Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9NMN
DownloadVisualize
BU of 9nmn by Molmil
Structure of mouse RyR1 (Ca2+/CFF/ATP dataset; open pore)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, ...
Authors:Weninger, G, Marks, A.R.
Deposit date:2025-03-04
Release date:2025-10-08
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural basis for statin-induced skeletal muscle weakness
To Be Published
9QDI
DownloadVisualize
BU of 9qdi by Molmil
Crystal structure of BF3526 peptidase from Bacteroides fragilis in complex with a peptide
Descriptor: 1,2-ETHANEDIOL, 1,4-BUTANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Martinez Gascuena, A, Marquez-Monino, M.A, Manzanares-Gomez, A, Aguillo-Urarte, M, Trastoy, B.
Deposit date:2025-03-06
Release date:2025-07-16
Last modified:2025-09-10
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Molecular basis of Fab-dependent IgA antibody recognition by gut-bacterial metallopeptidases.
Embo J., 44, 2025
9OMX
DownloadVisualize
BU of 9omx by Molmil
Crystal structure of E. coli ApaH in complex with Up4U
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Bis(5'-nucleosyl)-tetraphosphatase [symmetrical], MAGNESIUM ION, ...
Authors:Nuthanakanti, A, Serganov, A.
Deposit date:2025-05-14
Release date:2025-09-03
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:ApaH decaps Np 4 N-capped RNAs in two alternative orientations.
Nat.Chem.Biol., 2025
6NE4
DownloadVisualize
BU of 6ne4 by Molmil
Designed repeat protein specifically in complex with Fz7CRD
Descriptor: 1,2-ETHANEDIOL, Designed repeat binding protein, Frizzled-7, ...
Authors:Miao, Y, Jude, K.M, Garcia, K.C.
Deposit date:2018-12-16
Release date:2019-05-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.648 Å)
Cite:Receptor subtype discrimination using extensive shape complementary designed interfaces.
Nat.Struct.Mol.Biol., 26, 2019
4X28
DownloadVisualize
BU of 4x28 by Molmil
Crystal structure of the ChsE4-ChsE5 complex from Mycobacterium tuberculosis
Descriptor: Acyl-CoA dehydrogenase, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
Authors:Guja, K.E, Yang, M, Sampson, N, Garcia-Diaz, M.
Deposit date:2014-11-26
Release date:2015-02-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Unraveling Cholesterol Catabolism in Mycobacterium tuberculosis: ChsE4-ChsE5 alpha 2 beta 2 Acyl-CoA Dehydrogenase Initiates beta-Oxidation of 3-Oxo-cholest-4-en-26-oyl CoA.
Acs Infect Dis., 1, 2015
8W7X
DownloadVisualize
BU of 8w7x by Molmil
SPS_Carbonic Anhydrases
Descriptor: 1,2-ETHANEDIOL, BICARBONATE ION, SPS_Carbon Anhydrase, ...
Authors:Chun, I.S, Kim, M.S.
Deposit date:2023-08-31
Release date:2024-09-04
Last modified:2025-09-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Developing a hybrid carbonic anhydrase with exceptional high temperature and alkaline environments resistance for efficient CO2 capture from air
J CO2 utilization, 86, 2024
8D7M
DownloadVisualize
BU of 8d7m by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
8D7O
DownloadVisualize
BU of 8d7o by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023
7RTP
DownloadVisualize
BU of 7rtp by Molmil
Structure of full-length human lambda-6A light chain JTO in complex with urea stabilizer 20 [1-(2-(7-(diethylamino)-4-methyl-2-oxo-2H-chromen-3-yl)ethyl)-3-(pyridin-3-ylmethyl)urea]
Descriptor: JTO light chain, N-{2-[7-(diethylamino)-4-methyl-2-oxo-2H-1-benzopyran-3-yl]ethyl}-N'-[(pyridin-3-yl)methyl]urea, PHOSPHATE ION
Authors:Yan, N.L, Wilson, I.A, Kelly, J.W.
Deposit date:2021-08-13
Release date:2022-02-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Amyloidogenic immunoglobulin light chain kinetic stabilizers comprising a simple urea linker module reveal a novel binding sub-site.
Bioorg.Med.Chem.Lett., 60, 2022
6YXG
DownloadVisualize
BU of 6yxg by Molmil
Cryogenic human adiponectin receptor 2 (ADIPOR2) with Tb-XO4 ligand determined by Serial Crystallography (SSX) using CrystalDirect
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Adiponectin receptor protein 2, OLEIC ACID, ...
Authors:Healey, R.D, Basu, S, Humm, A.S, Leyrat, C, Dupeux, F, Pica, A, Granier, S, Marquez, J.A.
Deposit date:2020-05-01
Release date:2021-05-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:An automated platform for structural analysis of membrane proteins through serial crystallography.
Cell Rep Methods, 1, 2021
6WAG
DownloadVisualize
BU of 6wag by Molmil
Crystal Structure of SmcR S76A from Vibrio Vulnificus
Descriptor: 1,2-ETHANEDIOL, LuxR family transcriptional regulator, SULFATE ION
Authors:Newman, J.D, Russell, M.M, Gonzalez-Gutierrez, G, van Kessel, J.C.
Deposit date:2020-03-25
Release date:2020-06-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.575 Å)
Cite:The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences.
Nucleic Acids Res., 49, 2021
5MFO
DownloadVisualize
BU of 5mfo by Molmil
Designed armadillo repeat protein YIIIM3AIII
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, YIIIM3AIII
Authors:Hansen, S, Ernst, P, Reichen, C, Ewald, C, Mittl, P, Plueckthun, A.
Deposit date:2016-11-18
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Curvature of designed armadillo repeat proteins allows modular peptide binding.
J. Struct. Biol., 201, 2018
9NTH
DownloadVisualize
BU of 9nth by Molmil
Helix pomatia AMP deaminase (HPAMPD) in complex with Pentostatin monophosphate (PMP)
Descriptor: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kaur, G, Horton, J.R, Cheng, X.
Deposit date:2025-03-18
Release date:2025-06-18
Last modified:2025-07-23
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural basis for the substrate specificity of Helix pomatia AMP deaminase and a chimeric ADGF adenosine deaminase.
J.Biol.Chem., 301, 2025
5YXG
DownloadVisualize
BU of 5yxg by Molmil
Crystal structure of C-terminal fragment of SpaD from Lactobacillus rhamnosus GG generated by limited proteolysis
Descriptor: CHLORIDE ION, Pilus assembly protein
Authors:Chaurasia, P, Pratap, S, Palva, A, von Ossowski, I, Krishnan, V.
Deposit date:2017-12-05
Release date:2018-06-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Bent conformation of a backbone pilin N-terminal domain supports a three-stage pilus assembly mechanism.
Commun Biol, 1, 2018
6MOF
DownloadVisualize
BU of 6mof by Molmil
Monomeric DARPin G2 complex with EpoR
Descriptor: 1,2-ETHANEDIOL, Erythropoietin receptor, G2 DARPin
Authors:Jude, K.M, Mohan, K, Garcia, K.C.
Deposit date:2018-10-04
Release date:2019-06-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.894 Å)
Cite:Topological control of cytokine receptor signaling induces differential effects in hematopoiesis.
Science, 364, 2019
8VRU
DownloadVisualize
BU of 8vru by Molmil
GII.4c apo norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein, FORMIC ACID
Authors:Kher, G, Prewitt, A, Pancera, M, Hansman, G.
Deposit date:2024-01-22
Release date:2024-06-19
Last modified:2025-01-01
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
6NIQ
DownloadVisualize
BU of 6niq by Molmil
Crystal Structure of the Putative Class A Beta-Lactamase PenP from Rhodopseudomonas palustris
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, CHLORIDE ION, ...
Authors:Kim, Y, Tesar, C, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-12-31
Release date:2019-01-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.353 Å)
Cite:Crystal Structure of the Putative Class A Beta-Lactamase PenP from Rhodopseudomonas palustris
To Be Published
8VU5
DownloadVisualize
BU of 8vu5 by Molmil
Cryo-EM structure of MPL bound to TPO
Descriptor: Thrombopoietin, Thrombopoietin receptor
Authors:Bratkowski, M, Hao, Q, Paddock, M.
Deposit date:2024-01-28
Release date:2024-09-11
Last modified:2025-08-20
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structural basis of MPL activation by thrombopoietin.
Blood Vessels, Thrombosis & Hemostasis, 1, 2024
6WAI
DownloadVisualize
BU of 6wai by Molmil
Crystal Structure of SmcR N142D from Vibrio vulnificus
Descriptor: 1,2-ETHANEDIOL, LuxR family transcriptional regulator, SULFATE ION
Authors:Newman, J.D, Russell, M.M, Gonzalez-Gutierrez, G, van Kessel, J.C.
Deposit date:2020-03-25
Release date:2020-06-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.583 Å)
Cite:The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences.
Nucleic Acids Res., 49, 2021
6WAH
DownloadVisualize
BU of 6wah by Molmil
Crystal Structure of SmcR L139R from Vibrio vulnificus
Descriptor: 1,2-ETHANEDIOL, LuxR family transcriptional regulator, SULFATE ION
Authors:Newman, J.D, Russell, M.M, Gonzalez-Gutierrez, G, van Kessel, J.C.
Deposit date:2020-03-25
Release date:2020-06-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences.
Nucleic Acids Res., 49, 2021
8DJK
DownloadVisualize
BU of 8djk by Molmil
HMGCR-UBIAD1 Complex State 2
Descriptor: 3-hydroxy-3-methylglutaryl-coenzyme A reductase, CHOLESTEROL HEMISUCCINATE, Digitonin, ...
Authors:Chen, H, Qi, X, Li, X.
Deposit date:2022-06-30
Release date:2022-08-03
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.33 Å)
Cite:Regulated degradation of HMG CoA reductase requires conformational changes in sterol-sensing domain.
Nat Commun, 13, 2022
4WXP
DownloadVisualize
BU of 4wxp by Molmil
X-ray crystal structure of NS3 Helicase from HCV with a bound fragment inhibitor at 2.08 A resolution
Descriptor: (1-methyl-1H-indol-3-yl)acetic acid, CHLORIDE ION, NS3-4 protease, ...
Authors:Davies, D.R.
Deposit date:2014-11-14
Release date:2015-12-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:crystal structure of NS3 Helicase from HCV with a bound fragment inhibitor
TO BE PUBLISHED
8UC2
DownloadVisualize
BU of 8uc2 by Molmil
Ethylene forming enzyme (EFE) R171A variant in complex with nickel and Benzoic acid
Descriptor: 1,2-ETHANEDIOL, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, BENZOIC ACID, ...
Authors:Chatterjee, S, Rankin, J.A, Hu, J, Hausinger, R.
Deposit date:2023-09-25
Release date:2023-10-04
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural, Spectroscopic, and Computational Insights from Canavanine-Bound and Two Catalytically Compromised Variants of the Ethylene-Forming Enzyme.
Biochemistry, 63, 2024
6YIO
DownloadVisualize
BU of 6yio by Molmil
CRYSTAL STRUCTURE OF FAB RG6292 IN COMPLEX WITH CD25 ECD
Descriptor: FAB FRAGMENT HEAVY CHAIN, FAB FRGAMENT LIGHT CHAIN, Interleukin-2 receptor subunit alpha
Authors:Benz, J, Koll, H, Leibrock, L.
Deposit date:2020-04-01
Release date:2020-11-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:CD25-T reg -depleting antibodies preserving IL-2 signaling on effector T cells enhance effector activation and antitumor immunity.
Nat Cancer, 1, 2020
8D7N
DownloadVisualize
BU of 8d7n by Molmil
Human Casein kinase 1 delta in complex with phosphorylated human PERIOD2 FASP peptide
Descriptor: Casein kinase I isoform delta, Period circadian protein homolog 2 peptide
Authors:Philpott, J.M, Freeberg, A.M, Tripathi, S.M, Partch, C.L.
Deposit date:2022-06-07
Release date:2023-05-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:PERIOD phosphorylation leads to feedback inhibition of CK1 activity to control circadian period.
Mol.Cell, 83, 2023

243083

數據於2025-10-15公開中

PDB statisticsPDBj update infoContact PDBjnumon