PDB: 45415 resultsInfo pagesStatus searchChemie searchBIRD

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8VC4	Voltage gated potassium ion channel Kv1.2 in Sodium Descriptor: Potassium voltage-gated channel subfamily A member 2 Authors: Wu, Y, Sigworth, F.J. Deposit date: 2023-12-13 Release date: 2024-07-10 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.17 Å) Cite: Cryo-EM structures of Kv1.2 potassium channels, conducting and non-conducting. Biorxiv, 2024
8WCL	FCP pentamer in Chaetoceros gracilis Descriptor: (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, CHLOROPHYLL A, ... Authors: Feng, Y, Li, Z, Zhou, C, Liu, C, Shen, J.-R, Wang, W. Deposit date: 2023-09-12 Release date: 2024-07-31 Method: ELECTRON MICROSCOPY (2.65 Å) Cite: Structural and spectroscopic insights into fucoxanthin chlorophyll a/c-binding proteins of diatoms in diverse oligomeric states. Plant Commun., 2024
8XUR	BA.2.86 Spike Trimer in complex with heparan sulfate Descriptor: 2-O-sulfo-beta-L-altropyranuronic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Yue, C, Liu, P. Deposit date: 2024-01-14 Release date: 2024-07-03 Last modified: 2024-08-14 Method: ELECTRON MICROSCOPY (3.85 Å) Cite: Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity. Natl Sci Rev, 11, 2024
8X4H	SARS-CoV-2 JN.1 Spike Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Yue, C, Liu, P. Deposit date: 2023-11-15 Release date: 2024-07-03 Last modified: 2024-08-14 Method: ELECTRON MICROSCOPY (3.65 Å) Cite: Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity. Natl Sci Rev, 11, 2024
8X5Q	SARS-CoV-2 BA.2.75 Spike with K356T mutation (3 RBD down) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yue, C, Liu, P. Deposit date: 2023-11-17 Release date: 2024-07-03 Last modified: 2024-08-14 Method: ELECTRON MICROSCOPY (3.47 Å) Cite: Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity. Natl Sci Rev, 11, 2024
1DII	CRYSTAL STRUCTURE OF P-CRESOL METHYLHYDROXYLASE AT 2.5 A RESOLUTION Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, HEME C, ... Authors: Cunane, L.M, Chen, Z.W, Shamala, N, Mathews, F.S, Cronin, C.N, McIntire, W.S. Deposit date: 1999-11-29 Release date: 1999-12-08 Last modified: 2021-03-03 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structures of the flavocytochrome p-cresol methylhydroxylase and its enzyme-substrate complex: gated substrate entry and proton relays support the proposed catalytic mechanism. J.Mol.Biol., 295, 2000
8ORP	Crystal structure of Drosophila melanogaster alpha-amylase in complex with the inhibitor acarbose Descriptor: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4,6-dideoxy-4-{[(1S,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ... Authors: Aghajari, N, Haser, R. Deposit date: 2023-04-16 Release date: 2023-08-16 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural and Functional Characterization of Drosophila melanogaster alpha-Amylase. Molecules, 28, 2023
8OQ6	CryoEM structure of human rho1 GABAA receptor apo state Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, DECANE, ... Authors: Chen, F, Victor, T, John, C, Rebecca, J.H, Lindahl, E. Deposit date: 2023-04-11 Release date: 2023-08-30 Last modified: 2024-02-07 Method: ELECTRON MICROSCOPY (3.21 Å) Cite: Structure and dynamics of differential ligand binding in the human rho-type GABA A receptor. Neuron, 111, 2023
1DFU	CRYSTAL STRUCTURE OF E.COLI RIBOSOMAL PROTEIN L25 COMPLEXED WITH A 5S RRNA FRAGMENT AT 1.8 A RESOLUTION Descriptor: 5S RRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN L25 Authors: Lu, M, Steitz, T.A. Deposit date: 1999-11-21 Release date: 1999-12-02 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of Escherichia coli ribosomal protein L25 complexed with a 5S rRNA fragment at 1.8-A resolution. Proc.Natl.Acad.Sci.USA, 97, 2000
8OQ7	CryoEM structure of human rho1 GABAA receptor in complex with inhibitor TPMPA Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, DECANE, ... Authors: Chen, F, Victor, T, John, C, Rebecca, J.H, Lindahl, E. Deposit date: 2023-04-11 Release date: 2023-08-30 Last modified: 2024-02-07 Method: ELECTRON MICROSCOPY (2.2 Å) Cite: Structure and dynamics of differential ligand binding in the human rho-type GABA A receptor. Neuron, 111, 2023
8OQA	CryoEM structure of human rho1 GABAA receptor in complex with GABA and picrotoxin Descriptor: (1aR,2aR,3S,6R,6aS,8aS,8bR,9R)-2a-hydroxy-8b-methyl-9-(prop-1-en-2-yl)hexahydro-3,6-methano-1,5,7-trioxacyclopenta[ij]c yclopropa[a]azulene-4,8(3H)-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ... Authors: Chen, F, Victor, T, John, C, Rebecca, J.H, Lindahl, E. Deposit date: 2023-04-11 Release date: 2023-08-30 Last modified: 2024-02-07 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structure and dynamics of differential ligand binding in the human rho-type GABA A receptor. Neuron, 111, 2023
8OQ8	CryoEM structure of human rho1 GABAA receptor in complex with pore blocker picrotoxin Descriptor: (1aR,2aR,3S,6R,6aS,8aS,8bR,9R)-2a-hydroxy-8b-methyl-9-(prop-1-en-2-yl)hexahydro-3,6-methano-1,5,7-trioxacyclopenta[ij]c yclopropa[a]azulene-4,8(3H)-dione, 2-acetamido-2-deoxy-beta-D-glucopyranose, DECANE, ... Authors: Chen, F, Victor, T, John, C, Rebecca, J.H, Lindahl, E. Deposit date: 2023-04-11 Release date: 2023-08-30 Last modified: 2024-02-07 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structure and dynamics of differential ligand binding in the human rho-type GABA A receptor. Neuron, 111, 2023
7CZ9	Crystal structure of multidrug efflux transporter OqxB from Klebsiella pneumoniae Descriptor: DODECYL-BETA-D-MALTOSIDE, Efflux pump membrane transporter, GLYCEROL, ... Authors: Murakami, S, Okada, U, Yamashita, E. Deposit date: 2020-09-07 Release date: 2021-09-22 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structure and function relationship of OqxB efflux pump from Klebsiella pneumoniae. Nat Commun, 12, 2021
8OP9	CryoEM structure of human rho1 GABAA receptor in complex with GABA Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GAMMA-AMINO-BUTANOIC ACID, ... Authors: Chen, F, Victor, T, John, C, Rebecca, J.H, Lindahl, E. Deposit date: 2023-04-06 Release date: 2023-08-30 Last modified: 2024-02-07 Method: ELECTRON MICROSCOPY (3.36 Å) Cite: Structure and dynamics of differential ligand binding in the human rho-type GABA A receptor. Neuron, 111, 2023
8ONH	Variant Surface Glycoprotein VSG11wt-Oil Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Variant surface glycoprotein, alpha-D-glucopyranose, ... Authors: Zeelen, J.P, Stebbins, C.E, Foti, K, Gkeka, A, Vlachou, E.P. Deposit date: 2023-04-03 Release date: 2023-09-13 Method: X-RAY DIFFRACTION (2.59 Å) Cite: A structural classification of the variant surface glycoproteins of the African trypanosomey. Plos Negl Trop Dis, 17, 2023
7D75	X-ray structure of a domain-swapped dimer of Monellin with YEDKG loop-1 mutant Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, SULFATE ION, ... Authors: Manjula, R, Ramaswamy, S, Gosavi, S. Deposit date: 2020-10-03 Release date: 2021-10-06 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Domain swapped structure of Monellin Loop1-mutant To Be Published
7DL7	The wild-type structure of 3,5-DAHDHcca Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,5-diaminohexanoate dehydrogenase, ... Authors: Liu, N, Wu, L, Zhu, D.M, Zhou, J.H. Deposit date: 2020-11-26 Release date: 2021-09-29 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.30065823 Å) Cite: Crystal Structures and Catalytic Mechanism of l-erythro-3,5-Diaminohexanoate Dehydrogenase and Rational Engineering for Asymmetric Synthesis of beta-Amino Acids. Angew.Chem.Int.Ed.Engl., 60, 2021
7D4I	Cryo-EM structure of 90S small ribosomal precursors complex with the DEAH-box RNA helicase Dhr1 (State F) Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... Authors: Du, Y, Zhang, J, An, W, Ye, K. Deposit date: 2020-09-24 Release date: 2021-10-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (4 Å) Cite: Cryo-EM structure of 90S small ribosomal precursors complex with Dhr1 To Be Published
1DL2	CRYSTAL STRUCTURE OF CLASS I ALPHA-1,2-MANNOSIDASE FROM SACCHAROMYCES CEREVISIAE AT 1.54 ANGSTROM RESOLUTION Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CLASS I ALPHA-1,2-MANNOSIDASE, ... Authors: Vallee, F, Lipari, F, Yip, P, Herscovics, A, Howell, P.L. Deposit date: 1999-12-08 Release date: 2000-02-18 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Crystal structure of a class I alpha1,2-mannosidase involved in N-glycan processing and endoplasmic reticulum quality control. EMBO J., 19, 2000
7D6W	Crystal structure of Phycocyanin from Synechococcus sp. R42DM Descriptor: PHYCOCYANOBILIN, Phycocyanin alpha subunit, Phycocyanin beta subunit Authors: Patel, S.N, Sonani, R.R, Chaubey, M.G, Singh, N.K, Kumar, V, Madamwar, D. Deposit date: 2020-10-02 Release date: 2021-10-06 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystal structure of Synechococcus phycocyanin: implications of light-harvesting and antioxidant properties. 3 Biotech, 13, 2023
7D63	Cryo-EM structure of 90S preribosome with inactive Utp24 (state C) Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... Authors: Du, Y, Zhang, J, An, W, Ye, K. Deposit date: 2020-09-29 Release date: 2021-10-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (12.3 Å) Cite: Cryo-EM structure of 90S preribosome with inactive Utp24 (state C) To Be Published
7D5S	Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2) Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S12, ... Authors: Du, Y, Zhang, J, An, W, Ye, K. Deposit date: 2020-09-28 Release date: 2021-10-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (4.6 Å) Cite: Cryo-EM structure of 90S preribosome with inactive Utp24 (state A2) To Be Published
7D5T	Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1) Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... Authors: Du, Y, Zhang, J, An, W, Ye, K. Deposit date: 2020-09-28 Release date: 2021-10-06 Last modified: 2024-05-29 Method: ELECTRON MICROSCOPY (6 Å) Cite: Cryo-EM structure of 90S preribosome with inactive Utp24 (state F1) To Be Published
7DBK	Crystal structure of human LDHB in complex with NADH Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GLYCEROL, L-lactate dehydrogenase B chain Authors: Sogabe, S, Miwa, M. Deposit date: 2020-10-20 Release date: 2021-10-20 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.802 Å) Cite: Identification of the first highly selective inhibitor of human lactate dehydrogenase B. Sci Rep, 11, 2021
1WL6	Mg-substituted form of E. coli aminopeptidase P Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, CHLORIDE ION, ISOPROPYL ALCOHOL, ... Authors: Graham, S.C, Bond, C.S, Freeman, H.C, Guss, J.M. Deposit date: 2004-06-21 Release date: 2005-08-16 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural and functional implications of metal ion selection in aminopeptidase p, a metalloprotease with a dinuclear metal center Biochemistry, 44, 2005

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