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PDB: 245663 results Info pages Status search Chemie search BIRD

Drug Resistant HIV-1 Protease (L10F, V32I, L33F, K45I, A71V, V82I, I84V) in Complex with DRV
Descriptor:	(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease, SULFATE ION
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-11-09
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.93 Å)
Cite:	Drug Resistant HIV-1 Protease (L10F, V32I, L33F, K45I, A71V, V82I, I84V) in Complex with DRV To Be Published

7MAS

Drug Resistant HIV-1 Protease (L10F, M46I, I50V, F53L, L63P, G73S) in Complex with DRV
Descriptor:	(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-11-09
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Drug Resistant HIV-1 Protease (L10F, M46I, I50V, F53L, L63P, G73S) in Complex with DRV To Be Published

7MAP

Drug Resistant HIV-1 Protease (L10I, V32I, L33F, K45I, M46I, I50V, A71V, V82I, I84V) in Complex with DRV
Descriptor:	(3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Protease
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-11-09
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.951 Å)
Cite:	Drug Resistant HIV-1 Protease (L10I, V32I, L33F, K45I, M46I, I50V, A71V, V82I, I84V) in Complex with DRV To Be Published

7MA5

HIV-1 Protease (I84V) in Complex with UMass4
Descriptor:	(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-3-{(1,3-benzodioxol-5-ylsulfonyl)[(2S)-2-methylbutyl]amino}-1-benzyl-2-hydroxypropyl]carbamate, Protease, SULFATE ION
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-11-09
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.977 Å)
Cite:	HIV-1 Protease (I84V) in Complex with UMass4 To Be Published

7MA3

HIV-1 Protease (I84V) in Complex with UMass2
Descriptor:	(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-1-benzyl-2-hydroxy-3-{[(4-methoxyphenyl)sulfonyl][(2S)-2-methylbutyl]amino}propyl]carbamate, Protease, SULFATE ION
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-11-09
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.969 Å)
Cite:	HIV-1 Protease (I84V) in Complex with UMass2 To Be Published

6QON

Crystal structure of TrmD, a tRNA-(N1G37) methyltransferase, from Mycobacterium abscessus in complex with Fragment 17 (2H-1,3-Benzoxazine-2,4(3H)-dione)
Descriptor:	1,3-benzoxazine-2,4-dione, SULFATE ION, tRNA (guanine-N(1)-)-methyltransferase
Authors:	Thomas, S.E, Whitehouse, A.J, Coyne, A.G, Abell, C, Mendes, V, Blundell, T.L.
Deposit date:	2019-02-12
Release date:	2020-02-26
Last modified:	2024-05-15
Method:	X-RAY DIFFRACTION (1.81 Å)
Cite:	Fragment-based discovery of a new class of inhibitors targeting mycobacterial tRNA modification. Nucleic Acids Res., 48, 2020

8D47

fp.006 Fab in complex with SARS-CoV-2 Fusion Peptide
Descriptor:	1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:	Abernathy, M.E, Barnes, C.O.
Deposit date:	2022-06-01
Release date:	2022-12-21
Last modified:	2024-10-23
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Human neutralizing antibodies to cold linear epitopes and subdomain 1 of the SARS-CoV-2 spike glycoprotein. Sci Immunol, 8, 2023

5MIW

X-ray structure uridine phosphorylase from Vibrio cholerae in complex with uracil at 1.28 A.
Descriptor:	1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:	Prokofev, I.I, Lashkov, A.A, Balaev, V.V, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M.
Deposit date:	2016-11-29
Release date:	2017-12-20
Last modified:	2024-01-17
Method:	X-RAY DIFFRACTION (1.28 Å)
Cite:	X-ray structure uridine phosphorylase from Vibrio cholerae in complex with uracil at 1.28 A. To Be Published

5MMZ

Structure of PRL-1 in complex with the Bateman domain of CNNM2
Descriptor:	Metal transporter CNNM2, Protein tyrosine phosphatase type IVA 1
Authors:	Gimenez-Mascarell, P, Oyenarte, I, Hardy, S, Breiderhoff, T, Stuiver, M, Kostantin, E, Diercks, T, Pey, A.L, Ereno-Orbea, J, Martinez-Chantar, M.L, Khalaf-Nazzal, R, Claverie-Martin, F, Muller, D, Tremblay, M.L, Martinez-Cruz, L.A.
Deposit date:	2016-12-12
Release date:	2016-12-21
Last modified:	2024-11-06
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Structural Basis of the Oncogenic Interaction of Phosphatase PRL-1 with the Magnesium Transporter CNNM2. J. Biol. Chem., 292, 2017

