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7QD3
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BU of 7qd3 by Molmil
Crystal structure of the C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with morpholine
Descriptor: Cholinephosphate cytidylyltransferase, morpholine
Authors:Duclovel, C, Gelin, M, Krimm, I, Cerdan, R, Guichou, J.-F.
Deposit date:2021-11-26
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystallographic screening using ultra-low-molecular-weight ligands to guide drug design of PfCCT inhibitors
To Be Published
8SKL
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BU of 8skl by Molmil
PTP1B in complex with 182
Descriptor: 1,2-ETHANEDIOL, 5-[1-fluoro-3-hydroxy-7-(3-hydroxy-3-methylbutoxy)naphthalen-2-yl]-1lambda~6~,2,5-thiadiazolidine-1,1,3-trione, CHLORIDE ION, ...
Authors:Babon, J.J, Chen, H, Tiganis, T.
Deposit date:2023-04-20
Release date:2023-08-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A small molecule inhibitor of PTP1B and PTPN2 enhances T cell anti-tumor immunity.
Nat Commun, 14, 2023
8SIU
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BU of 8siu by Molmil
Origin Recognition Complex Associated (ORCA) protein bound to Orc2
Descriptor: Leucine-rich repeat and WD repeat-containing protein 1, Origin recognition complex subunit 2, SULFATE ION
Authors:Bleichert, F, Ekundayo, B.E.
Deposit date:2023-04-17
Release date:2023-08-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A dual role for the chromatin reader ORCA/LRWD1 in targeting the origin recognition complex to chromatin.
Embo J., 42, 2023
7LSJ
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BU of 7lsj by Molmil
Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H63A, crystallized in the presence of Cu(II)
Descriptor: CALCIUM ION, COPPER (II) ION, HEME C, ...
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-18
Release date:2022-02-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Structure-guided metal selectivity in malleable protein interface mediated by single disulfide bond
To Be Published
7ZG2
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BU of 7zg2 by Molmil
BRD4 in complex with Acetyl-Lys
Descriptor: (2S)-2,6-diacetamido-N-methyl-hexanamide, Bromodomain-containing protein 4, GLYCEROL
Authors:Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M.
Deposit date:2022-04-01
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions.
J.Med.Chem., 65, 2022
6IRU
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BU of 6iru by Molmil
Crystal structure of Peptidase E from Deinococcus radiodurans in P6422 space group
Descriptor: peptidase DR_1070
Authors:Yadav, P, Chandravanshi, K, Kumar, A, Makde, R.D.
Deposit date:2018-11-14
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Catalytic triad heterogeneity in S51 peptidase family: Structural basis for functional variability.
Proteins, 87, 2019
7ZJ3
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BU of 7zj3 by Molmil
Structure of TRIM2 RING domain in complex with UBE2D1~Ub conjugate
Descriptor: Polyubiquitin-C, Tripartite motif-containing protein 2, Ubiquitin-conjugating enzyme E2 D1, ...
Authors:Esposito, D, Garza-Garcia, A, Dudley-Fraser, J, Rittinger, K.
Deposit date:2022-04-08
Release date:2022-11-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Divergent self-association properties of paralogous proteins TRIM2 and TRIM3 regulate their E3 ligase activity.
Nat Commun, 13, 2022
7QEL
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BU of 7qel by Molmil
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH011247
Descriptor: (2~{R})-~{N}-(4,5,6,7-tetrahydro-1,2-benzoxazol-3-yl)spiro[2.3]hexane-2-carboxamide, N-glycosylase/DNA lyase, NICKEL (II) ION
Authors:Davies, J.R, Scaletti, E.R, Stenmark, P.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH011247
To Be Published
7LRR
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BU of 7lrr by Molmil
Co-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Cu(II) (M1) and Co(II) (M2)
Descriptor: COBALT (II) ION, HEME C, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-17
Release date:2022-02-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
7ZVJ
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BU of 7zvj by Molmil
Homodimeric structure of LARGE1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Diskin, R, Katz, M.
Deposit date:2022-05-16
Release date:2022-11-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structural basis for matriglycan synthesis by the LARGE1 dual glycosyltransferase.
Plos One, 17, 2022
7LSL
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BU of 7lsl by Molmil
Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H63A, crystallized in the presence of Ni(II)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-18
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure-guided metal selectivity in malleable protein interface mediated by single disulfide bond
To Be Published
7A1X
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BU of 7a1x by Molmil
KRASG12C GDP form in complex with Cpd1
Descriptor: 3-(imidazol-1-ylmethyl)-1~{H}-indole, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Mathieu, M, Steier, V.
Deposit date:2020-08-14
Release date:2021-10-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:KRAS G12C fragment screening renders new binding pockets.
Small Gtpases, 13, 2022
7LRF
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BU of 7lrf by Molmil
Netrin-1 in complex with SOS
Descriptor: 1,2-ETHANEDIOL, 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Gupta, M, McDougall, M, Torres, A.M, Stetefeld, J.
Deposit date:2021-02-16
Release date:2022-02-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation.
Nat Commun, 14, 2023
7QDL
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BU of 7qdl by Molmil
