PDB: 374 resultsInfo pagesStatus searchChemie searchBIRD

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7WGE	Human NLRP1 complexed with thioredoxin Descriptor: MAGNESIUM ION, NACHT, LRR and PYD domains-containing protein 1, ... Authors: Zhang, Z, Ohto, U, Shimizu, T. Deposit date: 2021-12-28 Release date: 2023-07-05 Last modified: 2023-10-18 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Structural basis for thioredoxin-mediated suppression of NLRP1 inflammasome. Nature, 622, 2023
5D96	Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from an Antibody Targeting Mouse and Human QSOX1 Descriptor: Heavy chain of Fab fragment from an antibody targeting mouse and human QSOX1, Light chain of Fab fragment from an antibody targeting mouse and human QSOX1, Sulfhydryl oxidase 1 Authors: Fass, D, Grossman, I. Deposit date: 2015-08-18 Release date: 2016-02-10 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Overcoming a species-specificity barrier in development of an inhibitory antibody targeting a modulator of tumor stroma. Protein Eng.Des.Sel., 29, 2016
5D93	Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from a Mouse QSOX1-Specific Antibody Descriptor: Heavy Chain of Fab Fragment from a Mouse QSOX1-Specific Antibody, Light Chain of Fab Fragment from a Mouse QSOX1-Specific Antibody, Sulfhydryl oxidase 1 Authors: Grossman, I, Fass, D. Deposit date: 2015-08-18 Release date: 2016-02-10 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.201 Å) Cite: Overcoming a species-specificity barrier in development of an inhibitory antibody targeting a modulator of tumor stroma. Protein Eng.Des.Sel., 29, 2016
7YSI	Crystal structure of thioredoxin 2 Descriptor: Thiol disulfide reductase thioredoxin, ZINC ION Authors: Chang, Y.J, Park, H.H. Deposit date: 2022-08-12 Release date: 2023-03-15 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.202 Å) Cite: Comparison of the structure and activity of thioredoxin 2 and thioredoxin 1 from Acinetobacter baumannii. Iucrj, 10, 2023
4LL4	The structure of the TRX and TXNIP complex Descriptor: Thioredoxin, Thioredoxin-interacting protein Authors: Hwang, J, Kim, M.H. Deposit date: 2013-07-09 Release date: 2014-02-05 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.7 Å) Cite: The structural basis for the negative regulation of thioredoxin by thioredoxin-interacting protein Nat Commun, 5, 2014
7K58	Structure of outer-arm dyneins bound to microtubule with microtubule binding state 1(MTBS-1) Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Dynein heavy chain, ... Authors: Qinhui, R, Kai, Z. Deposit date: 2020-09-16 Release date: 2021-09-29 Last modified: 2021-10-20 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism. Nat.Struct.Mol.Biol., 28, 2021
7KEK	Structure of the free outer-arm dynein in pre-parallel state Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Dynein alpha heavy chain, ... Authors: Rao, Q, Zhang, K. Deposit date: 2020-10-11 Release date: 2021-09-29 Last modified: 2021-10-20 Method: ELECTRON MICROSCOPY (8 Å) Cite: Structures of outer-arm dynein array on microtubule doublet reveal a motor coordination mechanism. Nat.Struct.Mol.Biol., 28, 2021
4LL1	The structure of the TRX and TXNIP complex Descriptor: Thioredoxin, Thioredoxin-interacting protein Authors: Hwang, J, Kim, M.H. Deposit date: 2013-07-09 Release date: 2014-02-05 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2 Å) Cite: The structural basis for the negative regulation of thioredoxin by thioredoxin-interacting protein Nat Commun, 5, 2014
6P7E	Structure of T7 DNA Polymerase Bound to a Primer/Template DNA and a Peptide that Mimics the C-terminal Tail of the Primase-Helicase Descriptor: ASP-THR-ASP-PHE peptide, DNA (25-MER), DNA (5'-D(P*GP*GP*CP*AP*GP*GP*TP*GP*GP*TP*CP*TP*TP*GP*CP*CP*GP*GP*TP*GP*A)-3'), ... Authors: Foster, B.M, Rosenberg, D, Salvo, H, Stephens, K.L, Bintz, B.J, Hammel, M, Ellenberger, T, Gainey, M.D, Wallen, J.R. Deposit date: 2019-06-05 Release date: 2020-03-04 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (3.001 Å) Cite: Combined Solution and Crystal Methods Reveal the Electrostatic Tethers That Provide a Flexible Platform for Replication Activities in the Bacteriophage T7 Replisome. Biochemistry, 58, 2019
7SCE	Ternary complex of fixed-arm Trx-3ost5 (I299E) with 8mer-2 octasaccharide substrate and co-factor product PAP Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, Thioredoxin 1,Heparan sulfate glucosamine 3-O-sulfotransferase 5 Authors: Wander, R, Kaminski, A.M, Krahn, J.M, Liu, J, Pedersen, L.C. Deposit date: 2021-09-27 Release date: 2022-01-19 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Structural and Substrate Specificity Analysis of 3-O-Sulfotransferase Isoform 5 to Synthesize Heparan Sulfate Acs Catalysis, 11, 2021
7ZSC	Crystal structure of the heterodimeric human C-P4H-II with truncated alpha subunit (C-P4H-II delta281) Descriptor: Prolyl 4-hydroxylase subunit alpha-2, Protein disulfide-isomerase, SULFATE ION Authors: Lebedev, A, Koski, M.K, Wierenga, R.K, Murthy, A.V, Sulu, R. Deposit date: 2022-05-06 Release date: 2022-11-09 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (3.85 Å) Cite: Crystal structure of the collagen prolyl 4-hydroxylase (C-P4H) catalytic domain complexed with PDI: Toward a model of the C-P4H alpha 2 beta 2 tetramer. J.Biol.Chem., 298, 2022
7SCD	Ternary complex of fixed-arm Trx-3ost5 (I299E) with 8mer-1 octasaccharide substrate and co-factor product PAP Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid, ADENOSINE-3'-5'-DIPHOSPHATE, Thioredoxin 1,Heparan sulfate glucosamine 3-O-sulfotransferase 5 Authors: Wander, R, Kaminski, A.M, Krahn, J.M, Liu, J, Pedersen, L.C. Deposit date: 2021-09-27 Release date: 2022-01-19 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Structural and Substrate Specificity Analysis of 3-O-Sulfotransferase Isoform 5 to Synthesize Heparan Sulfate Acs Catalysis, 11, 2021
8AON	Oxidoreductase fragment of human QSOX1 in complex with a Fab fragment of a humanized anti-QSOX1 antibody Descriptor: GLYCEROL, Heavy chain, Light chain, ... Authors: Khmelnitsky, L, Fass, D. Deposit date: 2022-08-08 Release date: 2023-08-02 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Reliable energy-based antibody humanization and stabilization To Be Published
7C2B	Crystal structure of ferredoxin: thioredoxin reductase and thioredoxin f2 complex Descriptor: Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, Ferredoxin-thioredoxin reductase variable chain, ... Authors: Kurisu, G, Juniar, L, Tanaka, H. Deposit date: 2020-05-07 Release date: 2020-10-14 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.7949 Å) Cite: Structural basis for thioredoxin isoform-based fine-tuning of ferredoxin-thioredoxin reductase activity. Protein Sci., 29, 2020
7C3F	Crystal structure of ferredoxin: thioredoxin reductase and thioredoxin m2 complex Descriptor: Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, Ferredoxin-thioredoxin reductase variable chain, ... Authors: Kurisu, G, Juniar, L, Tanaka, H. Deposit date: 2020-05-12 Release date: 2020-10-14 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.3986 Å) Cite: Structural basis for thioredoxin isoform-based fine-tuning of ferredoxin-thioredoxin reductase activity. Protein Sci., 29, 2020
3HD5	Crystal structure of a thiol:disulfide interchange protein dsbA from Bordetella parapertussis Descriptor: Thiol:disulfide interchange protein dsbA Authors: Palani, K, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2009-05-06 Release date: 2009-05-19 Last modified: 2021-02-10 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystal structure of a thiol:disulfide interchange protein dsbA from Bordetella parapertussis To be Published
5AYL	Crystal structure of ERdj5 form II Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, DnaJ homolog subfamily C member 10 Authors: Watanabe, S, Maegawa, K, Inaba, K. Deposit date: 2015-08-22 Release date: 2017-02-15 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation To Be Published
6Y4Z	The crystal structure of human MACROD2 in space group P43212 Descriptor: L(+)-TARTARIC ACID, Thioredoxin 1,ADP-ribose glycohydrolase MACROD2 Authors: Wazir, S, Maksimainen, M.M, Lehtio, L. Deposit date: 2020-02-24 Release date: 2020-09-30 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Multiple crystal forms of human MacroD2. Acta Crystallogr.,Sect.F, 76, 2020
6Y4Y	The crystal structure of human MACROD2 in space group P41212 Descriptor: L(+)-TARTARIC ACID, Thioredoxin 1,ADP-ribose glycohydrolase MACROD2 Authors: Wazir, S, Maksimainen, M.M, Lehtio, L. Deposit date: 2020-02-24 Release date: 2020-09-30 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Multiple crystal forms of human MacroD2. Acta Crystallogr.,Sect.F, 76, 2020
8B6F	Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ... Authors: Muhleip, A, Kock Flygaard, R, Amunts, A. Deposit date: 2022-09-27 Release date: 2023-03-29 Last modified: 2023-04-12 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex. Nature, 615, 2023
6YEV	Crystal structure of MsrA C206 and Trx C35S complex from Escherichia coli Descriptor: Peptide methionine sulfoxide reductase MsrA, SODIUM ION, Thioredoxin 1 Authors: Napolitano, S, Zyla, D, Glockshuber, R. Deposit date: 2020-03-25 Release date: 2021-04-07 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.94 Å) Cite: Structure of a complex between the single-cysteine mutant MsrA C206 and Trx C35S from Escherichia coli To Be Published
8BWY	In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Calmodulin, ... Authors: Zimmermann, N.E.L, Noga, A, Obbineni, J.M, Ishikawa, T. Deposit date: 2022-12-07 Release date: 2023-05-10 Last modified: 2023-06-28 Method: ELECTRON MICROSCOPY (38 Å) Cite: ATP-induced conformational change of axonemal outer dynein arms revealed by cryo-electron tomography. Embo J., 42, 2023
5AYK	Crystal structure of ERdj5 form I Descriptor: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, CHLORIDE ION, DnaJ homolog subfamily C member 10 Authors: Watanabe, S, Maegawa, K, Inaba, K. Deposit date: 2015-08-22 Release date: 2017-02-15 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation To Be Published
1OAZ	IgE Fv SPE7 complexed with a recombinant thioredoxin Descriptor: IMMUNOGLOBULIN E, THIOREDOXIN 1 Authors: James, L.C, Roversi, P, Tawfik, D. Deposit date: 2003-01-21 Release date: 2004-01-15 Last modified: 2013-10-30 Method: X-RAY DIFFRACTION (2.78 Å) Cite: Antibody Multispecificity Mediated by Conformational Diversity Science, 299, 2003
5CRW	Crystal structure of the b'-a' domain of oxidized protein disulfide isomerase complexed with alpha-synuclein peptide (31-41) Descriptor: Peptide from Alpha-synuclein, Protein disulfide-isomerase Authors: Yagi-Utsumi, M, Satoh, T, Kato, K. Deposit date: 2015-07-23 Release date: 2015-09-09 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis of redox-dependent substrate binding of protein disulfide isomerase. Sci Rep, 5, 2015

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