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5OD9
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BU of 5od9 by Molmil
Structure of the engineered metalloesterase MID1sc9
Descriptor: (2~{S})-2-phenylpropanoic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Studer, S, Mittl, P.R.E, Hilvert, D.
Deposit date:2017-07-05
Release date:2018-12-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Evolution of a highly active and enantiospecific metalloenzyme from short peptides.
Science, 362, 2018
5OP3
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BU of 5op3 by Molmil
Designed Ankyrin Repeat Protein (DARPin) NDNH-1 selected by directed evolution against Lysozyme
Descriptor: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Fischer, G, Hogan, B.J, Houlihan, G, Edmond, S, Huovinen, T.T.K, Hollfelder, F, Hyvonen, M.
Deposit date:2017-08-09
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.359 Å)
Cite:Designed Ankyrin Repeat Protein (DARPin) NDNH-1 selected by directed evolution against Lysozyme
To be published
7Y7P
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BU of 7y7p by Molmil
QDE-1 in complex with RNA template, RNA primer and AMPNPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Cui, R.X, Gan, J.H, Ma, J.B.
Deposit date:2022-06-22
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7Q
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BU of 7y7q by Molmil
QDE-1 in complex with RNA template, RNA primer and 3'-dGTP
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Cui, R.X, Gan, J.H, Ma, J.B.
Deposit date:2022-06-22
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7R
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BU of 7y7r by Molmil
QDE-1 in complex with DNA template, RNA primer and 3'-dGTP
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*GP*AP*AP*CP*TP*AP*CP*CP*GP*TP*CP*GP*GP*A)-3'), ...
Authors:Cui, R.X, Gan, J.H, Ma, J.B.
Deposit date:2022-06-22
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7S
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BU of 7y7s by Molmil
QDE-1 in complex with DNA template, RNA primer and AMPNPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Cui, R.X, Gan, J.H, Ma, J.B.
Deposit date:2022-06-22
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Y7T
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BU of 7y7t by Molmil
QDE-1 in complex with 12nt DNA template, ATP and 3'-dGTP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*AP*G*AP*GP*AP*CP*CP*TP*TP*TP*T)-3'), GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Cui, R.X, Gan, J.H, Ma, J.B.
Deposit date:2022-06-22
Release date:2022-09-28
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural insights into the dual activities of the two-barrel RNA polymerase QDE-1.
Nucleic Acids Res., 50, 2022
7Z7C
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BU of 7z7c by Molmil
Broadly neutralizing DARPin bnD.8 in complex with the HIV-1 envelope variable loop 3 peptide V3 (BF520)
Descriptor: 1,2-ETHANEDIOL, Broadly neutralizing DARPin bnD.8, Envelope glycoprotein gp160, ...
Authors:Mittl, P.R, Gloegl, M.
Deposit date:2022-03-15
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Trapping the HIV-1 V3 loop in a helical conformation enables broad neutralization.
Nat.Struct.Mol.Biol., 30, 2023
7ZBS
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BU of 7zbs by Molmil
Solution NMR structure of the HTH_8cm consensus miniprotein in 30% TFE at 278K
Descriptor: HTH_8cm
Authors:Socha, O, Jakubec, D.
Deposit date:2022-03-24
Release date:2022-04-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Consensus design of structured miniproteins using spectral analysis of domain residue interaction networks
To Be Published
7XM1
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BU of 7xm1 by Molmil
Cryo-EM structure of mTIP60-Ba (metal-ion induced TIP60 (K67E) complex with barium ions
Descriptor: BARIUM ION, TIP60 K67E mutant
Authors:Ohara, N, Kawakami, N, Arai, R, Adachi, N, Moriya, T, Kawasaki, M, Miyamoto, K.
Deposit date:2022-04-24
Release date:2023-01-04
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Reversible Assembly of an Artificial Protein Nanocage Using Alkaline Earth Metal Ions.
J.Am.Chem.Soc., 145, 2023
7ZYU
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BU of 7zyu by Molmil
HDAC6 ZnF domain inhibitor - DARPin (Designed Ankyrin repeat protein) F10
Descriptor: 1,2-ETHANEDIOL, Designed Ankyrin repeat protein F10, Histone deacetylase 6, ...
Authors:Wang, L, Kempf, G.
Deposit date:2022-05-25
Release date:2022-06-01
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Disrupting the HDAC6-ubiquitin interaction impairs infection by influenza and Zika virus and cellular stress pathways.
