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8PEL
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BU of 8pel by Molmil
Structure of C. thermophilum RNA exosome core
Descriptor: Exoribonuclease phosphorolytic domain-containing protein, Exoribonuclease-like protein, Exosome complex component MTR3, ...
Authors:Lazzaretti, D, Holdermann, I, Sprangers, R.
Deposit date:2023-06-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:Beyond static structures: quantitative dynamics in the eukaryotic RNA exosome complex
Biorxiv, 2024
8PEW
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BU of 8pew by Molmil
Rho-ATPgS-Psu complex II
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Polarity suppression protein, ...
Authors:Gjorgjevikj, D, Wahl, M.C, Hilal, T, Loll, B.
Deposit date:2023-06-15
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Rho-ATPgS-Psu complex II
To Be Published
3RGS
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BU of 3rgs by Molmil
Structural and kinetic analysis of the beef liver catalase with the ammonia as a ligand
Descriptor: AMMONIA, Catalase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Purwar, N, Schmidt, M.
Deposit date:2011-04-08
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Interaction of nitric oxide with catalase: structural and kinetic analysis.
Biochemistry, 50, 2011
3RGP
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BU of 3rgp by Molmil
Structural and Kinetic Analysis of the Beef liver Catalase complexed with Nitric Oxide
Descriptor: Catalase, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Purwar, N, Schmidt, M.
Deposit date:2011-04-08
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Interaction of nitric oxide with catalase: structural and kinetic analysis.
Biochemistry, 50, 2011
6RHQ
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BU of 6rhq by Molmil
Crystal Structure of Two-Domain Laccase mutant I170A from Streptomyces griseoflavus
Descriptor: COPPER (II) ION, GLYCEROL, SULFATE ION, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V, Kolyadenko, I.A.
Deposit date:2019-04-22
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase fromStreptomyces griseoflavusAc-993.
Int J Mol Sci, 20, 2019
6RI9
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BU of 6ri9 by Molmil
Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex in non-swiveled state
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Abdelkareem, M, Saint-Andre, C, Takacs, M, Papai, G, Crucifix, C, Guo, X, Ortiz, J, Weixlbaumer, A.
Deposit date:2019-04-23
Release date:2019-07-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural Basis of Transcription: RNA Polymerase Backtracking and Its Reactivation.
Mol.Cell, 75, 2019
3RI1
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BU of 3ri1 by Molmil
Crystal structure of the catalytic domain of FGFR2 kinase in complex with ARQ 069
Descriptor: (6S)-6-phenyl-5,6-dihydrobenzo[h]quinazolin-2-amine, Fibroblast growth factor receptor 2, SULFATE ION
Authors:Eathiraj, S, Palma, R, Hirschi, M, Volckova, E, Nakuci, E, Castro, J, Chen, C.R, Chan, T.C, France, D.S, Ashwell, M.A.
Deposit date:2011-04-12
Release date:2011-05-04
Last modified:2011-10-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A novel mode of protein kinase inhibition exploiting hydrophobic motifs of autoinhibited kinases: discovery of ATP-independent inhibitors of fibroblast growth factor receptor.
J.Biol.Chem., 286, 2011
3RMN
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BU of 3rmn by Molmil
Human Thrombin in complex with MI341
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hirudin variant-2, ...
Authors:Biela, A, Heine, A, Klebe, G.
Deposit date:2011-04-21
Release date:2012-04-25
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Ligand binding stepwise disrupts water network in thrombin: enthalpic and entropic changes reveal classical hydrophobic effect
J.Med.Chem., 55, 2012
6RO4
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BU of 6ro4 by Molmil
Structure of the core TFIIH-XPA-DNA complex
Descriptor: DNA repair protein complementing XP-A cells, DNA1, DNA2, ...
Authors:Kokic, G, Chernev, A, Tegunov, D, Dienemann, C, Urlaub, H, Cramer, P.
Deposit date:2019-05-10
Release date:2019-07-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of TFIIH activation for nucleotide excision repair.
