Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6HK1
DownloadVisualize
BU of 6hk1 by Molmil
Crystal structure of the Thiazole synthase from Methanothermococcus thermolithotrophicus co-crystallized with Tb-Xo4
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, SODIUM ION, ...
Authors:Engilberge, S, Wagner, T, Santoni, G, Breyton, C, Shima, S, Franzetti, B, Riobe, F, Maury, O, Girard, E.
Deposit date:2018-09-05
Release date:2019-06-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Protein crystal structure determination with the crystallophore, a nucleating and phasing agent.
J.Appl.Crystallogr., 52, 2019
6N9I
DownloadVisualize
BU of 6n9i by Molmil
Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus - free
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, COBALT (II) ION, ...
Authors:Bergonzi, C, Schwab, M, Elias, M.
Deposit date:2018-12-03
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Structural Determinants Accounting for the Broad Substrate Specificity of the Quorum Quenching Lactonase GcL.
Chembiochem, 20, 2019
6N9Q
DownloadVisualize
BU of 6n9q by Molmil
Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus bind to substrate C4-AHL
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, COBALT (II) ION, ...
Authors:Bergonzi, C, Schwab, M, Elias, M.
Deposit date:2018-12-03
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The Structural Determinants Accounting for the Broad Substrate Specificity of the Quorum Quenching Lactonase GcL.
Chembiochem, 20, 2019
6FRQ
DownloadVisualize
BU of 6frq by Molmil
Structure of tetragonal Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM Potassium sodium tartrate tetrahydrate.
Descriptor: CHLORIDE ION, Lysozyme C, TERBIUM(III) ION
Authors:Engilberge, S, Riobe, F, Di Pietro, S, Wagner, T, Shima, S, Girard, E, Dumont, E, Maury, O.
Deposit date:2018-02-16
Release date:2018-10-03
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
1ZD6
DownloadVisualize
BU of 1zd6 by Molmil
Crystal structure of human transthyretin with bound chloride
Descriptor: CHLORIDE ION, Transthyretin
Authors:Hornberg, A, Hultdin, U.W, Olofsson, A, Sauer-Eriksson, A.E.
Deposit date:2005-04-14
Release date:2005-07-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The effect of iodide and chloride on transthyretin structure and stability
Biochemistry, 44, 2005
7SN4
DownloadVisualize
BU of 7sn4 by Molmil
Cryo-EM structure of the enterohemorrhagic E. coli O157:H7 flagellar filament
Descriptor: Flagellin
Authors:Kreutzberger, M.A.B, Wang, F, Egelman, E.H.
Deposit date:2021-10-27
Release date:2022-03-16
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Flagellin outer domain dimerization modulates motility in pathogenic and soil bacteria from viscous environments.
Nat Commun, 13, 2022
1Y26
DownloadVisualize
BU of 1y26 by Molmil
A-riboswitch-adenine complex
Descriptor: ADENINE, MAGNESIUM ION, Vibrio vulnificus A-riboswitch
Authors:Serganov, A, Yuan, Y.R, Patel, D.J.
Deposit date:2004-11-20
Release date:2004-12-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for Discriminative Regulation of Gene Expression by Adenine- and Guanine-Sensing mRNAs
Chem.Biol., 11, 2004
6HXR
DownloadVisualize
BU of 6hxr by Molmil
Human PARP16 (ARTD15) IN COMPLEX WITH EB-47
Descriptor: 2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin-1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol-4-yl)ethanamide, Mono [ADP-ribose] polymerase PARP16
Authors:Karlberg, T, Pinto, A.F, Thorsell, A.G, Schuler, H.
Deposit date:2018-10-18
Release date:2019-10-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Human PARP16 (ARTD15) IN COMPLEX WITH EB-47
To Be Published
6HXS
DownloadVisualize
BU of 6hxs by Molmil
Human PARP16 (ARTD15) IN COMPLEX WITH CARBA-NAD
Descriptor: ADENOSINE, CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, GLYCEROL, ...
Authors:Karlberg, T, Pinto, A.F, Thorsell, A.G, Schuler, H.
Deposit date:2018-10-18
Release date:2019-10-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Human PARP16 (ARTD15) IN COMPLEX WITH CARBA-NAD
To Be Published
6FRO
DownloadVisualize
BU of 6fro by Molmil
Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM potassium iodide.
Descriptor: IODIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Engilberge, S, Riobe, F, Di Pietro, S, Girard, E, Dumont, E, Maury, O.
Deposit date:2018-02-16
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
1Z79
DownloadVisualize
BU of 1z79 by Molmil
Crystal structure of an RNA duplex containing site specific 2'-amine substitution at a C-A mismatch (at pH 5)
Descriptor: CALCIUM ION, RNA 5'-R(*GP*CP*AP*GP*AP*(A5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'
Authors:Gherghe, C.M, Krahn, J.M, Weeks, K.M.
Deposit date:2005-03-24
Release date:2005-10-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structures, reactivity and inferred acylation transition States for 2'-amine substituted RNA.
J.Am.Chem.Soc., 127, 2005
1YY0
DownloadVisualize
BU of 1yy0 by Molmil
Crystal structure of an RNA duplex containing a 2'-amine substitution and a 2'-amide product produced by in-crystal acylation at a C-A mismatch
Descriptor: 5'-R(*GP*CP*AP*GP*AP*(A5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3', 5'-R(*GP*CP*AP*GP*AP*(M5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3', CALCIUM ION
Authors:Gherghe, C.M, Krahn, J.M, Weeks, K.M.
Deposit date:2005-02-23
Release date:2005-10-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures, reactivity and inferred acylation transition States for 2'-amine substituted RNA.
J.Am.Chem.Soc., 127, 2005
6O0B
DownloadVisualize
BU of 6o0b by Molmil
Structural and Mechanistic Insights into CO2 Activation by Nitrogenase Iron Protein
Descriptor: IRON/SULFUR CLUSTER, Nitrogenase iron protein
Authors:Rettberg, L.A, Stiebritz, M.T, Kang, W, Lee, C.C, Ribbe, M.W, Hu, Y.
Deposit date:2019-02-15
Release date:2019-09-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Mechanistic Insights into CO2Activation by Nitrogenase Iron Protein.
Chemistry, 25, 2019
7S86
DownloadVisualize
BU of 7s86 by Molmil
Crystal structure of hydrophobin SC16, C2221
Descriptor: 1,2-ETHANEDIOL, Hydrophobin, SODIUM ION
Authors:Vergunst, K.L, Langelaan, D.N.
Deposit date:2021-09-17
Release date:2021-12-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:The N-terminal tail of the hydrophobin SC16 is not required for rodlet formation
Sci Rep, 12, 2022
6NWS
DownloadVisualize
BU of 6nws by Molmil
RORgamma Ligand Binding Domain
Descriptor: 2-chloro-6-fluoro-N-(1-{[3-(trifluoromethyl)phenyl]sulfonyl}-2,3-dihydro-1H-indol-6-yl)benzamide, Nuclear receptor ROR-gamma
Authors:Strutzenberg, T.S, Park, H.J, Griffin, P.R.
Deposit date:2019-02-07
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:HDX-MS reveals structural determinants for ROR gamma hyperactivation by synthetic agonists.
Elife, 8, 2019
7S7S
DownloadVisualize
BU of 7s7s by Molmil
Crystal structure of hydrophobin SC16, P21212
Descriptor: Hydrophobin
Authors:Vergunst, K.L, Langelaan, D.N.
Deposit date:2021-09-17
Release date:2022-01-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The N-terminal tail of the hydrophobin SC16 is not required for rodlet formation.
Sci Rep, 12, 2022
1YLS
DownloadVisualize
BU of 1yls by Molmil
Crystal structure of selenium-modified Diels-Alder ribozyme complexed with the product of the reaction between N-pentylmaleimide and covalently attached 9-hydroxymethylanthracene
Descriptor: (3AS,9AS)-2-PENTYL-4-HYDROXYMETHYL-3A,4,9,9A-TETRAHYDRO-4,9[1',2']-BENZENO-1H-BENZ[F]ISOINDOLE-1,3(2H)-DIONE, MAGNESIUM ION, RNA Diels-Alder ribozyme
Authors:Serganov, A, Keiper, S, Malinina, L, Tereshko, V, Skripkin, E, Hobartner, C, Polonskaia, A, Phan, A.T, Wombacher, R, Micura, R, Dauter, Z, Jaschke, A, Patel, D.J.
Deposit date:2005-01-19
Release date:2005-02-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for Diels-Alder ribozyme-catalyzed carbon-carbon bond formation.