7LF1

Trimeric human Arginase 1 in complex with mAb3
Descriptor:	Arginase-1, MANGANESE (II) ION, mAb3 heavy chain, ...
Authors:	Gomez-Llorente, Y, Scapin, G, Palte, R.L.
Deposit date:	2021-01-15
Release date:	2021-09-01
Last modified:	2024-10-23
Method:	ELECTRON MICROSCOPY (4.04 Å)
Cite:	Cryo-EM structures of inhibitory antibodies complexed with arginase 1 provide insight into mechanism of action. Commun Biol, 4, 2021

6HNC

Trypanosoma brucei PTR1 in complex with cycloguanil
Descriptor:	1-(4-chlorophenyl)-6,6-dimethyl-1,6-dihydro-1,3,5-triazine-2,4-diamine, ACETATE ION, DIMETHYL SULFOXIDE, ...
Authors:	Landi, G, Pozzi, C, Mangani, S.
Deposit date:	2018-09-14
Release date:	2019-05-08
Last modified:	2024-01-24
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Structural Insights into the Development of Cycloguanil Derivatives asTrypanosoma bruceiPteridine-Reductase-1 Inhibitors. Acs Infect Dis., 5, 2019

8CX2

Cryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC dimeric complex in State 2
Descriptor:	Core-binding factor subunit beta, DNA dC->dU-editing enzyme APOBEC-3G, Elongin-B, ...
Authors:	Li, Y, Langley, C, Azumaya, C.M, Echeverria, I, Chesarino, N.M, Emerman, M, Cheng, Y, Gross, J.D.
Deposit date:	2022-05-19
Release date:	2023-02-15
Last modified:	2024-06-12
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	The structural basis for HIV-1 Vif antagonism of human APOBEC3G. Nature, 615, 2023

8CX0

Cryo-EM structure of human APOBEC3G/HIV-1 Vif/CBFbeta/ELOB/ELOC monomeric complex
Descriptor:	Core-binding factor subunit beta, DNA dC->dU-editing enzyme APOBEC-3G, Elongin-B, ...
Authors:	Li, Y, Langley, C, Azumaya, C.M, Echeverria, I, Chesarino, N.M, Emerman, M, Cheng, Y, Gross, J.D.
Deposit date:	2022-05-19
Release date:	2023-02-15
Last modified:	2024-06-12
Method:	ELECTRON MICROSCOPY (2.7 Å)
Cite:	The structural basis for HIV-1 Vif antagonism of human APOBEC3G. Nature, 615, 2023

5LXC

Crystal structure of DYRK2 in complex with EHT 5372 (Compound 1)
Descriptor:	1,2-ETHANEDIOL, Dual specificity tyrosine-phosphorylation-regulated kinase 2, methyl 9-[(2,4-dichlorophenyl)amino]-[1,3]thiazolo[5,4-f]quinazoline-2-carboximidate
Authors:	Chaikuad, A, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Besson, T, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:	2016-09-20
Release date:	2016-10-26
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (2.15 Å)
Cite:	An Unusual Binding Model of the Methyl 9-Anilinothiazolo[5,4-f] quinazoline-2-carbimidates (EHT 1610 and EHT 5372) Confers High Selectivity for Dual-Specificity Tyrosine Phosphorylation-Regulated Kinases. J. Med. Chem., 59, 2016

8CTA

Minimal 2:2 Ternary Complex between BI-224436 bound HIV-1 Integrase Catalytic Core Domain Dimer and Carboxy Terminal Domains
Descriptor:	(2S)-tert-butoxy[4-(2,3-dihydropyrano[4,3,2-de]quinolin-7-yl)-2-methylquinolin-3-yl]acetic acid, 1,2-ETHANEDIOL, Integrase
Authors:	Gupta, K, Van Duyne, G.D, Eilers, G, Bushman, F.D.
Deposit date:	2022-05-13
Release date:	2023-02-22
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.93 Å)
Cite:	Structure of a HIV-1 IN-Allosteric inhibitor complex at 2.93 angstrom resolution: Routes to inhibitor optimization. Plos Pathog., 19, 2023

9MEC

Crystal Structure of Pyrophosphate-fructose 6-phosphate 1-phosphotransferase 1 (Pfk1) from Trichomonas vaginalis (AMP/alpha-D-Glucose-6-phosphate complex)
Descriptor:	6-O-phosphono-alpha-D-glucopyranose, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ...
Authors:	Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:	2024-12-06
Release date:	2024-12-18
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Crystal Structure of Pyrophosphate-fructose 6-phosphate 1-phosphotransferase 1 (Pfk1) from Trichomonas vaginalis (AMP/alpha-D-Glucose-6-phosphate complex) To be published

