Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8C0N
DownloadVisualize
BU of 8c0n by Molmil
Crystal structure of the red form of the mTagFT fluorescent timer
Descriptor: Blue-to-red TagFT fluorescent timer
Authors:Boyko, K.M, Nikolaeva, A.Y, Vlaskina, A.V, Agapova, Y.K, Subach, O.M, Popov, V.O, Subach, F.V.
Deposit date:2022-12-19
Release date:2023-03-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Blue-to-Red TagFT, mTagFT, mTsFT, and Green-to-FarRed mNeptusFT2 Proteins, Genetically Encoded True and Tandem Fluorescent Timers.
Int J Mol Sci, 24, 2023
8P2K
DownloadVisualize
BU of 8p2k by Molmil
Ternary complex of translating ribosome, NAC and METAP1
Descriptor: 18s rRNA, 28S rRNA, 40S ribosomal protein S11, ...
Authors:Jia, M, Jaskolowski, M, Scaiola, A, Jomaa, A, Ban, N.
Deposit date:2023-05-16
Release date:2023-07-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:NAC controls cotranslational N-terminal methionine excision in eukaryotes.
Science, 380, 2023
3QLU
DownloadVisualize
BU of 3qlu by Molmil
Crystal structure of the GluK2/GluK5 (GluR6/KA2) ATD dimer assembly
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Kumar, J, Mayer, M.L.
Deposit date:2011-02-03
Release date:2011-08-03
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.906 Å)
Cite:Structure and assembly mechanism for heteromeric kainate receptors.
Neuron, 71, 2011
5GJM
DownloadVisualize
BU of 5gjm by Molmil
Crystal structure of Lysine decarboxylase from Selenomonas ruminantium in C2 space group
Descriptor: GLYCEROL, Lysine/ornithine decarboxylase
Authors:Sagong, H.-Y, Kim, K.-J.
Deposit date:2016-07-01
Release date:2016-11-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal Structure and Pyridoxal 5-Phosphate Binding Property of Lysine Decarboxylase from Selenomonas ruminantium
PLoS ONE, 11, 2016
8F1C
DownloadVisualize
BU of 8f1c by Molmil
Voltage-gated potassium channel Kv3.1 with novel positive modulator (9M)-9-{5-chloro-6-[(3,3-dimethyl-2,3-dihydro-1-benzofuran-4-yl)oxy]-4-methylpyridin-3-yl}-2-methyl-7,9-dihydro-8H-purin-8-one (compound 4)
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (9M)-9-{5-chloro-6-[(3,3-dimethyl-2,3-dihydro-1-benzofuran-4-yl)oxy]-4-methylpyridin-3-yl}-2-methyl-7,9-dihydro-8H-purin-8-one, POTASSIUM ION, ...
Authors:Chen, Y, Ishchenko, A.
Deposit date:2022-11-04
Release date:2023-10-25
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Identification and structural and biophysical characterization of a positive modulator of human Kv3.1 channels.
Proc.Natl.Acad.Sci.USA, 120, 2023
8XB4
DownloadVisualize
BU of 8xb4 by Molmil
Structure of apo state of the human Norepinephrine Transporter
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GFP-MBP-solute carrier family 6 member 2
Authors:Wu, J.X, Ji, W.M.
Deposit date:2023-12-05
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Structural mechanism of substrate binding and inhibition of the human Norepinephrine Transporter
To Be Published
6F2G
DownloadVisualize
BU of 6f2g by Molmil
Bacterial asc transporter crystal structure in open to in conformation
Descriptor: Nanobody 74, Putative amino acid/polyamine transport protein, ZINC ION
Authors:Fort, J, Errasti-Murugarren, E, Carpena, X, Palacin, M, Fita, I.
Deposit date:2017-11-24
Release date:2019-04-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:L amino acid transporter structure and molecular bases for the asymmetry of substrate interaction.
Nat Commun, 10, 2019
7KTR
DownloadVisualize
BU of 7ktr by Molmil
Cryo-EM structure of the human SAGA coactivator complex (TRRAP, core)
Descriptor: Ataxin-7, INOSITOL HEXAKISPHOSPHATE, Isoform 3 of Transcription factor SPT20 homolog, ...
Authors:Herbst, D.A, Esbin, M.N, Nogales, E.
