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6VIO
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BU of 6vio by Molmil
Crystal structure of eYFP His148Ser
Descriptor: Green fluorescent protein GFP
Authors:Lieberman, R.L, Hill, S.E, Patterson-Orazem, A.C.
Deposit date:2020-01-13
Release date:2021-01-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Optically Modulated and Optically Activated Delayed Fluorescent Proteins through Dark State Engineering
J.Phys.Chem.B, 125, 2021
1FLR
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BU of 1flr by Molmil
4-4-20 FAB FRAGMENT
Descriptor: 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID, 4-4-20 (IG*G2A=KAPPA=) FAB FRAGMENT
Authors:Whitlow, M.
Deposit date:1995-01-19
Release date:1995-09-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:1.85 A structure of anti-fluorescein 4-4-20 Fab.
Protein Eng., 8, 1995
6GEL
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BU of 6gel by Molmil
The structure of TWITCH-2B
Descriptor: CALCIUM ION, FORMIC ACID, GLYCEROL, ...
Authors:Trigo Mourino, P, Paulat, M, Thestrup, T, Griesbeck, O, Griesinger, C, Becker, S.
Deposit date:2018-04-26
Release date:2019-08-21
Last modified:2019-09-11
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Dynamic tuning of FRET in a green fluorescent protein biosensor.
Sci Adv, 5, 2019
5F9G
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BU of 5f9g by Molmil
pnGFP1.5-Y.Cro: circularly permuted green fluorescent protein (with a tyrosine-derived chromophore)
Descriptor: pnGFP1.5-Y.Cro,Green fluorescent protein
Authors:Remington, S.J.
Deposit date:2015-12-09
Release date:2016-02-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.772 Å)
Cite:pnGFP: circularly permuted green fluorescent protein
To Be Published
7KLI
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BU of 7kli by Molmil
Crystal Structure of Enoyl-[acyl-carrier-protein] reductase [NADH] (InhA) from Mycobacterium abscessus
Descriptor: 1,2-ETHANEDIOL, Enoyl-[acyl-carrier-protein] reductase [NADH], SULFATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-10-30
Release date:2020-11-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Efficacy and Mode of Action of a Direct Inhibitor of Mycobacterium abscessus InhA.
Acs Infect Dis., 8, 2022
3LS3
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BU of 3ls3 by Molmil
Padron0.9-ON (fluorescent state)
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, Padron0.9, ...
Authors:Brakemann, T, Weber, G, Trowitzsch, S, Wahl, M.C, Jakobs, S.
Deposit date:2010-02-12
Release date:2010-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Molecular basis of the light-driven switching of the photochromic fluorescent protein Padron.
J.Biol.Chem., 285, 2010
7T7H
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BU of 7t7h by Molmil
Crystal structure of Vaccinia Virus decapping enzyme D9 in complex with inhibitor CP100356
Descriptor: 4-(6,7-dimethoxy-3,4-dihydroisoquinolin-2(1H)-yl)-N-[2-(3,4-dimethoxyphenyl)ethyl]-6,7-dimethoxyquinazolin-2-amine, DNA repair NTP-phosphohydrolase, SODIUM ION
Authors:Peters, J.K, Gross, J.D.
Deposit date:2021-12-15
Release date:2022-06-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.78000259 Å)
Cite:Fluorescence-Based Activity Screening Assay Reveals Small Molecule Inhibitors of Vaccinia Virus mRNA Decapping Enzyme D9.
Acs Chem.Biol., 17, 2022
4LUD
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BU of 4lud by Molmil
Crystal Structure of HCK in complex with the fluorescent compound SKF86002
Descriptor: 6-(4-fluorophenyl)-5-(pyridin-4-yl)-2,3-dihydroimidazo[2,1-b][1,3]thiazole, CALCIUM ION, CHLORIDE ION, ...
Authors:Parker, L.J, Tanaka, A, Handa, N, Honda, K, Tomabechi, Y, Shirouzu, M, Yokoyama, S.
Deposit date:2013-07-25
Release date:2014-02-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Kinase crystal identification and ATP-competitive inhibitor screening using the fluorescent ligand SKF86002.
Acta Crystallogr.,Sect.D, 70, 2014
7OWF
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BU of 7owf by Molmil
KlenTaq DNA polymerase in a ternary complex with primer/template and the fluorescent nucleotide analog BFdUTP
Descriptor: DNA polymerase I, thermostable, GLYCEROL, ...
Authors:Betz, K, Srivatsan, S.G.
Deposit date:2021-06-18
Release date:2022-06-29
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Microenvironment-Sensitive Fluorescent Nucleotide Probes from Benzofuran, Benzothiophene, and Selenophene as Substrates for DNA Polymerases.
J.Am.Chem.Soc., 144, 2022
7PEO
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BU of 7peo by Molmil
Structure of the Caulobacter crescentus S-layer protein RsaA N-terminal domain bound to LPS and soaked with Holmium
Descriptor: 4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-4-acetamido-4,6-dideoxy-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose, CALCIUM ION, HOLMIUM ATOM, ...
Authors:von Kugelgen, A, Bharat, T.A.M.
Deposit date:2021-08-11
Release date:2021-12-01
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.37 Å)
Cite:High-resolution mapping of metal ions reveals principles of surface layer assembly in Caulobacter crescentus cells.
Structure, 30, 2022
7U02
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BU of 7u02 by Molmil
Structure of the C. crescentus DriD C-domain bound to ssDNA
Descriptor: DNA (5'-D(P*AP*CP*G)-3'), SULFATE ION, WYL domain-containing protein
Authors:Schumacher, M.A.
Deposit date:2022-02-17
Release date:2022-06-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:ssDNA is an allosteric regulator of the C. crescentus SOS-independent DNA damage response transcription activator, DriD.
Genes Dev., 36, 2022
4LL5
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BU of 4ll5 by Molmil
Crystal Structure of Pim-1 in complex with the fluorescent compound SKF86002
Descriptor: 6-(4-fluorophenyl)-5-(pyridin-4-yl)-2,3-dihydroimidazo[2,1-b][1,3]thiazole, CALCIUM ION, GLYCEROL, ...
Authors:Parker, L.J, Tanaka, A, Handa, N, Honda, K, Tomabechi, Y, Shirouzu, M, Yokoyama, S.
Deposit date:2013-07-09
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Kinase crystal identification and ATP-competitive inhibitor screening using the fluorescent ligand SKF86002.
Acta Crystallogr.,Sect.D, 70, 2014
7U0M
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BU of 7u0m by Molmil
Crystal structure of a enoyl-[acyl-carrier-protein] reductase (InhA) from Mycobacterium abscessus bound to NAD and NITD-916
Descriptor: 6-[(4,4-dimethylcyclohexyl)methyl]-4-hydroxy-3-phenylpyridin-2(1H)-one, Enoyl-[acyl-carrier-protein] reductase [NADH], NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-02-18
Release date:2022-10-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Efficacy and Mode of Action of a Direct Inhibitor of Mycobacterium abscessus InhA.
Acs Infect Dis., 8, 2022
7AMU
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BU of 7amu by Molmil
Crystal structure of rsEGFP2 T204A in its fluorescent on-state
Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION
Authors:Moreno-Chicano, T, Schlichting, I, Hartmann, E, Zala, N, Colletier, J.-P, Weik, M.
Deposit date:2020-10-09
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of rsEGFP2 in its fluorescent on-state at pH 8.0
To Be Published
6D0T
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BU of 6d0t by Molmil
De novo design of a fluorescence-activating beta barrel - BB1
Descriptor: BB1
Authors:Dou, J, Vorobieva, A.A, Sheffler, W, Doyle, L.A, Park, H, Bick, M.J, Mao, B, Foight, G.W, Lee, M, Carter, L, Sankaran, B, Ovchinnikov, S, Marcos, E, Huang, P, Vaughan, J.C, Stoddard, B.L, Baker, D.
Deposit date:2018-04-10
Release date:2018-09-19
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:De novo design of a fluorescence-activating beta-barrel.
