmil
Crystal structure of human Rab11-Rabin8-FIP3
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Rab-3A-interacting protein, ...
Authors:Vetter, M, Lorentzen, E.
Deposit date:2015-04-08
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Structure of Rab11-FIP3-Rabin8 reveals simultaneous binding of FIP3 and Rabin8 effectors to Rab11.
Nat. Struct. Mol. Biol., 22, 2015
4UJ3
DownloadVisualize
BU of 4uj3 by Molmil
Crystal structure of human Rab11-Rabin8-FIP3
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RAB-3A-INTERACTING PROTEIN, ...
Authors:Vetter, M, Lorentzen, E.
Deposit date:2015-04-08
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of Rab11-Fip3-Rabin8 Reveals Simultaneous Binding of Fip3 and Rabin8 Effectors to Rab11.
Nat.Struct.Mol.Biol., 22, 2015
5LTA
DownloadVisualize
BU of 5lta by Molmil
Crystal structure of the Prp43-ADP-BeF3-U7-RNA complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, CACODYLATE ION, ...
Authors:Tauchert, M.J, Ficner, R.
Deposit date:2016-09-06
Release date:2017-01-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.621 Å)
Cite:Structural insights into the mechanism of the DEAH-box RNA helicase Prp43.
Elife, 6, 2017
6QXG
DownloadVisualize
BU of 6qxg by Molmil
Crystal structure of His-tag human thymidylate synthase (HT-hTS) in complex with FdUMP
Descriptor: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, SULFATE ION, Thymidylate synthase
Authors:Pozzi, C, Mangani, M.
Deposit date:2019-03-07
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities.
Molecules, 24, 2019
8RZL
DownloadVisualize
BU of 8rzl by Molmil
Sulfolobus acidocaldarius threads (0406) filament.
Descriptor: Sulfolobus acidocaldarius threads (0406) filament., alpha-D-mannopyranose, beta-D-glucopyranose-(1-4)-6-deoxy-6-sulfo-beta-D-glucopyranose-(1-3)-[alpha-D-mannopyranose-(1-4)][alpha-D-mannopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Isupov, M.N, Gaines, M, McLaren, M, Daum, B.
Deposit date:2024-02-12
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Sulfolobus acidocaldarius threads (0406) filament.
To Be Published
5LTP
DownloadVisualize
BU of 5ltp by Molmil
Structure of the Yellow-Green Fluorescent Protein mNeonGreen from Branchiostoma lanceolatum at the acidic pH 4.5
Descriptor: CHLORIDE ION, CITRATE ANION, mNeonGreen
Authors:Clavel, D, Gotthard, G, Royant, A.
Deposit date:2016-09-07
Release date:2016-12-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of the bright monomeric yellow-green fluorescent protein mNeonGreen obtained by directed evolution.
Acta Crystallogr D Struct Biol, 72, 2016
6QXS
DownloadVisualize
BU of 6qxs by Molmil
Crystal structure of Enteroccocus faecalis thymidylate synthase (EfTS) in complex with FdUMP
Descriptor: 5-FLUORO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE, N-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid, SULFATE ION, ...
Authors:Pozzi, C, Mangani, M.
Deposit date:2019-03-07
Release date:2019-04-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Structural Comparison ofEnterococcus faecalisand Human Thymidylate Synthase Complexes with the Substrate dUMP and Its Analogue FdUMP Provides Hints about Enzyme Conformational Variabilities.
Molecules, 24, 2019
6QP4
DownloadVisualize
BU of 6qp4 by Molmil
Structure of 299-452 fragment of the UspA1 protein from Moraxella catarrhalis
Descriptor: CHLORIDE ION, HEXANE-1,6-DIOL, UspA1, ...
Authors:Mikula, K.M, Kolodziejczyk, R, Goldman, A.
Deposit date:2019-02-13
Release date:2019-08-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the UspA1 protein fragment from Moraxella catarrhalis responsible for C3d binding.
J.Struct.Biol., 208, 2019
4UNX
DownloadVisualize
BU of 4unx by Molmil
Structure of the A_Equine_Newmarket_2_93 H3 haemagglutinin in complex with 3SLN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, H3 HAEMAGGLUTININ HA1 CHAIN, ...
Authors:Vachieri, S.G, Collins, P.J, Haire, L.F, Ogrodowicz, R.W, Martin, S.R, Walker, P.A, Xiong, X, Gamblin, S.J, Skehel, J.J.
Deposit date:2014-05-31
Release date:2014-07-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Recent Evolution of Equine Influenza and the Origin of Canine Influenza.
Proc.Natl.Acad.Sci.USA, 111, 2014
6QPJ
DownloadVisualize
BU of 6qpj by Molmil
Human CLOCK PAS-A domain
Descriptor: Circadian locomoter output cycles protein kaput
Authors:Kwon, H, Freeman, S.L, Moody, P.C.E, Raven, E.L, Basran, J.
Deposit date:2019-02-14
Release date:2019-09-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.315 Å)
Cite:Heme binding to human CLOCK affects interactions with the E-box.
Proc.Natl.Acad.Sci.USA, 116, 2019
8SJ9
DownloadVisualize
BU of 8sj9 by Molmil
Crystal structure of the H1 hemagglutinin COBRA X6
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Dzimianski, J.V, DuBois, R.M.
Deposit date:2023-04-17
Release date:2024-05-01
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural basis for the broad antigenicity of the computationally optimized influenza hemagglutinin X6.
Structure, 2024
5LD2
DownloadVisualize
BU of 5ld2 by Molmil
Cryo-EM structure of RecBCD+DNA complex revealing activated nuclease domain
Descriptor: Fork-Hairpin DNA (70-MER), MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Wilkinson, M, Chaban, Y, Wigley, D.B.
Deposit date:2016-06-23
Release date:2016-10-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.83 Å)
Cite:Mechanism for nuclease regulation in RecBCD.
Elife, 5, 2016
8ST5
DownloadVisualize
BU of 8st5 by Molmil
Streptococcus gordonii str. Challis Hsa bound to Neu5Ac
Descriptor: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, SODIUM ION, Streptococcal hemagglutinin
Authors:Morrison, K.M.A, Iverson, T.M.
Deposit date:2023-05-09
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Hsa Siglec +Unique Domains bound to Neu5Ac alpha2, 3 Gal
To Be Published
5LE2
DownloadVisualize
BU of 5le2 by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DDD_D12_15_D12_15_D12
Descriptor: ACETATE ION, DDD_D12_15_D12_15_D12, THIOCYANATE ION
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
6QPS
DownloadVisualize
BU of 6qps by Molmil
Structural characterization of a mannuronic acid specific polysaccharide family 6 lyase enzyme from human gut microbiota
Descriptor: ACETATE ION, CALCIUM ION, Polysaccharide Lyase Family 6
Authors:Fredslund, F, Stender, E.G.P, Svensson, B, Welner, D.H.
Deposit date:2019-02-14
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.287 Å)
Cite:Structural and functional aspects of mannuronic acid-specific PL6 alginate lyase from the human gut microbeBacteroides cellulosilyticus.
J.Biol.Chem., 294, 2019
5LEC
DownloadVisualize
BU of 5lec by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DDD_D12_12_D12_12_D12
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DDD_D12_12_D12_12_D12
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.506 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
6QQ4
DownloadVisualize
BU of 6qq4 by Molmil
Odorant-binding protein dmelOBP28a from Drosophila melanogaster
Descriptor: General odorant-binding protein 28a, MALONIC ACID, PENTAETHYLENE GLYCOL
Authors:Gonzalez, D, Neiers, F, Gotthard, G, Briand, L.
Deposit date:2019-02-17
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:The Drosophila odorant-binding protein 28a is involved in the detection of the floral odour ss-ionone.
Cell.Mol.Life Sci., 77, 2020
4W1X
DownloadVisualize
BU of 4w1x by Molmil
Crystal structure of 7,8-diaminopelargonic acid synthase (BioA) from Mycobacterium tuberculosis, complexed with 1-(4-(4-(3-chlorobenzoyl)piperazin-1-yl)phenyl)ethanone
Descriptor: 1,2-ETHANEDIOL, 1-{4-[4-(3-chlorobenzoyl)piperazin-1-yl]phenyl}ethanone, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, ...
Authors:Finzel, B.C, Dai, R.
Deposit date:2014-08-13
Release date:2015-02-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Target-Based Identification of Whole-Cell Active Inhibitors of Biotin Biosynthesis in Mycobacterium tuberculosis.
Chem.Biol., 22, 2015
6QQ6
DownloadVisualize
BU of 6qq6 by Molmil
Cryo-EM structure of dimeric quinol dependent nitric oxide reductase (qNOR) Val495Ala mutant from Alcaligenes xylosoxidans
Descriptor: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, CALCIUM ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Gopalasingam, C.C, Johnson, R.M, Chiduza, G.N, Tosha, T, Yamamoto, M, Shiro, Y, Antonyuk, S.V, Muench, S.P, Hasnain, S.S.
Deposit date:2019-02-17
Release date:2019-09-11
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Dimeric structures of quinol-dependent nitric oxide reductases (qNORs) revealed by cryo-electron microscopy.
Sci Adv, 5, 2019
6QRX
DownloadVisualize
BU of 6qrx by Molmil
X-ray radiation dose series on xylose isomerase - 3.88 MGy
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QVW
DownloadVisualize
BU of 6qvw by Molmil
Solution structure of the free FOXO1 DNA binding domain
Descriptor: Forkhead box protein O1
Authors:Psenakova, K, Obsil, T, Veverka, V, Obsilova, V, Kohoutova, K.
Deposit date:2019-03-05
Release date:2019-09-04
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Forkhead Domains of FOXO Transcription Factors Differ in both Overall Conformation and Dynamics.
Cells, 8, 2019
6QSX
DownloadVisualize
BU of 6qsx by Molmil
Complement factor B protease domain in complex with the reversible inhibitor ((2S,4S)-1-((5,7-dimethyl-1H-indol-4-yl)methyl)-4-methoxypiperidin-2-yl)methanol.
Descriptor: Complement factor B, SULFATE ION, ZINC ION, ...
Authors:Adams, C.M, Sellner, H, Ehara, T, Mac Sweeney, A, Crowley, M, Anderson, K, Karki, R, Mainolfi, N, Valeur, E, Sirockin, F, Gerhartz, B, Erbel, P, Hughes, N, Smith, T.M, Cumin, F, Argikar, U, Mogi, M, Sedrani, R, Wiesmann, C, Jaffee, B, Maibaum, J, Flohr, S, Harrison, R, Eder, J.
Deposit date:2019-02-22
Release date:2019-03-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Small-molecule factor B inhibitor for the treatment of complement-mediated diseases.
Proc.Natl.Acad.Sci.USA, 116, 2019
5LFX
DownloadVisualize
BU of 5lfx by Molmil
Lambda-[Ru(phen)2(dppz-11,12-Me)]2+ bound to a short substituted DNA sequence
Descriptor: BARIUM ION, DNA (5'-D(*(CBR)P*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*G)-3'), ...
Authors:Hall, J.P, Cardin, C.J.
Deposit date:2016-07-04
Release date:2017-02-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Guanine Can Direct Binding Specificity of Ru-dipyridophenazine (dppz) Complexes to DNA through Steric Effects.
Chemistry, 23, 2017

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon