2NR2
| The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native states ensembles of proteins | Descriptor: | Ubiquitin | Authors: | Richter, B, Gsponer, J, Varnai, P, Salvatella, X, Vendruscolo, M. | Deposit date: | 2006-11-01 | Release date: | 2007-05-08 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native state ensembles of proteins J.Biomol.Nmr, 37, 2007
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2OJR
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2O6V
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2N7K
| Unveiling the structural determinants of KIAA0323 binding preference for NEDD8 | Descriptor: | NEDD8, Protein KHNYN | Authors: | Santonico, E, Nepravishta, R, Mattioni, A, Valentini, E, Mandaliti, W, Procopio, R, Iannuccelli, M, Castagnoli, L, Polo, S, Paci, M, Cesareni, G. | Deposit date: | 2015-09-14 | Release date: | 2016-09-14 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Unveiling the structural determinants of KIAA0323 binding preference for NEDD8 To be Published
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2OOB
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2PE9
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2MWS
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2PEA
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2NBD
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2NBU
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2NBE
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2L3Z
| Proton-Detected 4D DREAM Solid-State NMR Structure of Ubiquitin | Descriptor: | Ubiquitin | Authors: | Huber, M, Hiller, S, Schanda, P, Ernst, M, Bockmann, A, Verel, R, Meier, B.H. | Deposit date: | 2010-09-27 | Release date: | 2011-02-16 | Last modified: | 2024-05-01 | Method: | SOLID-STATE NMR | Cite: | A Proton-Detected 4D Solid-State NMR Experiment for Protein Structure Determination. Chemphyschem, 12, 2011
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2LD9
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2MI8
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2N2K
| Ensemble structure of the closed state of Lys63-linked diubiquitin in the absence of a ligand | Descriptor: | S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate, ubiquitin | Authors: | Liu, Z, Gong, Z, Tang, C. | Deposit date: | 2015-05-10 | Release date: | 2015-07-08 | Last modified: | 2015-09-23 | Method: | SOLUTION NMR | Cite: | Lys63-linked ubiquitin chain adopts multiple conformational states for specific target recognition. Elife, 4, 2015
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2MBO
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2MBQ
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2MJB
| Solution nmr structure of ubiquitin refined against dipolar couplings in 4 media | Descriptor: | Ubiquitin-60S ribosomal protein L40 | Authors: | Maltsev, A, Grishaev, A, Roche, J, Zasloff, M, Bax, A. | Deposit date: | 2014-01-02 | Release date: | 2014-03-26 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Improved cross validation of a static ubiquitin structure derived from high precision residual dipolar couplings measured in a drug-based liquid crystalline phase. J.Am.Chem.Soc., 136, 2014
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8CMR
| Linear specific OTU-type DUB SnOTU from the pathogen S. negenvensis in complex with linear di-ubiquitin | Descriptor: | OTU domain-containing protein, Polyubiquitin-B | Authors: | Uthoff, M, Hermanns, T, Boll, V, Hofmann, K, Baumann, U. | Deposit date: | 2023-02-21 | Release date: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.24 Å) | Cite: | Functional and structural diversity in deubiquitinases of the Chlamydia-like bacterium Simkania negevensis. Nat Commun, 14, 2023
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8T48
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4W9I
| pVHL:EloB:EloC in complex with (2S,4R)-1-((2S,4R)-1-acetyl-4-hydroxypyrrolidine-2-carbonyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 10) | Descriptor: | (4R)-1-acetyl-4-hydroxy-L-prolyl-(4R)-4-hydroxy-N-[4-(4-methyl-1,3-thiazol-5-yl)benzyl]-L-prolinamide, Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2, ... | Authors: | Gadd, M.S, Soares, P, Galdeano, C, van Molle, I, Ciulli, A. | Deposit date: | 2014-08-27 | Release date: | 2014-09-10 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Structure-Guided Design and Optimization of Small Molecules Targeting the Protein-Protein Interaction between the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase and the Hypoxia Inducible Factor (HIF) Alpha Subunit with in Vitro Nanomolar Affinities. J.Med.Chem., 57, 2014
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3TBL
| Structure of Mono-ubiquitinated PCNA: Implications for DNA Polymerase Switching and Okazaki Fragment Maturation | Descriptor: | Proliferating cell nuclear antigen, Ubiquitin | Authors: | Zhang, Z, Lee, M, Lee, E, Zhang, S. | Deposit date: | 2011-08-07 | Release date: | 2012-05-23 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.903 Å) | Cite: | Structure of monoubiquitinated PCNA: Implications for DNA polymerase switching and Okazaki fragment maturation. Cell Cycle, 11, 2012
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2QHO
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3L0W
| Structure of split monoubiquitinated PCNA with ubiquitin in position two | Descriptor: | Monoubiquitinated Proliferating cell nuclear antigen, Proliferating cell nuclear antigen | Authors: | Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T. | Deposit date: | 2009-12-10 | Release date: | 2010-03-23 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange. Nat.Struct.Mol.Biol., 17, 2010
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3L10
| Structure of split monoubiquitinated PCNA with ubiquitin in position one | Descriptor: | Monoubiquitinated Proliferating cell nuclear antigen, Proliferating cell nuclear antigen | Authors: | Freudenthal, B.D, Gakhar, L, Ramaswamy, S, Washington, M.T. | Deposit date: | 2009-12-10 | Release date: | 2010-03-23 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange. Nat.Struct.Mol.Biol., 17, 2010
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