Nat Commun, 10, 2019
8PEQ
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BU of 8peq by Molmil
Complex of diubiquitin-derived artificial binding protein (Affilin) variant Af2 with its target oncofetal fibronectin (fragment 7B8)
Descriptor: Affilin variant Af2, Fibronectin, SULFATE ION
Authors:Parthier, C, Katzschmann, A, Fiedler, E, Haupts, U, Reimann, A.
Deposit date:2023-06-14
Release date:2024-06-26
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Ubiquitin-derived artificial binding proteins targeting oncofetal fibronectin reveal scaffold plasticity by beta-strand slippage.
Commun Biol, 7, 2024
6S2F
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BU of 6s2f by Molmil
Cryo-EM structure of Ctf18-1-8 in complex with the catalytic domain of DNA polymerase epsilon (Class 2)
Descriptor: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ...
Authors:Grabarczyk, D.B, Song, B.
Deposit date:2019-06-20
Release date:2020-07-08
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Ctf18-RFC and DNA Pol ε form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication.
Nucleic Acids Res., 48, 2020
3T29
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BU of 3t29 by Molmil
TMAO-grown trigonal trypsin (bovine)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Cahn, J, Venkat, M, Marshall, H, Juers, D.
Deposit date:2011-07-22
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography.
Acta Crystallogr.,Sect.D, 68, 2012
3T2J
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BU of 3t2j by Molmil
Tetragonal thermolysin in the presence of betaine
Descriptor: CALCIUM ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Cahn, J, Hti Lar Seng, N.S, Juers, D.
Deposit date:2011-07-22
Release date:2011-12-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:The use of trimethylamine N-oxide as a primary precipitating agent and related methylamine osmolytes as cryoprotective agents for macromolecular crystallography.
Acta Crystallogr.,Sect.D, 68, 2012
3SZE
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BU of 3sze by Molmil
Crystal structure of the passenger domain of the E. coli autotransporter EspP
Descriptor: Serine protease espP
Authors:Khan, S, Mian, H.S, Sandercock, L.E, Battaile, K.P, Lam, R, Chirgadze, N.Y, Pai, E.F.
Deposit date:2011-07-18
Release date:2011-10-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Passenger Domain of the Escherichia coli Autotransporter EspP.
J.Mol.Biol., 413, 2011
6S16
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BU of 6s16 by Molmil
T. thermophilus RuvC in complex with Holliday junction substrate
Descriptor: CHLORIDE ION, Crossover junction endodeoxyribonuclease RuvC, DNA (33-MER), ...
Authors:Gorecka, K.M, Krepl, M, Szlachcic, A, Poznanski, J, Sponer, J, Nowotny, M.
Deposit date:2019-06-18
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.409 Å)
Cite:RuvC uses dynamic probing of the Holliday junction to achieve sequence specificity and efficient resolution.
Nat Commun, 10, 2019
3T1Y
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BU of 3t1y by Molmil
Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Murphy, F.V, Vendeix, F.A.P, Cantara, W, Leszczynska, G, Gustilo, E.M, Sproat, B, Malkiewicz, A.A.P, Agris, P.F.
Deposit date:2011-07-22
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Human tRNA(Lys3)(UUU) Is Pre-Structured by Natural Modifications for Cognate and Wobble Codon Binding through Keto-Enol Tautomerism.
J.Mol.Biol., 416, 2012
3T3R
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BU of 3t3r by Molmil
Human Cytochrome P450 2A6 in complex with Pilocarpine
Descriptor: (3S,4R)-3-ethyl-4-[(1-methyl-1H-imidazol-5-yl)methyl]dihydrofuran-2(3H)-one, Cytochrome P450 2A6, PROTOPORPHYRIN IX CONTAINING FE
Authors:DeVore, N.M, Scott, E.E.
Deposit date:2011-07-25
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural comparison of cytochromes P450 2A6, 2A13, and 2E1 with pilocarpine.
Febs J., 279, 2012
6S2E
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BU of 6s2e by Molmil
Cryo-EM structure of Ctf18-1-8 in complex with the catalytic domain of DNA polymerase epsilon
Descriptor: Chromosome transmission fidelity protein 18, Chromosome transmission fidelity protein 8, DNA polymerase epsilon catalytic subunit A, ...
Authors:Grabarczyk, D.B, Song, B.
Deposit date:2019-06-20
Release date:2020-07-08
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Ctf18-RFC and DNA Pol ε form a stable leading strand polymerase/clamp loader complex required for normal and perturbed DNA replication.
Nucleic Acids Res., 48, 2020
6RIP
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BU of 6rip by Molmil
Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex in swiveled state
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Abdelkareem, M, Saint-Andre, C, Takacs, M, Papai, G, Crucifix, C, Guo, X, Ortiz, J, Weixlbaumer, A.
Deposit date:2019-04-24
Release date:2019-07-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural Basis of Transcription: RNA Polymerase Backtracking and Its Reactivation.
Mol.Cell, 75, 2019
8PVQ
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BU of 8pvq by Molmil
Crystal Structure of Human PTX3 C-terminal domain
Descriptor: Pentraxin-related protein PTX3
Authors:Levy, C.W.
Deposit date:2023-07-18
Release date:2024-07-24
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Pentraxin 3 mediated crosslinking of heavy chain hyaluronan complexes: new insights from structural and biophysical studies
To Be Published
8PJL
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BU of 8pjl by Molmil
DNA duplex forming base triplets in minor groove
Descriptor: DNA (5'-D(*AP*AP*CP*TP*GP*AP*GP*AP*GP*AP*CP*GP*TP*A)-3'), DNA (5'-D(*TP*AP*CP*GP*TP*CP*TP*CP*TP*CP*AP*GP*TP*C)-3'), MAGNESIUM ION, ...
Authors:Abdullrahman, A, Cardin, C.J, Hall, J.P.
Deposit date:2023-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:DNA duplex with triplets bases in minor groove
To Be Published
8PIU
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BU of 8piu by Molmil
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex
Descriptor: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
Authors:Zdanowicz, R, Afanasyev, P, Boehringer, D, Glockshuber, R.
Deposit date:2023-06-22
Release date:2024-07-10
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Stoichiometry and architecture of the human pyruvate dehydrogenase complex.
Sci Adv, 10, 2024
6RFL
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BU of 6rfl by Molmil
Structure of the complete Vaccinia DNA-dependent RNA polymerase complex
Descriptor: DNA-dependent RNA polymerase subunit rpo132, DNA-dependent RNA polymerase subunit rpo147, DNA-dependent RNA polymerase subunit rpo18, ...
Authors:Grimm, C, Hillen, S.H, Bedenk, K, Bartuli, J, Neyer, S, Zhang, Q, Huettenhofer, A, Erlacher, M, Dienemann, C, Schlosser, A, Urlaub, H, Boettcher, B, Szalay, A.A, Cramer, P, Fischer, U.
Deposit date:2019-04-15
Release date:2019-12-11
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Structural Basis of Poxvirus Transcription: Vaccinia RNA Polymerase Complexes.
Cell, 179, 2019
6RVX
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BU of 6rvx by Molmil
Inward-open structure of the ASCT2 (SLC1A5) mutant C467R in presence of TBOA
Descriptor: Neutral amino acid transporter B(0)
Authors:Garaeva, A.A, Guskov, A, Slotboom, D.J, Paulino, C.
Deposit date:2019-06-03
Release date:2019-08-07
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.61 Å)
Cite:A one-gate elevator mechanism for the human neutral amino acid transporter ASCT2.
Nat Commun, 10, 2019
3SYX
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BU of 3syx by Molmil
Crystal Structure of the WH1 domain from human sprouty-related, EVH1 domain-containing protein. Northeast Structural Genomics Consortium Target HR5538B.
Descriptor: Sprouty-related, EVH1 domain-containing protein 1, YTTRIUM (III) ION
Authors:Vorobiev, S, Su, M, Seetharaman, J, Sahdev, S, Xiao, R, Ciccosanti, C, Shastry, R, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-07-18
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.453 Å)
Cite:Crystal Structure of the WH1 domain from human sprouty-related, EVH1 domain-containing protein.
To be Published

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数据于2024-10-16公开中

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