Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3J0O
DownloadVisualize
BU of 3j0o by Molmil
Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2
Descriptor: 40S ribosomal RNA fragment, 60S ribosomal RNA fragment, Ribosomal protein L10a, ...
Authors:Budkevich, T, Giesebrecht, J, Altman, R, Munro, J, Mielke, T, Nierhaus, K, Blanchard, S, Spahn, C.M.
Deposit date:2011-10-05
Release date:2011-11-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Structure and dynamics of the Mammalian ribosomal pretranslocation complex.
Mol.Cell, 44, 2011
3J0Q
DownloadVisualize
BU of 3j0q by Molmil
Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2
Descriptor: 40S ribosomal RNA fragment, 60S ribosomal RNA fragment, Ribosomal protein L10, ...
Authors:Budkevich, T, Giesebrecht, J, Altman, R, Munro, J, Mielke, T, Nierhaus, K, Blanchard, S, Spahn, C.M.
Deposit date:2011-10-11
Release date:2011-11-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Structure and dynamics of the Mammalian ribosomal pretranslocation complex.
Mol.Cell, 44, 2011
3IYW
DownloadVisualize
BU of 3iyw by Molmil
West Nile virus in complex with Fab fragments of MAb CR4354 (fitted coordinates of envelope proteins and Fab fragments of one icosahedral ASU)
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-alpha-D-glucopyranose, CR4354 Fab fragment X1, heavy chain H, ...
Authors:Rossmann, M.G, Kaufmann, B.
Deposit date:2010-06-18
Release date:2010-11-24
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (13.7 Å)
Cite:Neutralization of West Nile virus by cross-linking of its surface proteins with Fab fragments of the human monoclonal antibody CR4354.
Proc.Natl.Acad.Sci.USA, 107, 2010
3J0P
DownloadVisualize
BU of 3j0p by Molmil
Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1
Descriptor: 40S ribosomal RNA fragment, 60S ribosomal RNA fragment, Ribosomal protein L10a, ...
Authors:Budkevich, T, Giesebrecht, J, Altman, R, Munro, J, Mielke, T, Nierhaus, K, Blanchard, S, Spahn, C.M.
Deposit date:2011-10-06
Release date:2011-11-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Structure and dynamics of the Mammalian ribosomal pretranslocation complex.
Mol.Cell, 44, 2011
3J5M
DownloadVisualize
BU of 3j5m by Molmil
Cryo-EM structure of the BG505 SOSIP.664 HIV-1 Env trimer with 3 PGV04 Fabs
Descriptor: BG505 SOSIP gp120, BG505 SOSIP gp41, PGV04 heavy chain, ...
Authors:Lyumkis, D, Julien, J.-P, Wilson, I.A, Ward, A.B.
Deposit date:2013-10-26
Release date:2013-11-13
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Cryo-EM structure of a fully glycosylated soluble cleaved HIV-1 envelope trimer.
Science, 342, 2013
3JCG
DownloadVisualize
BU of 3jcg by Molmil
Cryo-EM structure of the magnesium channel CorA in the magnesium-free, asymmetric open state I
Descriptor: Magnesium transport protein CorA
Authors:Matthies, D, Perozo, E, Subramaniam, S.
Deposit date:2015-12-11
Release date:2016-02-17
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.06 Å)
Cite:Cryo-EM Structures of the Magnesium Channel CorA Reveal Symmetry Break upon Gating.
Cell(Cambridge,Mass.), 164, 2016
3JZ7
DownloadVisualize
BU of 3jz7 by Molmil
Crystal structure of the extracellular domains of coxsackie & adenovirus receptor from mouse (mCAR)
Descriptor: Coxsackievirus and adenovirus receptor homolog, ISOPROPYL ALCOHOL
Authors:Max, K.E.A, Heinemann, U.
Deposit date:2009-09-23
Release date:2010-03-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The coxsackievirus-adenovirus receptor reveals complex homophilic and heterophilic interactions on neural cells.
J.Neurosci., 30, 2010
8FDM
DownloadVisualize
BU of 8fdm by Molmil
Human Hemoglobin in Complex with Nitrosomethane
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Powell, S.M, Richter-Addo, G.B, Thomas, L.M.
Deposit date:2022-12-03
Release date:2023-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin.
J.Inorg.Biochem., 246, 2023
3J8F
DownloadVisualize
BU of 3j8f by Molmil
Cryo-EM reconstruction of poliovirus-receptor complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, ...