Nat.Struct.Mol.Biol., 12, 2005
6N9R
DownloadVisualize
BU of 6n9r by Molmil
Structure of the Quorum Quenching lactonase from Parageobacillus caldoxylosilyticus bound to substrate 3-oxo-C12-AHL
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, COBALT (II) ION, ...
Authors:Bergonzi, C, Schwab, M, Elias, M.
Deposit date:2018-12-03
Release date:2019-04-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Structural Determinants Accounting for the Broad Substrate Specificity of the Quorum Quenching Lactonase GcL.
Chembiochem, 20, 2019
1Y27
DownloadVisualize
BU of 1y27 by Molmil
G-riboswitch-guanine complex
Descriptor: Bacillus subtilis xpt, GUANINE
Authors:Serganov, A, Yuan, Y.R, Patel, D.J.
Deposit date:2004-11-20
Release date:2004-12-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for Discriminative Regulation of Gene Expression by Adenine- and Guanine-Sensing mRNAs
Chem.Biol., 11, 2004
7BKW
DownloadVisualize
BU of 7bkw by Molmil
Endothiapepsin structure obtained at 100K with fragment BTB09871 bound
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Engilberge, S, Huang, C.-Y, Smith, K.M.L, Eris, D, Marsh, M, Wang, M, Wojdyla, J.A.
Deposit date:2021-01-17
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Endothiapepsin structure obtained at 100K with fragment BTB09871 bound
To Be Published
1Y1V
DownloadVisualize
BU of 1y1v by Molmil
Refined RNA Polymerase II-TFIIS complex
Descriptor: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, DNA-directed RNA polymerase II 19 kDa polypeptide, ...
Authors:Kettenberger, H, Armache, K.-J, Cramer, P.
Deposit date:2004-11-19
Release date:2004-12-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS.
Mol.Cell, 16, 2004
6NWU
DownloadVisualize
BU of 6nwu by Molmil
RORgamma Ligand Binding Domain
Descriptor: 6-[(3,5-dichloropyridin-4-yl)methoxy]-1-{[3-(trifluoromethyl)phenyl]sulfonyl}-2,3-dihydro-1H-indole, Nuclear receptor ROR-gamma
Authors:Strutzenberg, T.S, Park, H, Griffin, P.R.
Deposit date:2019-02-07
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:HDX-MS reveals structural determinants for ROR gamma hyperactivation by synthetic agonists.
Elife, 8, 2019
6NWT
DownloadVisualize
BU of 6nwt by Molmil
RORgamma Ligand Binding Domain
Descriptor: 1,1,1,3,3,3-hexafluoro-2-[2-fluoro-4'-({4-[(pyridin-4-yl)methyl]piperazin-1-yl}methyl)[1,1'-biphenyl]-4-yl]propan-2-ol, Nuclear receptor ROR-gamma
Authors:Strutzenberg, T.S, Park, H, Griffin, P.R.
Deposit date:2019-02-07
Release date:2019-07-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:HDX-MS reveals structural determinants for ROR gamma hyperactivation by synthetic agonists.
Elife, 8, 2019
1Y77
DownloadVisualize
BU of 1y77 by Molmil
Complete RNA Polymerase II elongation complex with substrate analogue GMPCPP
Descriptor: 5'-D(*AP*AP*GP*TP*AP*CP*T)-3', 5'-D(P*AP*GP*TP*AP*CP*TP*TP*AP*CP*T*CP*GP*CP*CP*TP*GP*GP*TP*CP*TP*G)-3', 5'-R(*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3', ...
Authors:Kettenberger, H, Armache, K.-J, Cramer, P.
Deposit date:2004-12-08
Release date:2005-01-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Complete RNA Polymerase II Elongation Complex Structure and Its Interactions with NTP and TFIIS
Mol.Cell, 16, 2004
1Z7F
DownloadVisualize
BU of 1z7f by Molmil
Crystal structure of 16 base pair RNA duplex containing a C-A mismatch
Descriptor: 5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3', STRONTIUM ION
Authors:Gherghe, C.M, Krahn, J.M, Weeks, K.M.
Deposit date:2005-03-24
Release date:2005-10-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures, reactivity and inferred acylation transition States for 2'-amine substituted RNA.
J.Am.Chem.Soc., 127, 2005

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon