Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7YW3
DownloadVisualize
BU of 7yw3 by Molmil
Crystal structure of tRNA 2'-phosphotransferase from Homo sapiens
Descriptor: 1,2-ETHANEDIOL, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate, tRNA 2'-phosphotransferase 1
Authors:Yang, X.Y, Liu, X.H.
Deposit date:2022-08-21
Release date:2023-07-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and biochemical insights into the molecular mechanism of TRPT1 for nucleic acid ADP-ribosylation.
Nucleic Acids Res., 51, 2023
1SPI
DownloadVisualize
BU of 1spi by Molmil
CRYSTAL STRUCTURE OF SPINACH CHLOROPLAST FRUCTOSE-1,6-BISPHOSPHATASE AT 2.8 ANGSTROMS RESOLUTION
Descriptor: FRUCTOSE 1,6-BISPHOSPHATASE
Authors:Villeret, V, Huang, S, Zhang, Y, Xue, Y, Lipscomb, W.N.
Deposit date:1994-12-14
Release date:1995-02-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of spinach chloroplast fructose-1,6-bisphosphatase at 2.8 A resolution.
Biochemistry, 34, 1995
7YW4
DownloadVisualize
BU of 7yw4 by Molmil
Crystal structure of tRNA 2'-phosphotransferase from Saccharomyces cerevisiae
Descriptor: D(-)-TARTARIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, tRNA 2'-phosphotransferase
Authors:Yang, X.Y, Liu, X.H.
Deposit date:2022-08-21
Release date:2023-07-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural and biochemical insights into the molecular mechanism of TRPT1 for nucleic acid ADP-ribosylation.
Nucleic Acids Res., 51, 2023
7YNM
DownloadVisualize
BU of 7ynm by Molmil
ThT-bound alpha-synuclein fibrils conformation 1
Descriptor: 2-[4-(dimethylamino)phenyl]-3,6-dimethyl-1,3-benzothiazol-3-ium, Alpha-synuclein
Authors:Tao, Y.Q, Zhao, Q.Y, Liu, C, Li, D.
Deposit date:2022-07-31
Release date:2023-08-02
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:ThT-bound alpha-synuclein fibrils conformation 1
To Be Published
1S6P
DownloadVisualize
BU of 1s6p by Molmil
CRYSTAL STRUCTURE OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R100943
Descriptor: 1-(4-CYANO-PHENYL)-3-[2-(2,6-DICHLORO-PHENYL)-1-IMINO-ETHYL]-THIOUREA, MAGNESIUM ION, POL polyprotein [Contains: Reverse transcriptase]
Authors:Das, K, Arnold, E.
Deposit date:2004-01-26
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants
J.Med.Chem., 47, 2004
6PWJ
DownloadVisualize
BU of 6pwj by Molmil
Vibrio cholerae LapD S helix-GGDEF-EAL (apo)
Descriptor: GGDEF and EAL domain-containing protein, MAGNESIUM ION, TRIETHYLENE GLYCOL
Authors:Giglio, K.M, Cooley, R.B, Sondermann, H.
Deposit date:2019-07-23
Release date:2019-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Conserved Regulatory Circuit Controls Large Adhesins in Vibrio cholerae.
Mbio, 10, 2019
7ZRP
DownloadVisualize
BU of 7zrp by Molmil
2.65 Angstrom crystal structure of Ca/CaM:CaMKIIdelta peptide complex
Descriptor: CALCIUM ION, Calcium/calmodulin-dependent protein kinase type II subunit delta, Calmodulin-1, ...
Authors:Helassa, N, Antonyuk, S.
Deposit date:2022-05-04
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Calmodulin variant E140G associated with long QT syndrome impairs CaMKII delta autophosphorylation and L-type calcium channel inactivation.
J.Biol.Chem., 299, 2022
7YKR
DownloadVisualize
BU of 7ykr by Molmil
Structure of TRPA1 in Drosophila melanogaster in a state with 17 ankyrin repeats determined
Descriptor: Transient receptor potential cation channel subfamily A member 1
Authors:Sun, L, Liu, X, Yang, Z, Wang, X.
Deposit date:2022-07-23
Release date:2023-07-26
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular architecture and gating mechanisms of the Drosophila TRPA1 channel.
Cell Discov, 9, 2023
1SAF
DownloadVisualize
BU of 1saf by Molmil
HIGH RESOLUTION SOLUTION NMR STRUCTURE OF THE OLIGOMERIZATION DOMAIN OF P53 BY MULTI-DIMENSIONAL NMR (SAD STRUCTURES)
Descriptor: TUMOR SUPPRESSOR P53
Authors:Clore, G.M, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1995-03-12
Release date:1995-10-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Refined solution structure of the oligomerization domain of the tumour suppressor p53.
Nat.Struct.Biol., 2, 1995
1S7R
DownloadVisualize
BU of 1s7r by Molmil
Crystal structures of the murine class I major histocompatibility complex H-2Kb in complex with LCMV-derived gp33 index peptide and three of its escape variants
Descriptor: Beta-2-microglobulin, Glycoprotein 9-residue peptide, H-2 class I histocompatibility antigen, ...
Authors:Velloso, L.M, Michaelsson, J, Ljunggren, H.G, Schneider, G, Achour, A.
Deposit date:2004-01-30
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Determination of structural principles underlying three different modes of lymphocytic choriomeningitis virus escape from CTL recognition.
J.Immunol., 172, 2004
7YNQ
DownloadVisualize
BU of 7ynq by Molmil
PiB-bound alpha-synuclein fibrils conformation 2
Descriptor: 2-[4-(methylamino)phenyl]-1,3-benzothiazol-6-ol, Alpha-synuclein
Authors:Tao, Y.Q, Zhao, Q.Y, Liu, C, Li, D.
Deposit date:2022-07-31
Release date:2023-08-02
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:PiB-bound alpha-synuclein fibrils conformation 2
To Be Published
3D69
DownloadVisualize
BU of 3d69 by Molmil
Crystal Structure of the Fab Fragment of an Anti-Factor IX Antibody 10C12
Descriptor: anti-factor IX antibody, 10C12
Authors:Shi, X.L, Huang, M.D, Zeng, T.
Deposit date:2008-05-19
Release date:2009-03-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:Crystal structure of Fab Fragment of an anti-Factor IX antibody 10C12
CHIN.J.STRUCT.CHEM., 27, 2008
1S85
DownloadVisualize
BU of 1s85 by Molmil
PORCINE TRYPSIN COMPLEXED WITH P-HYDROXYMETHYL BENZAMIDINE AND BORATE
Descriptor: CALCIUM ION, SULFATE ION, TRYPSIN, ...
Authors:Transue, T.R, Krahn, J.M, Gabel, S.A, Derose, E.F, London, R.E.
Deposit date:2004-01-30
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Biochemistry, 43, 2004
7ZRQ
DownloadVisualize
BU of 7zrq by Molmil
1.68 Angstrom crystal structure of Ca/CaM-E140G:CaMKIIdelta peptide complex
Descriptor: CALCIUM ION, Calcium/calmodulin-dependent protein kinase type II subunit delta, Calmodulin-1, ...
Authors:Helassa, N, Antonyuk, S.
Deposit date:2022-05-04
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Calmodulin variant E140G associated with long QT syndrome impairs CaMKII delta autophosphorylation and L-type calcium channel inactivation.
J.Biol.Chem., 299, 2022
3VBZ
DownloadVisualize
BU of 3vbz by Molmil
Crystal structure of Taipoxin beta subunit isoform 2
Descriptor: Phospholipase A2 homolog, taipoxin beta chain
Authors:Cendron, L, Micetic, I, Polverino, P, Beltramini, M, Paoli, M.
Deposit date:2012-01-03
Release date:2012-07-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural analysis of trimeric phospholipase A(2) neurotoxin from the Australian taipan snake venom.
Febs J., 279, 2012
8S0P
DownloadVisualize
BU of 8s0p by Molmil
A fragment-based inhibitor of SHP2
Descriptor: 1-[3-[2,3-bis(chloranyl)phenyl]-1H-pyrrolo[3,2-b]pyridin-6-yl]-4-methyl-piperidin-4-amine, Tyrosine-protein phosphatase non-receptor type 11
Authors:Cleasby, A, Price, A.
Deposit date:2024-02-14
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024
3D7E
DownloadVisualize
BU of 3d7e by Molmil
Enterococcus casseliflavus glycerol kinase mutant HIS232ALA complexed with glycerol
Descriptor: GLYCEROL, Glycerol kinase
Authors:Yeh, J.I, Vahedi-Faridi, A.