N-TERMINAL BROMODOMAIN OF HUMAN BRD4 with I-BET567
Descriptor: (2S,4R)-1-acetyl-4-((5-chloropyrimidin-2-yl)amino)-2-methyl-1,2,3,4-tetrahydroquinoline-6-carboxamide, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
Authors:Chung, C.
Deposit date:2021-11-27
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Design, Synthesis, and Characterization of I-BET567, a Pan-Bromodomain and Extra Terminal (BET) Bromodomain Oral Candidate.
J.Med.Chem., 65, 2022
7A1W
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BU of 7a1w by Molmil
KRASG12C GDP form in complex with Cpd3
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, MAGNESIUM ION, ...
Authors:Mathieu, M, Steier, V.
Deposit date:2020-08-14
Release date:2021-10-13
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:KRAS G12C fragment screening renders new binding pockets.
Small Gtpases, 13, 2022
8SWJ
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BU of 8swj by Molmil
Co-crystal structure of 53BP1 tandem Tudor domains in complex with UNC8531
Descriptor: (3S)-N-(4'-carbamoyl[1,1'-biphenyl]-3-yl)-1-[4-(4-methylpiperazin-1-yl)pyridine-2-carbonyl]piperidine-3-carboxamide, TP53-binding protein 1, UNKNOWN ATOM OR ION
Authors:Zeng, H, Dong, A, Shell, D.J, Foley, C, Pearce, K.H, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2023-05-18
Release date:2023-08-02
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Co-crystal structure of 53BP1 tandem Tudor domains in complex with UNC8531
To be published
6IRY
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BU of 6iry by Molmil
Crystal structure of the zebrafish cap-specific adenosine methyltransferase bound to SAH
Descriptor: 1,2-ETHANEDIOL, PDX1 C-terminal-inhibiting factor 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Hirano, S, Nishimasu, H, Ishitani, R, Nureki, O.
Deposit date:2018-11-14
Release date:2018-12-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cap-specific terminal N 6 -methylation of RNA by an RNA polymerase II-associated methyltransferase.
Science, 363, 2019
7LRA
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BU of 7lra by Molmil
Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Cu(II) (M1) and Ni(II) (M2)
Descriptor: HEME C, NICKEL (II) ION, Soluble cytochrome b562
Authors:Choi, T.S, Tezcan, F.A.
Deposit date:2021-02-16
Release date:2022-02-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
7LI0
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BU of 7li0 by Molmil
Crystal structure of apo Moraxella catarrhalis ferric binding protein A in an open conformation
Descriptor: CARBONATE ION, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Chan, C, Ng, D, Fraser, M.E, Schryvers, A.B.
Deposit date:2021-01-26
Release date:2022-02-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and functional insights into iron acquisition from lactoferrin and transferrin in Gram-negative bacterial pathogens.
Biometals, 2022
7QEK
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BU of 7qek by Molmil
Structure of the ligand binding domain of the antibiotic biosynthesis regulator AdmX from the rhizobacterium Serratia plymuthica A153 bound to the auxin indole-3-piruvic acid (IPA).
Descriptor: 3-(1H-INDOL-3-YL)-2-OXOPROPANOIC ACID, MAGNESIUM ION, regulator AdmX
Authors:Gavira, J.A, Rico-Jimenez, M, Castellvi, A, Krell, T, Matilla, M.A.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria.
Mbio, 14, 2023
8SOV
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BU of 8sov by Molmil
Proteinase K Multiconformer Model at 353K
Descriptor: ALA-ALA-ALA-SER-VAL-LYS, CALCIUM ION, Proteinase K, ...
Authors:Du, S, Wankowicz, S, Yabukarski, F, Doukov, T, Herschlag, D, Fraser, J.S.
Deposit date:2023-04-30
Release date:2023-08-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.291 Å)
Cite:Refinement of multiconformer ensemble models from multi-temperature X-ray diffraction data.
Methods Enzymol., 688, 2023
6CCL
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BU of 6ccl by Molmil
Crystal structure of E.coli Phosphopantetheine Adenylyltransferase (PPAT/CoaD) in complex with 1-benzyl-1H-imidazo[4,5-b]pyridine
Descriptor: 1-benzyl-1H-imidazo[4,5-b]pyridine, DIMETHYL SULFOXIDE, Phosphopantetheine adenylyltransferase, ...
Authors:Mamo, M, Appleton, B.A.
Deposit date:2018-02-07
Release date:2018-03-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Fragment-Based Drug Discovery of Inhibitors of Phosphopantetheine Adenylyltransferase from Gram-Negative Bacteria.
J. Med. Chem., 61, 2018
7LFG
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BU of 7lfg by Molmil
X-ray radiation damage series on Thaumatin at 277K, crystal structure, dataset 1
Descriptor: L(+)-TARTARIC ACID, Thaumatin I
Authors:Yabukarski, F, Doukov, T, Herschlag, D.
Deposit date:2021-01-17
Release date:2022-02-23
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
7QF6
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BU of 7qf6 by Molmil
N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF
Descriptor: GLYCEROL, N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF, POTASSIUM ION, ...
Authors:Poonsiri, T, Demitri, N, Stefano, B.
Deposit date:2021-12-03
Release date:2022-12-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:N(5)-hydroxyornithine:cis-anhydromevalonyl coenzyme A-N(5)-transacylase sidF
To Be Published
6ISJ
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BU of 6isj by Molmil
Crystal structure of CX-4945 bound CK2 alpha from C. neoformans
Descriptor: 5-[(3-chlorophenyl)amino]benzo[c][2,6]naphthyridine-8-carboxylic acid, Casein kinase II subunit alpha, SULFATE ION
Authors:Cho, H.S.
Deposit date:2018-11-16
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of CX-4945 bound CK2 alpha from C. neoformans
To be published

227111

数据于2024-11-06公开中

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