Cell Rep, 39, 2022
2VUX
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BU of 2vux by Molmil
Human ribonucleotide reductase, subunit M2 B
Descriptor: FE (III) ION, RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT M2 B
Authors:Welin, M, Moche, M, Andersson, J, Arrowsmith, C.H, Berglund, H, Busam, R.D, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Herman, M.D, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Nilsson, M.E, Nyman, T, Persson, C, Sagemark, J, Schueler, H, Svensson, L, Thorsell, A.G, Tresaugues, L, van Den Berg, S, Weigelt, J, Wikstrom, M, Nordlund, P, Structural Genomics Consortium (SGC)
Deposit date:2008-05-31
Release date:2008-07-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Human Ribonucleotide Reductase, Subunit M2 B
To be Published
5KWD
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BU of 5kwd by Molmil
Computationally Designed Symmetric Homotetramer
Descriptor: Ankyrin repeat-containing protein
Authors:Fallas, J.A, Sankaran, B, Zwart, P, Baker, D.
Deposit date:2016-07-17
Release date:2017-04-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Computational design of self-assembling cyclic protein homo-oligomers.
Nat Chem, 9, 2017
2W6Z
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BU of 2w6z by Molmil
Crystal structure of Biotin carboxylase from E. coli in complex with the 3-(3-Methyl-but-2-enyl)-3H-purin-6-ylamine fragment
Descriptor: 3-(3-methylbut-2-en-1-yl)-3H-purin-6-amine, BIOTIN CARBOXYLASE, CHLORIDE ION
Authors:Mochalkin, I, Miller, J.R.
Deposit date:2008-12-19
Release date:2009-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of Antibacterial Biotin Carboxylase Inhibitors by Virtual Screening and Fragment-Based Approaches.
Acs Chem.Biol., 4, 2009
2W6O
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BU of 2w6o by Molmil
Crystal structure of Biotin carboxylase from E. coli in complex with 4-Amino-7,7-dimethyl-7,8-dihydro-quinazolinone fragment
Descriptor: 4-amino-7,7-dimethyl-7,8-dihydroquinazolin-5(6H)-one, BIOTIN CARBOXYLASE, CHLORIDE ION
Authors:Mochalkin, I, Miller, J.R.
Deposit date:2008-12-18
Release date:2009-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of Antibacterial Biotin Carboxylase Inhibitors by Virtual Screening and Fragment-Based Approaches.
Acs Chem.Biol., 4, 2009
2W9J
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BU of 2w9j by Molmil
The crystal structure of SRP14 from the Schizosaccharomyces pombe signal recognition particle
Descriptor: SIGNAL RECOGNITION PARTICLE SUBUNIT SRP14
Authors:Brooks, M.A, Ravelli, R.B.G, McCarthy, A.A, Strub, K, Cusack, S.
Deposit date:2009-01-25
Release date:2009-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Srp14 from the Schizosaccharomyces Pombe Signal Recognition Particle.
Acta Crystallogr.,Sect.D, 65, 2009
5L0P
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BU of 5l0p by Molmil
Symmetry-based assembly of a two-dimensional protein lattice
Descriptor: Transcription factor ETV6, Ferric uptake regulation protein chimera
Authors:Faham, S.
Deposit date:2016-07-27
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Symmetry based assembly of a 2 dimensional protein lattice.
PLoS ONE, 12, 2017
5LE2
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BU of 5le2 by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DDD_D12_15_D12_15_D12
Descriptor: ACETATE ION, DDD_D12_15_D12_15_D12, THIOCYANATE ION
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
5LEC
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BU of 5lec by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DDD_D12_12_D12_12_D12
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DDD_D12_12_D12_12_D12
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.506 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
5LE9
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BU of 5le9 by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DD_Off7_09_3G124
Descriptor: ACETATE ION, DD_Off7_09_3G124
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
5LEE
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BU of 5lee by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DDD_D12_12_D12_12_D12
Descriptor: DDD_D12_12_D12_12_D12
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
5LE8
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BU of 5le8 by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DD_D12_15_D12
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DD_D12_15_D12, GLYCEROL, ...
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
5LW2
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BU of 5lw2 by Molmil
Crystal structure of DARPin 5m3_D12
Descriptor: ACETATE ION, DARPin_5m3_D12
Authors:Batyuk, A, Wu, Y, Plueckthun, A.
Deposit date:2016-09-15
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
5LE7
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BU of 5le7 by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DD_D12_13_D12
Descriptor: DD_D12_13_D12, SULFATE ION
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017
5LE3
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BU of 5le3 by Molmil
Crystal structure of DARPin-DARPin rigid fusion, variant DD_D12_09_D12
Descriptor: DD_D12_09_D12
Authors:Batyuk, A, Wu, Y, Mittl, P.R, Plueckthun, A.
Deposit date:2016-06-29
Release date:2017-08-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Rigidly connected multispecific artificial binders with adjustable geometries.
Sci Rep, 7, 2017

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數據於2024-07-24公開中

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