Nature, 561, 2018
7E53
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BU of 7e53 by Molmil
Crystal structure of sfGFP complexed with the nanobody nb2 at 2.2 Angstron resolution
Descriptor: Green fluorescent protein, Green fluorescent protein's nanobody nb2
Authors:Ding, Y, Zhong, P.Y.
Deposit date:2021-02-16
Release date:2021-10-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural insights into two distinct nanobodies recognizing the same epitope of green fluorescent protein.
Biochem.Biophys.Res.Commun., 565, 2021
7DTQ
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BU of 7dtq by Molmil
Apo Crystal Structure of Octaketide Synthase from A. arborescens
Descriptor: Octaketide synthase 1
Authors:Li, T.L, Adhikari, K, Li, Y.S.
Deposit date:2021-01-06
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Apo Crystal Structure of Octaketide synthase from Aloe arborescens.
To Be Published
6T3A
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BU of 6t3a by Molmil
Difference-refined structure of rsEGFP2 10 ns following 400-nm laser irradiation of the off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
5I7N
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BU of 5i7n by Molmil
MaoC-like dehydratase
Descriptor: MaoC-like dehydratase
Authors:Blaise, M.
Deposit date:2016-02-18
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Deletion of a dehydratase important for intracellular growth and cording renders rough Mycobacterium abscessus avirulent.
Proc.Natl.Acad.Sci.USA, 113, 2016
5F1E
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BU of 5f1e by Molmil
Apo protein of Sandercyanin
Descriptor: Sandercyanin Fluorescent Protein
Authors:Ghosh, S, Ramaswamy, S.
Deposit date:2015-11-30
Release date:2016-09-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Blue protein with red fluorescence
Proc.Natl.Acad.Sci.USA, 113, 2016
6B9C
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BU of 6b9c by Molmil
Superfolder Green Fluorescent Protein with 4-nitro-L-phenylalanine at the chromophore (position 66)
Descriptor: CARBON DIOXIDE, Green fluorescent protein
Authors:Phillips-Piro, C.M, Brewer, S.H, Olenginski, G.M, Piacentini, J.
Deposit date:2017-10-10
Release date:2018-10-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Structural and spectrophotometric investigation of two unnatural amino-acid altered chromophores in the superfolder green fluorescent protein
Acta Crystallogr.,Sect.D, 2021
5WTS
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BU of 5wts by Molmil
Green fluorescent protein linked MTide-02 inhibitor in complex with mdm2
Descriptor: E3 ubiquitin-protein ligase Mdm2, GLYCEROL, Green fluorescent protein linked MTide-02, ...
Authors:Wongsantichon, J, Robinson, R.C, Ghadessy, F.J.
Deposit date:2016-12-14
Release date:2017-12-20
Last modified:2020-11-25
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:Green fluorescent protein linked peptide inhibitor PMI in complex with mdm2
To Be Published
8U0F
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BU of 8u0f by Molmil
Bacterial fluorescent protein
Descriptor: Bacterial fluorescent protein alpha, Bacterial fluorescent protein beta, PHYCOCYANOBILIN, ...
Authors:Gully, B.S, Rossjohn, J.
Deposit date:2023-08-29
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Bacterial fluorescent protein
To Be Published
6PQ7
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BU of 6pq7 by Molmil
Structure of the iMango-III fluorescent aptamer at room temperature.
Descriptor: MAGNESIUM ION, POTASSIUM ION, RNA (37-MER), ...
Authors:Trachman III, R.J, Ferre-D'Amare, A.R.
Deposit date:2019-07-08
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Co-crystal structure of the iMango-III fluorescent RNA aptamer using an X-ray free-electron laser.
Acta Crystallogr.,Sect.F, 75, 2019
8GOS
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BU of 8gos by Molmil
Crystal structure of fluorescent protein RasM
Descriptor: RasM
Authors:Adachi, M, Kagotani, Y, Shimizu, R.
Deposit date:2022-08-25
Release date:2023-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Beat-frequency-resolved two-dimensional electronic spectroscopy: disentangling vibrational coherences in artificial fluorescent proteins with sub-10-fs visible laser pulses.
Opt Express, 31, 2023

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數據於2024-10-16公開中

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