Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8IAM
DownloadVisualize
BU of 8iam by Molmil
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3D) complex
Descriptor: Chimera of Long chain base biosynthesis protein 1 and Serine palmitoyltransferase 1, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Xie, T, Gong, X.
Deposit date:2023-02-08
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Collaborative regulation of yeast SPT-Orm2 complex by phosphorylation and ceramide.
Cell Rep, 43, 2024
4MGR
DownloadVisualize
BU of 4mgr by Molmil
The crystal structure of Bacillus subtilis GabR, an autorepressor and PLP- and GABA-dependent transcriptional activator of gabT
Descriptor: ACETATE ION, HTH-type transcriptional regulatory protein GabR, IMIDAZOLE, ...
Authors:Wu, R, Edayathumangalam, R, Garcia, R, Wang, Y, Wang, W, Kreinbring, C.A, Bach, A, Liao, J, Stone, T, Terwilliger, T, Hoang, Q.Q, Belitsky, B.R, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2013-08-28
Release date:2013-10-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of gabT.
Proc.Natl.Acad.Sci.USA, 110, 2013
4N0B
DownloadVisualize
BU of 4n0b by Molmil
Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of GabT
Descriptor: ACETYL GROUP, CALCIUM ION, HTH-type transcriptional regulatory protein GabR, ...
Authors:Edayathumangalam, R, Wu, R, Garcia, R, Wang, Y, Wang, W, Kreinbring, C.A, Bach, A, Liao, J, Stone, T, Terwilliger, T, Hoang, Q.Q, Belitsky, B.R, Petsko, G.A, Ringe, D, Liu, D.
Deposit date:2013-10-01
Release date:2013-10-30
Last modified:2014-04-02
Method:X-RAY DIFFRACTION (2.705 Å)
Cite:Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of gabT.
Proc.Natl.Acad.Sci.USA, 110, 2013
8IAK
DownloadVisualize
BU of 8iak by Molmil
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A-N71A) complex
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Protein ORM2, Serine palmitoyltransferase 2, ...
Authors:Xie, T, Gong, X.
Deposit date:2023-02-08
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Collaborative regulation of yeast SPT-Orm2 complex by phosphorylation and ceramide.
Cell Rep, 43, 2024
8IAJ
DownloadVisualize
BU of 8iaj by Molmil
Cryo-EM structure of the yeast SPT-ORM2 (ORM2-S3A) complex
Descriptor: N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, PYRIDOXAL-5'-PHOSPHATE, Protein ORM2, ...
Authors:Xie, T, Gong, X.
Deposit date:2023-02-08
Release date:2024-02-14
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Collaborative regulation of yeast SPT-Orm2 complex by phosphorylation and ceramide.
Cell Rep, 43, 2024
4TV7
DownloadVisualize
BU of 4tv7 by Molmil
Crystal structure of Bacillus subtilis GabR at 2.05 Angstroms resolution
Descriptor: HTH-type transcriptional regulatory protein GabR
Authors:Goto, M, Okuda, K, Yoshimura, T.
Deposit date:2014-06-26
Release date:2014-12-24
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Role of the aminotransferase domain in Bacillus subtilis GabR, a pyridoxal 5'-phosphate-dependent transcriptional regulator
Mol. Microbiol., 95, 2015
6M4O
DownloadVisualize
BU of 6m4o by Molmil
Cryo-EM structure of the monomeric SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-03-08
Release date:2021-02-10
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
6M4N
DownloadVisualize
BU of 6m4n by Molmil
Cryo-EM structure of the dimeric SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-03-07
Release date:2021-02-10
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7CQI
DownloadVisualize
BU of 7cqi by Molmil
Cryo-EM structure of the substrate-bound SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, Serine palmitoyltransferase 1, Serine palmitoyltransferase 2, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-08-11
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7CQK
DownloadVisualize
BU of 7cqk by Molmil
Cryo-EM structure of the substrate-bound SPT-ORMDL3 complex
Descriptor: ORM1-like protein 3, Serine palmitoyltransferase 1, Serine palmitoyltransferase 2, ...
Authors:Li, S.S, Xie, T, Wang, L, Gong, X.
Deposit date:2020-08-11
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the assembly and substrate selectivity of human SPT-ORMDL3 complex.
Nat.Struct.Mol.Biol., 28, 2021
7YJ1
DownloadVisualize
BU of 7yj1 by Molmil
Cryo-EM structure of SPT-ORMDL3 (ORMDL3-deltaN2) complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-19
Release date:2023-07-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Ceramide sensing by human SPT-ORMDL complex for establishing sphingolipid homeostasis.
Nat Commun, 14, 2023
7YIU
DownloadVisualize
BU of 7yiu by Molmil
Cryo-EM structure of the C6-ceramide-bound SPT-ORMDL3 complex
Descriptor: HEXADECANE, N-((E,2S,3R)-1,3-DIHYDROXYOCTADEC-4-EN-2-YL)HEXANAMIDE, ORM1-like protein 3, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-18
Release date:2023-07-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Ceramide sensing by human SPT-ORMDL complex for establishing sphingolipid homeostasis.
Nat Commun, 14, 2023
7YJ2
DownloadVisualize
BU of 7yj2 by Molmil
Cryo-EM structure of SPT-ORMDL3 (ORMDL3-N13A) complex
Descriptor: ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-19
Release date:2023-07-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Ceramide sensing by human SPT-ORMDL complex for establishing sphingolipid homeostasis.
Nat Commun, 14, 2023
7YJM
DownloadVisualize
BU of 7yjm by Molmil
Cryo-EM structure of the monomeric atSPT-ORM1 complex
Descriptor: Long chain base biosynthesis protein 2a, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, ORMDL family protein, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-20
Release date:2023-04-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
Sci Adv, 9, 2023
7YJO
DownloadVisualize
BU of 7yjo by Molmil
Cryo-EM structure of the monomeric atSPT-ORM1 (LCB2a-deltaN5) complex
Descriptor: Long chain base biosynthesis protein 2a, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, ORMDL family protein, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-20
Release date:2023-04-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
Sci Adv, 9, 2023
7YJN
DownloadVisualize
BU of 7yjn by Molmil
Cryo-EM structure of the monomeric atSPT-ORM1 (ORM1-N17A) complex
Descriptor: Long chain base biosynthesis protein 1, Long chain base biosynthesis protein 2a, ORMDL family protein, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-20
Release date:2023-04-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
Sci Adv, 9, 2023
7YJK
DownloadVisualize
BU of 7yjk by Molmil
Cryo-EM structure of the dimeric atSPT-ORM1 complex
Descriptor: Long chain base biosynthesis protein 1, Long chain base biosynthesis protein 2a, N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-20
Release date:2023-04-05
Last modified:2023-04-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Mechanism of sphingolipid homeostasis revealed by structural analysis of Arabidopsis SPT-ORM1 complex.
Sci Adv, 9, 2023
7YIY
DownloadVisualize
BU of 7yiy by Molmil
Cryo-EM structure of SPT-ORMDL3 complex
Descriptor: N-[(2S,3R,4E)-1,3-dihydroxyoctadec-4-en-2-yl]tetracosanamide, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Xie, T, Liu, P, Gong, X.
Deposit date:2022-07-18
Release date:2023-07-05
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Ceramide sensing by human SPT-ORMDL complex for establishing sphingolipid homeostasis.
Nat Commun, 14, 2023
7K0O
DownloadVisualize
BU of 7k0o by Molmil
Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa/ORMDL3, class 3
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0K
DownloadVisualize
BU of 7k0k by Molmil
Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa, 3KS-bound
Descriptor: 3-Dehydrosphinganine, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0N
DownloadVisualize
BU of 7k0n by Molmil
Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa/ORMDL3, class 2
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0J
DownloadVisualize
BU of 7k0j by Molmil
Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa protomer
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0Q
DownloadVisualize
BU of 7k0q by Molmil
Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa/ORMDL3, myriocin-bound
Descriptor: Myriocin, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0L
DownloadVisualize
BU of 7k0l by Molmil
Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa, myriocin-bound
Descriptor: Myriocin, PYRIDOXAL-5'-PHOSPHATE, Serine palmitoyltransferase 1, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021
7K0P
DownloadVisualize
BU of 7k0p by Molmil
Human serine palmitoyltransferase complex SPTLC1/SPLTC2/ssSPTa/ORMDL3, class 4
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, ORM1-like protein 3, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Wang, Y, Niu, Y, Zhang, Z, Zhao, H, Myasnikov, A, Kalathur, R, Lee, C.H.
Deposit date:2020-09-04
Release date:2021-02-24
Last modified:2021-03-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the regulation of human serine palmitoyltransferase complexes.
Nat.Struct.Mol.Biol., 28, 2021

221371

數據於2024-06-19公開中

PDB statisticsPDBj update infoContact PDBjnumon