8CT7

Catalytic Core Domain of HIV-1 Integrase (F185K) bound with BI-224436
Descriptor:	(2S)-tert-butoxy[4-(2,3-dihydropyrano[4,3,2-de]quinolin-7-yl)-2-methylquinolin-3-yl]acetic acid, 1,2-ETHANEDIOL, Integrase, ...
Authors:	Gupta, K, Van Duyne, G.D, Eilers, G, Bushman, F.D.
Deposit date:	2022-05-13
Release date:	2023-02-15
Last modified:	2024-10-09
Method:	X-RAY DIFFRACTION (2.13 Å)
Cite:	Structure of a HIV-1 IN-Allosteric inhibitor complex at 2.93 angstrom resolution: Routes to inhibitor optimization. Plos Pathog., 19, 2023

8RUC

ACTIVATED SPINACH RUBISCO COMPLEXED WITH 2-CARBOXYARABINITOL BISPHOSPHATE
Descriptor:	2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE
Authors:	Andersson, I, Knight, S, Branden, C.-I.
Deposit date:	1996-02-22
Release date:	1996-08-01
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Large structures at high resolution: the 1.6 A crystal structure of spinach ribulose-1,5-bisphosphate carboxylase/oxygenase complexed with 2-carboxyarabinitol bisphosphate. J.Mol.Biol., 259, 1996

3ETC

2.1 A structure of acyl-adenylate synthetase from Methanosarcina acetivorans containing a link between Lys256 and Cys298
Descriptor:	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMP-binding protein, FORMYL GROUP, ...
Authors:	Shah, M.B, Gulick, A.M, Smith, K.S, Ingram-Smith, C.
Deposit date:	2008-10-07
Release date:	2009-07-07
Last modified:	2023-12-27
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	The 2.1 A crystal structure of an acyl-CoA synthetase from Methanosarcina acetivorans reveals an alternate acyl-binding pocket for small branched acyl substrates. Proteins, 77, 2009

7M9W

HIV-1 Protease (I84V) in Complex with NR02-73
Descriptor:	(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl][(2S)-2-methylbutyl]amino}-1-phenylbutan-2-yl]carbamate, Protease, SULFATE ION
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-08-31
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.901 Å)
Cite:	HIV-1 Protease (I84V) in Complex with NR02-73 To Be Published

3ETA

Kinase domain of insulin receptor complexed with a pyrrolo pyridine inhibitor
Descriptor:	1-(3-{5-[4-(aminomethyl)phenyl]-1H-pyrrolo[2,3-b]pyridin-3-yl}phenyl)-3-(2-phenoxyphenyl)urea, insulin receptor, kinase domain
Authors:	Patnaik, S, Stevens, K, Gerding, R, Deanda, F, Shotwell, B, Tang, J, Hamajima, T, Nakamura, H, Leesnitzer, A, Hassell, A, Shewchuk, L, Kumar, R, Lei, H, Chamberlain, S.
Deposit date:	2008-10-07
Release date:	2009-05-26
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Discovery of 3,5-disubstituted-1H-pyrrolo[2,3-b]pyridines as potent inhibitors of the insulin-like growth factor-1 receptor (IGF-1R) tyrosine kinase. Bioorg.Med.Chem.Lett., 19, 2009

7M9T

HIV-1 Protease WT (NL4-3) in Complex with NR02-73
Descriptor:	(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl][(2S)-2-methylbutyl]amino}-1-phenylbutan-2-yl]carbamate, Protease, SULFATE ION
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-08-31
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	HIV-1 Protease WT (NL4-3) in Complex with NR02-73 To Be Published

7M9U

HIV-1 Protease WT (NL4-3) in Complex with NR02-79
Descriptor:	(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-4-{(2-ethylbutyl)[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl]amino}-3-hydroxy-1-phenylbutan-2-yl]carbamate, Protease, SULFATE ION
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-08-31
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.911 Å)
Cite:	HIV-1 Protease WT (NL4-3) in Complex with NR02-79 To Be Published

7M9S

HIV-1 Protease WT (NL4-3) in Complex with NR01-141
Descriptor:	(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-3-hydroxy-4-{[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]carbamate, Protease, SULFATE ION
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-08-31
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.961 Å)
Cite:	HIV-1 Protease WT (NL4-3) in Complex with NR01-141 To Be Published

7M9X

HIV-1 Protease (I84V) in Complex with NR02-79
Descriptor:	(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(2S,3R)-4-{(2-ethylbutyl)[(1S)-1-hydroxy-2,3-dihydro-1H-indene-5-sulfonyl]amino}-3-hydroxy-1-phenylbutan-2-yl]carbamate, Protease, SULFATE ION
Authors:	Lockbaum, G.J, Schiffer, C.A.
Deposit date:	2021-03-31
Release date:	2022-08-31
Last modified:	2023-10-18
Method:	X-RAY DIFFRACTION (1.831 Å)
Cite:	HIV-1 Protease (I84V) in Complex with NR02-79 To Be Published

<177 178 179 180 181 182 183184185 186 187 188 189 190 191 192 >

Total results:	245663
Displayed results:	25
Sorted by:	Hit score (from highest)
Query:	{{{1}}}