Deposit date:2008-05-21
Release date:2009-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation
Biochemistry, 48, 2009
1S3N
DownloadVisualize
BU of 1s3n by Molmil
Structural and Functional Characterization of a Novel Archaeal Phosphodiesterase
Descriptor: Hypothetical protein MJ0936, MANGANESE (II) ION
Authors:Chen, S, Busso, D, Yakunin, A.F, Kuznetsova, E, Proudfoot, M, Jancrick, J, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-01-13
Release date:2004-08-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional characterization of a novel phosphodiesterase from Methanococcus jannaschii
J.Biol.Chem., 279, 2004
1JUH
DownloadVisualize
BU of 1juh by Molmil
Crystal Structure of Quercetin 2,3-dioxygenase
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Fusetti, F, Schroeter, K.H, Steiner, R.A, Dijkstra, B.W.
Deposit date:2001-08-24
Release date:2002-05-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the copper-containing quercetin 2,3-dioxygenase from Aspergillus japonicus.
Structure, 10, 2002
7YNR
DownloadVisualize
BU of 7ynr by Molmil
C05-03-bound alpha-synuclein fibrils
Descriptor: Alpha-synuclein
Authors:Tao, Y.Q, Zhao, Q.Y, Liu, C, Li, D.
Deposit date:2022-07-31
Release date:2023-08-02
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:C05-03-bound alpha-synuclein fibrils
To Be Published
3CLX
DownloadVisualize
BU of 3clx by Molmil
Crystal structure of XIAP BIR3 domain in complex with a Smac-mimetic compound, Smac005
Descriptor: (3S,6S,7S,9aS)-6-{[(2S)-2-aminobutanoyl]amino}-N-(diphenylmethyl)-7-(hydroxymethyl)-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide, Baculoviral IAP repeat-containing protein 4, ZINC ION
Authors:Milani, M, Mastrangelo, E, Cossu, F.
Deposit date:2008-03-20
Release date:2008-10-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Targeting the X-linked inhibitor of apoptosis protein through 4-substituted azabicyclo[5.3.0]alkane smac mimetics. Structure, activity, and recognition principles.
J.Mol.Biol., 384, 2008
6Q14
DownloadVisualize
BU of 6q14 by Molmil
Structure of the Salmonella SPI-1 injectisome NC-base
Descriptor: Lipoprotein PrgK, Protein InvG, Protein PrgH, ...
Authors:Hu, J, Worrall, L.J, Strynadka, N.C.J.
Deposit date:2019-08-02
Release date:2019-10-23
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:T3S injectisome needle complex structures in four distinct states reveal the basis of membrane coupling and assembly.
Nat Microbiol, 4, 2019
3CJ4
DownloadVisualize
BU of 3cj4 by Molmil
Crystal structure of hepatitis c virus rna-dependent rna polymerase ns5b in complex with optimized small molecule fragments
Descriptor: 4-[(4-bromo-2-{[(3R,5S)-3,5-dimethylpiperidin-1-yl]carbonyl}phenyl)amino]-4-oxobutanoic acid, NICKEL (II) ION, RNA-directed RNA polymerase
Authors:Antonysamy, s.s.
Deposit date:2008-03-12
Release date:2008-04-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Fragment-based discovery of hepatitis C virus NS5b RNA polymerase inhibitors.
Bioorg.Med.Chem.Lett., 18, 2008
1TCA
DownloadVisualize
BU of 1tca by Molmil
THE SEQUENCE, CRYSTAL STRUCTURE DETERMINATION AND REFINEMENT OF TWO CRYSTAL FORMS OF LIPASE B FROM CANDIDA ANTARCTICA
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE
Authors:Uppenberg, J, Jones, T.A.
Deposit date:1994-02-28
Release date:1994-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The sequence, crystal structure determination and refinement of two crystal forms of lipase B from Candida antarctica.
Structure, 2, 1994
8S0O
DownloadVisualize
BU of 8s0o by Molmil
A fragment-based inhibitor of SHP2
Descriptor: 3-[4-chloranyl-2-(1H-pyrazol-4-ylmethyl)indazol-5-yl]-5-methyl-6-(piperazin-1-ylmethyl)-1H-pyrrolo[3,2-b]pyridine, FORMIC ACID, Tyrosine-protein phosphatase non-receptor type 11
Authors:Cleasby, A, Price, A.
Deposit date:2024-02-14
Release date:2024-03-20
Last modified:2024-04-10
Method:X-RAY DIFFRACTION (1.834 Å)
Cite:Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2).
J.Med.Chem., 67, 2024

226262

数据于2024-10-16公开中

PDB statisticsPDBj update infoContact PDBjnumon