Deposit date:2020-11-24
Release date:2021-11-10
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structure of the human SAGA coactivator complex.
Nat.Struct.Mol.Biol., 28, 2021
8RXH
DownloadVisualize
BU of 8rxh by Molmil
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Descriptor: (2S)-2-[2-[4-[[(2R,3S,4S)-3-acetyloxy-4-oxidanyl-pyrrolidin-2-yl]methyl]phenoxy]ethanoylamino]-6-azanyl-hexanoic acid, 40S ribosomal protein S12, 40S ribosomal protein S14, ...
Authors:Rajan, K.S, Yonath, A.
Deposit date:2024-02-07
Release date:2024-05-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
7XJ1
DownloadVisualize
BU of 7xj1 by Molmil
Structure of human TRPV3_G573S in complex with Trpvicin in C2 symmetry
Descriptor: Fusion protein of Transient receptor potential cation channel subfamily V member 3 and 3C-GFP, N-[5-[2-(2-cyanopropan-2-yl)pyridin-4-yl]-4-(trifluoromethyl)-1,3-thiazol-2-yl]-4,6-dimethoxy-pyrimidine-5-carboxamide, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate
Authors:Fan, J, Yue, Z, Jiang, D, Lei, X.
Deposit date:2022-04-14
Release date:2022-11-09
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Structural basis of TRPV3 inhibition by an antagonist.
Nat.Chem.Biol., 19, 2023
8OOC
DownloadVisualize
BU of 8ooc by Molmil
CryoEM Structure INO80core Hexasome complex Rvb core refinement state1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Chromatin-remodeling ATPase Ino80, ...
Authors:Zhang, M, Jungblut, A, Hoffmann, T, Eustermann, S.
Deposit date:2023-04-05
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.93 Å)
Cite:Hexasome-INO80 complex reveals structural basis of noncanonical nucleosome remodeling.
Science, 381, 2023
4XBR
DownloadVisualize
BU of 4xbr by Molmil
In cellulo Crystal Structure of PAK4 in complex with Inka
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein FAM212A,Serine/threonine-protein kinase PAK 4
Authors:Baskaran, Y, Ang, K.C, Anekal, P.V, Chan, W.L, Grimes, J.M, Manser, E, Robinson, R.C.
Deposit date:2014-12-17
Release date:2015-12-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:An in cellulo-derived structure of PAK4 in complex with its inhibitor Inka1
Nat Commun, 6, 2015
7ZJD
DownloadVisualize
BU of 7zjd by Molmil
Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein
Descriptor: Transient receptor potential cation channel subfamily V member 2,Enhanced green fluorescent protein
Authors:Zhang, L, Gourdon, P, Zygmunt, P.M.
Deposit date:2022-04-10
Release date:2023-01-18
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Cannabinoid non-cannabidiol site modulation of TRPV2 structure and function.
Nat Commun, 13, 2022
8F1D
DownloadVisualize
BU of 8f1d by Molmil
Voltage-gated potassium channel Kv3.1 apo
Descriptor: CHOLESTEROL, POTASSIUM ION, Potassium voltage-gated channel subfamily C member 1, ...
Authors:Chen, Y, Ishchenko, A.
Deposit date:2022-11-04
Release date:2023-10-25
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Identification and structural and biophysical characterization of a positive modulator of human Kv3.1 channels.
Proc.Natl.Acad.Sci.USA, 120, 2023
8FVY
DownloadVisualize
BU of 8fvy by Molmil
40S subunit of the Giardia lamblia 80S ribosome
Descriptor: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S25, ...
Authors:Eiler, D.R, Wimberly, B.T, Bilodeau, D.Y, Rissland, O.S, Kieft, J.S.
Deposit date:2023-01-20
Release date:2024-01-24
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:The Giardia lamblia ribosome structure reveals divergence in several biological pathways and the mode of emetine function.
Structure, 32, 2024
8G61
DownloadVisualize
BU of 8g61 by Molmil
mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)
Descriptor: 1,4-DIAMINOBUTANE, 18S rRNA, 28S rRNA, ...
Authors:Holm, M, Natchiar, K.S, Rundlet, E.J, Myasnikov, A.G, Altman, R.B, Blanchard, S.C.
Deposit date:2023-02-14
Release date:2023-04-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:mRNA decoding in human is kinetically and structurally distinct from bacteria.
Nature, 617, 2023
5XV4
DownloadVisualize
BU of 5xv4 by Molmil
Crystal structure of ATG101-ATG13HORMA
Descriptor: Autophagy-related protein 101, Autophagy-related protein 13
Authors:Kim, B.-W, Song, H.K.
Deposit date:2017-06-26
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The C-terminal region of ATG101 bridges ULK1 and PtdIns3K complex in autophagy initiation.
Autophagy, 14, 2018
8PML
DownloadVisualize
BU of 8pml by Molmil
Structure of Nal1 protein , SPIKE allele from japonica rice, construct 46-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
7S7U
DownloadVisualize
BU of 7s7u by Molmil
Crystal structure of iNicSnFR3a Fluorescent Nicotine Sensor with nicotine bound
Descriptor: iNicSnFR 3.0 Fluorescent Nicotine Sensor
Authors:Fan, C, Shivange, A.V, Looger, L.L, Lester, H.A, Rees, D.C.
Deposit date:2021-09-17
Release date:2021-10-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Correction: Fluorescence activation mechanism and imaging of drug permeation with new sensors for smoking-cessation ligands.
Elife, 11, 2022
6SKF
DownloadVisualize
BU of 6skf by Molmil
Cryo-EM Structure of T. kodakarensis 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Matzov, D, Sas-Chen, A, Thomas, J.M, Santangelo, T, Meier, J.L, Schwartz, S, Shalev-Benami, M.
Deposit date:2019-08-15
Release date:2020-07-29
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
Nature, 583, 2020
4M48
DownloadVisualize
BU of 4m48 by Molmil
X-ray structure of dopamine transporter elucidates antidepressant mechanism
Descriptor: 9D5 antibody, heavy chain, light chain, ...
Authors:Gouaux, E, Penmatsa, A, Wang, K.
Deposit date:2013-08-06
Release date:2013-09-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.955 Å)
Cite:X-ray structure of dopamine transporter elucidates antidepressant mechanism.
Nature, 503, 2013
8RXX
DownloadVisualize
BU of 8rxx by Molmil
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : LM32Cs3H1 sKO STRAIN
Descriptor: 40S ribosomal protein S12, 40S ribosomal protein S14, 40S ribosomal protein S19-like protein, ...
Authors:Rajan, K.S, Yonath, A.
Deposit date:2024-02-08
Release date:2024-05-15
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structural and mechanistic insights into the function of Leishmania ribosome lacking a single pseudouridine modification.
Cell Rep, 43, 2024
8SLC
DownloadVisualize
BU of 8slc by Molmil
High Affinity nanobodies against GFP
Descriptor: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
Authors:Ketaren, N.E, Rout, M.P, Bonanno, J.B, Almo, S.C.
Deposit date:2023-04-21
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:High Affinity nanobodies against GFP
To Be Published
8PPK
DownloadVisualize
BU of 8ppk by Molmil
Bat-Hp-CoV Nsp1 and eIF1 bound to the human 40S small ribosomal subunit
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Schubert, K, Karousis, E.D, Ban, I, Lapointe, C.P, Leibundgut, M, Baeumlin, E, Kummerant, E, Scaiola, A, Schoenhut, T, Ziegelmueller, J, Puglisi, J.D, Muehlemann, O, Ban, N.
Deposit date:2023-07-07
Release date:2023-10-18
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Universal features of Nsp1-mediated translational shutdown by coronaviruses.
Mol.Cell, 83, 2023
8G4E
DownloadVisualize
BU of 8g4e by Molmil
Green Fluorescence Protein imaged on a cryo-EM imaging scaffold
Descriptor: RCG-10 - Cryo-EM imaging scaffold subunit B fused to DARPin, Superfolder Green Fluorescent Protein
Authors:Castells-Graells, R, Sawaya, M.R, Yeates, T.O.
Deposit date:2023-02-09
Release date:2023-08-09
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Cryo-EM structure determination of small therapeutic protein targets at 3 angstrom -resolution using a rigid imaging scaffold.
Proc.Natl.Acad.Sci.USA, 120, 2023

223532

数据于2024-08-07公开中

PDB statisticsPDBj update infoContact PDBjnumon