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3P2A
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BU of 3p2a by Molmil
Crystal Structure of Thioredoxin 2 from Yersinia pestis
Descriptor: FORMIC ACID, Putative thioredoxin-like protein, ZINC ION
Authors:Kim, Y, Zhou, M, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-10-01
Release date:2010-10-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.195 Å)
Cite:Crystal Structure of Thioredoxin 2 from Yersinia pestis
TO BE PUBLISHED
4EL1
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BU of 4el1 by Molmil
Crystal structure of oxidized hPDI (abb'xa')
Descriptor: Protein disulfide-isomerase
Authors:Wang, C, Li, W, Ren, J, Ke, H, Gong, W, Feng, W, Wang, C.-C.
Deposit date:2012-04-10
Release date:2013-04-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.883 Å)
Cite:Structural insights into the redox-regulated dynamic conformations of human protein disulfide isomerase
Antioxid Redox Signal, 19, 2013
4EKZ
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BU of 4ekz by Molmil
Crystal structure of reduced hPDI (abb'xa')
Descriptor: Protein disulfide-isomerase
Authors:Wang, C, Li, W, Ren, J, Ke, H, Gong, W, Feng, W, Wang, C.-C.
Deposit date:2012-04-10
Release date:2013-04-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structural insights into the redox-regulated dynamic conformations of human protein disulfide isomerase
Antioxid Redox Signal, 19, 2013
5XF7
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BU of 5xf7 by Molmil
Crystal structure of human protein disulfide isomerase-like protein of the testis
Descriptor: Protein disulfide-isomerase-like protein of the testis
Authors:Li, H, Li, J, Liu, Y, Liang, H.
Deposit date:2017-04-08
Release date:2017-12-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.381 Å)
Cite:Crystal and solution structures of human protein-disulfide isomerase-like protein of the testis (PDILT) provide insight into its chaperone activity
J. Biol. Chem., 293, 2018
1OAZ
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BU of 1oaz by Molmil
IgE Fv SPE7 complexed with a recombinant thioredoxin
Descriptor: IMMUNOGLOBULIN E, THIOREDOXIN 1
Authors:James, L.C, Roversi, P, Tawfik, D.
Deposit date:2003-01-21
Release date:2004-01-15
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Antibody Multispecificity Mediated by Conformational Diversity
Science, 299, 2003
5XOC
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BU of 5xoc by Molmil
Crystal structure of human Smad3-FoxH1 complex
Descriptor: Mothers against decapentaplegic homolog 3, Thioredoxin 1,Forkhead box protein H1
Authors:Miyazono, K, Ito, T, Tanokura, M.
Deposit date:2017-05-27
Release date:2018-03-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Hydrophobic patches on SMAD2 and SMAD3 determine selective binding to cofactors
Sci Signal, 11, 2018
5XWM
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BU of 5xwm by Molmil
human ERp44 zinc-bound form
Descriptor: CHLORIDE ION, Endoplasmic reticulum resident protein 44, ZINC ION
Authors:Watanabe, S, Harayama, M, Inaba, K.
Deposit date:2017-06-30
Release date:2019-01-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Zinc regulates ERp44-dependent protein quality control in the early secretory pathway.
Nat Commun, 10, 2019
6P7E
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BU of 6p7e by Molmil
Structure of T7 DNA Polymerase Bound to a Primer/Template DNA and a Peptide that Mimics the C-terminal Tail of the Primase-Helicase
Descriptor: ASP-THR-ASP-PHE peptide, DNA (25-MER), DNA (5'-D(P*GP*GP*CP*AP*GP*GP*TP*GP*GP*TP*CP*TP*TP*GP*CP*CP*GP*GP*TP*GP*A)-3'), ...
Authors:Foster, B.M, Rosenberg, D, Salvo, H, Stephens, K.L, Bintz, B.J, Hammel, M, Ellenberger, T, Gainey, M.D, Wallen, J.R.
Deposit date:2019-06-05
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Combined Solution and Crystal Methods Reveal the Electrostatic Tethers That Provide a Flexible Platform for Replication Activities in the Bacteriophage T7 Replisome.
Biochemistry, 58, 2019
8AON
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BU of 8aon by Molmil
Oxidoreductase fragment of human QSOX1 in complex with a Fab fragment of a humanized anti-QSOX1 antibody
Descriptor: GLYCEROL, Heavy chain, Light chain, ...
Authors:Khmelnitsky, L, Fass, D.
Deposit date:2022-08-08
Release date:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reliable energy-based antibody humanization and stabilization
To Be Published
6ZYW
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BU of 6zyw by Molmil
Outer Dynein Arm-Shulin complex - overall structure (Tetrahymena thermophila)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Dynein heavy chain, ...
Authors:Mali, G.R, Abid Ali, F, Lau, C.K, Carter, A.P.
Deposit date:2020-08-03
Release date:2021-01-20
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (8.78 Å)
Cite:Shulin packages axonemal outer dynein arms for ciliary targeting.
Science, 371, 2021
7BVV
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BU of 7bvv by Molmil
Crystal structure of sulfonic peroxiredoxin Ahp1 in complex with thioredoxin Trx2
Descriptor: Peroxiredoxin AHP1, Thioredoxin-2
Authors:Lian, F.M, Jiang, Y.L, Yang, W, Yang, X.
Deposit date:2020-04-11
Release date:2020-07-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of sulfonic peroxiredoxin Ahp1 in complex with thioredoxin Trx2 mimics a conformational intermediate during the catalytic cycle.
Int.J.Biol.Macromol., 161, 2020
8B6F
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BU of 8b6f by Molmil
Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2022-09-27
Release date:2023-03-29
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
7ZSC
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BU of 7zsc by Molmil
Crystal structure of the heterodimeric human C-P4H-II with truncated alpha subunit (C-P4H-II delta281)
Descriptor: Prolyl 4-hydroxylase subunit alpha-2, Protein disulfide-isomerase, SULFATE ION
Authors:Lebedev, A, Koski, M.K, Wierenga, R.K, Murthy, A.V, Sulu, R.
Deposit date:2022-05-06
Release date:2022-11-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:Crystal structure of the collagen prolyl 4-hydroxylase (C-P4H) catalytic domain complexed with PDI: Toward a model of the C-P4H alpha 2 beta 2 tetramer.
J.Biol.Chem., 298, 2022
8BWY
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BU of 8bwy by Molmil
In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Calmodulin, ...
Authors:Zimmermann, N.E.L, Noga, A, Obbineni, J.M, Ishikawa, T.
Deposit date:2022-12-07
Release date:2023-05-10
Last modified:2023-06-28
Method:ELECTRON MICROSCOPY (38 Å)
Cite:ATP-induced conformational change of axonemal outer dynein arms revealed by cryo-electron tomography.
Embo J., 42, 2023
7BZK
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BU of 7bzk by Molmil
Crystal structure of ferredoxin: thioredoxin reductase and thioredoxin y1 complex
Descriptor: Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, IRON/SULFUR CLUSTER, ...
Authors:Kurisu, G, Juniar, L, Tanaka, H.
Deposit date:2020-04-28
Release date:2020-10-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5935 Å)
Cite:Structural basis for thioredoxin isoform-based fine-tuning of ferredoxin-thioredoxin reductase activity.
Protein Sci., 29, 2020
4IJ3
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BU of 4ij3 by Molmil
Oxidoreductase Fragment of Human QSOX1 in Complex with a FAB Fragment from an Anti- Human QSOX1 Antibody
Descriptor: Heavy chain of FAB fragment, Light chain of FAB fragment, PHOSPHATE ION, ...
Authors:Fass, D, Grossman, I.
Deposit date:2012-12-21
Release date:2013-11-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An Inhibitory Antibody Blocks the First Step in the Dithiol/Disulfide Relay Mechanism of the Enzyme QSOX1.
J.Mol.Biol., 425, 2013
6N7W
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BU of 6n7w by Molmil
Structure of bacteriophage T7 leading-strand DNA polymerase (D5A/E7A)/Trx in complex with a DNA fork and incoming dTTP (from multiple lead complexes)
Descriptor: DNA (25-MER), DNA (77-MER), DNA-directed DNA polymerase, ...
Authors:Gao, Y, Fox, T, Val, N, Yang, W.
Deposit date:2018-11-28
Release date:2019-03-06
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Structures and operating principles of the replisome.
Science, 363, 2019
5D8I
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BU of 5d8i by Molmil
Engineering the Species-Specificity of an Inhibitory Antibody Targeting a Modulator of Tumor Stroma
Descriptor: Sulfhydryl oxidase 1
Authors:Grossman, I, Fass, D.
Deposit date:2015-08-17
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Overcoming a species-specificity barrier in development of an inhibitory antibody targeting a modulator of tumor stroma.
Protein Eng.Des.Sel., 29, 2016
5D93
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BU of 5d93 by Molmil
Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from a Mouse QSOX1-Specific Antibody
Descriptor: Heavy Chain of Fab Fragment from a Mouse QSOX1-Specific Antibody, Light Chain of Fab Fragment from a Mouse QSOX1-Specific Antibody, Sulfhydryl oxidase 1
Authors:Grossman, I, Fass, D.
Deposit date:2015-08-18
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Overcoming a species-specificity barrier in development of an inhibitory antibody targeting a modulator of tumor stroma.
Protein Eng.Des.Sel., 29, 2016
5E4W
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BU of 5e4w by Molmil
Crystal structure of cpSRP43 chromodomains 2 and 3 in complex with the Alb3 tail
Descriptor: CALCIUM ION, GLYCEROL, Inner membrane protein ALBINO3, ...
Authors:Horn, A, Ahmed, Y.L, Wild, K, Sinning, I.
Deposit date:2015-10-07
Release date:2015-12-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction.
Nat Commun, 6, 2015
5D96
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BU of 5d96 by Molmil
Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from an Antibody Targeting Mouse and Human QSOX1
Descriptor: Heavy chain of Fab fragment from an antibody targeting mouse and human QSOX1, Light chain of Fab fragment from an antibody targeting mouse and human QSOX1, Sulfhydryl oxidase 1
Authors:Fass, D, Grossman, I.
Deposit date:2015-08-18
Release date:2016-02-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Overcoming a species-specificity barrier in development of an inhibitory antibody targeting a modulator of tumor stroma.
Protein Eng.Des.Sel., 29, 2016
5CRW
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BU of 5crw by Molmil
Crystal structure of the b'-a' domain of oxidized protein disulfide isomerase complexed with alpha-synuclein peptide (31-41)
Descriptor: Peptide from Alpha-synuclein, Protein disulfide-isomerase
Authors:Yagi-Utsumi, M, Satoh, T, Kato, K.
Deposit date:2015-07-23
Release date:2015-09-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of redox-dependent substrate binding of protein disulfide isomerase.
Sci Rep, 5, 2015
3APQ
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BU of 3apq by Molmil
Crystal structure of J-Trx1 fragment of ERdj5
Descriptor: DnaJ homolog subfamily C member 10
Authors:Inaba, K, Suzuki, M, Nagata, K.
Deposit date:2010-10-20
Release date:2011-04-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural basis of an ERAD pathway mediated by the ER-resident protein disulfide reductase ERdj5.
Mol.Cell, 41, 2011
3APO
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BU of 3apo by Molmil
Crystal structure of full-length ERdj5
Descriptor: DnaJ homolog subfamily C member 10
Authors:Inaba, K, Suzuki, M, Nagata, K.
Deposit date:2010-10-20
Release date:2011-04-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of an ERAD pathway mediated by the ER-resident protein disulfide reductase ERdj5.
Mol.Cell, 41, 2011
3BOA
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BU of 3boa by Molmil
Crystal structure of yeast protein disulfide isomerase.
Descriptor: Protein disulfide-isomerase
Authors:Tian, G, Lennarz, W.J, Schindelin, H.
Deposit date:2007-12-17
Release date:2008-09-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:The Catalytic Activity of Protein-disulfide Isomerase Requires a Conformationally Flexible Molecule.
J.Biol.Chem., 283, 2008

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數據於2024-06-12公開中

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