Authors:Strauss, M, Filman, D.J, Belnap, D.M, Cheng, N, Noel, R.T, Hogle, J.M.
Deposit date:2014-10-20
Release date:2015-02-11
Last modified:2022-12-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Nectin-Like Interactions between Poliovirus and Its Receptor Trigger Conformational Changes Associated with Cell Entry.
J.Virol., 89, 2015
3JBS
DownloadVisualize
BU of 3jbs by Molmil
eL6 protein from yeast 60S ribosomal subunit
Descriptor: eL6
Authors:Passos, D.O, Lyumkis, D.
Deposit date:2015-10-13
Release date:2015-10-28
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Single-particle cryoEM analysis at near-atomic resolution from several thousand asymmetric subunits.
J.Struct.Biol., 192, 2015
3JCA
DownloadVisualize
BU of 3jca by Molmil
Core model of the Mouse Mammary Tumor Virus intasome
Descriptor: 5'-D(*AP*AP*TP*GP*CP*CP*GP*CP*AP*GP*TP*CP*GP*GP*CP*CP*GP*AP*CP*CP*TP*G)-3', 5'-D(*CP*AP*GP*GP*TP*CP*GP*GP*CP*CP*GP*AP*CP*TP*GP*CP*GP*GP*CP*A)-3', Integrase, ...
Authors:Lyumkis, D.L, Ballandras-Colas, A, Brown, M, Cook, N.J, Dewdney, T.G, Demeler, B, Cherepanov, P, Engelman, A.N.
Deposit date:2015-11-24
Release date:2016-02-17
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cryo-EM reveals a novel octameric integrase structure for betaretroviral intasome function.
Nature, 530, 2016
8FDL
DownloadVisualize
BU of 8fdl by Molmil
Human Hemoglobin with Nitrosochloramphenicol
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Powell, S.M, Richter-Addo, G.B, Thomas, L.M.
Deposit date:2022-12-03
Release date:2023-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin.
J.Inorg.Biochem., 246, 2023
8FDN
DownloadVisualize
BU of 8fdn by Molmil
Human Hemoglobin with N-tertbutylhydroxylamine
Descriptor: GLYCEROL, Hemoglobin subunit alpha, Hemoglobin subunit beta, ...
Authors:Powell, S.M, Richter-Addo, G.B, Thomas, L.M.
Deposit date:2022-12-03
Release date:2023-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structural investigations of heme protein derivatives resulting from reactions of aryl- and alkylhydroxylamines with human hemoglobin.
J.Inorg.Biochem., 246, 2023
3JCF
DownloadVisualize
BU of 3jcf by Molmil
Cryo-EM structure of the magnesium channel CorA in the closed symmetric magnesium-bound state
Descriptor: MAGNESIUM ION, Magnesium transport protein CorA
Authors:Matthies, D, Perozo, E, Subramaniam, S.
Deposit date:2015-12-11
Release date:2016-02-17
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM Structures of the Magnesium Channel CorA Reveal Symmetry Break upon Gating.
Cell(Cambridge,Mass.), 164, 2016
6VZK
DownloadVisualize
BU of 6vzk by Molmil
Crystal structure of human CaMKII-alpha (CAMK2A)kinase domain
Descriptor: 4'-HYDROXYCINNAMIC ACID, Calcium/calmodulin-dependent protein kinase type II subunit alpha
Authors:Ozden, C, Stratton, M.M, Garman, S.C.
Deposit date:2020-02-28
Release date:2020-04-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Characterization of CaMKII alpha holoenzyme stability.
Protein Sci., 29, 2020
3JAU
DownloadVisualize
BU of 3jau by Molmil
The cryoEM map of EV71 mature viron in complex with the Fab fragment of antibody D5
Descriptor: Capsid protein VP1, Heavy chain of Fab fragment variable region of antibody D5, Light chain of Fab fragment variable region of antibody D5
Authors:Fan, C, Ye, X.H, Ku, Z.Q, Zuo, T, Kong, L.L, Zhang, C, Shi, J.P, Liu, Q.W, Chen, T, Zhang, Y.Y, Jiang, W, Zhang, L.Q, Huang, Z, Cong, Y.
Deposit date:2015-06-24
Release date:2016-02-10
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural Basis for Recognition of Human Enterovirus 71 by a Bivalent Broadly Neutralizing Monoclonal Antibody
Plos Pathog., 12, 2016
6W54
DownloadVisualize
BU of 6w54 by Molmil
Crystal Structure of Gallic Acid Decarboxylase from Arxula adeninivorans
Descriptor: 4-NITROCATECHOL, COBALT (II) ION, Gallate decarboxylase, ...
Authors:Zeug, M, Marckovic, N, Iancu, C.V, Tripp, J, Oreb, M, Choe, J.
Deposit date:2020-03-12
Release date:2021-02-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of non-oxidative decarboxylases reveal a new mechanism of action with a catalytic dyad and structural twists.
Sci Rep, 11, 2021
3JCH
DownloadVisualize
BU of 3jch by Molmil
Cryo-EM structure of the magnesium channel CorA in the magnesium-free, asymmetric open state II
Descriptor: Magnesium transport protein CorA
Authors:Matthies, D, Perozo, E, Subramaniam, S.
Deposit date:2015-12-11
Release date:2016-02-17
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (7.06 Å)
Cite:Cryo-EM Structures of the Magnesium Channel CorA Reveal Symmetry Break upon Gating.
Cell(Cambridge,Mass.), 164, 2016
3JAJ
DownloadVisualize
BU of 3jaj by Molmil
Structure of the engaged state of the mammalian SRP-ribosome complex
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Voorhees, R.M, Hegde, R.S.
Deposit date:2015-06-16
Release date:2015-08-05
Last modified:2022-09-07
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structures of the scanning and engaged states of the mammalian SRP-ribosome complex.
Elife, 4, 2015
3JAN
DownloadVisualize
BU of 3jan by Molmil
Structure of the scanning state of the mammalian SRP-ribosome complex
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Voorhees, R.M, Hegde, R.S.
Deposit date:2015-06-17
Release date:2015-08-05
Last modified:2015-12-30
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Structures of the scanning and engaged states of the mammalian SRP-ribosome complex.
Elife, 4, 2015
6V2D
DownloadVisualize
BU of 6v2d by Molmil
Crystal Structure of chromodomain of CDYL2 in complex with inhibitor UNC3866
Descriptor: Chromodomain Y-like protein 2, UNC3866, UNKNOWN ATOM OR ION
Authors:Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2019-11-22
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for the Binding Selectivity of Human CDY Chromodomains.
Cell Chem Biol, 27, 2020
3KK5
DownloadVisualize
BU of 3kk5 by Molmil
Crystal structure of PBCV-1 VP54 fitted into a cryo-EM reconstruction of the virophage Sputnik
Descriptor: Major capsid protein
Authors:Sun, S, Rossmann, M.G.
Deposit date:2009-11-04
Release date:2009-11-17
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (10.6 Å)
Cite:Structural studies of the sputnik virophage.
J.Virol., 84, 2010
3KTL
DownloadVisualize
BU of 3ktl by Molmil
Crystal Structure of an I71A human GSTA1-1 mutant in complex with S-hexylglutathione
Descriptor: Glutathione S-transferase A1, S-HEXYLGLUTATHIONE
Authors:Achilonu, I.A, Gildenhuys, S, Fernandes, M.A, Fanucchi, S, Dirr, H.W.
Deposit date:2009-11-25
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The role of a topologically conserved isoleucine in glutathione transferase structure, stability and function.
Acta Crystallogr.,Sect.F, 66, 2010
6X3Z
DownloadVisualize
BU of 6x3z by Molmil
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GAMMA-AMINO-BUTANOIC ACID, ...
Authors:Kim, J.J, Gharpure, A, Teng, J, Zhuang, Y, Howard, R.J, Zhu, S, Noviello, C.M, Walsh, R.M, Lindahl, E, Hibbs, R.E.
Deposit date:2020-05-21
Release date:2020-09-09
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Shared structural mechanisms of general anaesthetics and benzodiazepines.
Nature, 585, 2020
6X3V
DownloadVisualize
BU of 6x3v by Molmil
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus etomidate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Etomidate, ...
Authors:Kim, J.J, Gharpure, A, Teng, J, Zhuang, Y, Howard, R.J, Zhu, S, Noviello, C.M, Walsh, R.M, Lindahl, E, Hibbs, R.E.
Deposit date:2020-05-21
Release date:2020-09-09
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Shared structural mechanisms of general anaesthetics and benzodiazepines.
Nature, 585, 2020

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon