PDB: 73332 resultsInfo pagesStatus searchChemie searchBIRD

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4TUE	Crystal structure of ASL-SufJ bound to Codon ACC-U on the Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fagan, C.E, Dunham, C.M. Deposit date: 2014-06-24 Release date: 2015-05-13 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014
4TUD	Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fagan, C.E, Dunham, C.M. Deposit date: 2014-06-24 Release date: 2015-05-13 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014
4TUC	Crystal structure of ASL-SufJ bound to Codon ACC-A on the Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fagan, C.E, Dunham, C.M. Deposit date: 2014-06-24 Release date: 2015-05-13 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Structural insights into translational recoding by frameshift suppressor tRNASufJ. Rna, 20, 2014
5WE4	70S ribosome-EF-Tu wt complex with GppNHp Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fislage, M, Brown, Z, Frank, J. Deposit date: 2017-07-07 Release date: 2018-04-25 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
5WDT	70S ribosome-EF-Tu H84A complex with GppNHp Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Fislage, M, Brown, Z, Frank, J. Deposit date: 2017-07-06 Release date: 2018-04-25 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM shows stages of initial codon selection on the ribosome by aa-tRNA in ternary complex with GTP and the GTPase-deficient EF-TuH84A. Nucleic Acids Res., 46, 2018
5LZW	Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA. Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... Authors: Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S. Deposit date: 2016-10-02 Release date: 2016-11-30 Last modified: 2019-12-11 Method: ELECTRON MICROSCOPY (3.53 Å) Cite: Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes. Cell, 167, 2016
1Y42	Crystal structure of a C-terminally truncated CYT-18 protein Descriptor: TYROSINE, Tyrosyl-tRNA synthetase, mitochondrial Authors: Paukstelis, P.J, Coon, R, Madabusi, L, Nowakowski, J, Monzingo, A, Robertus, J, Lambowitz, A.M. Deposit date: 2004-11-29 Release date: 2005-02-15 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.95 Å) Cite: A tyrosyl-tRNA synthetase adapted to function in group I intron splicing by acquiring a new RNA binding surface. Mol.Cell, 17, 2005
6PPN	Structure of S. pombe Lsm2-8 with unprocessed U6 snRNA Descriptor: Mimic of unprocessed U6 snRNA, Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, ... Authors: Montemayor, E.J, Butcher, S.E. Deposit date: 2019-07-08 Release date: 2020-06-17 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes. Rna, 26, 2020
6PPP	Structure of S. pombe Lsm2-8 with processed U6 snRNA Descriptor: Mimic of processed U6 snRNA, Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, ... Authors: Montemayor, E.J, Butcher, S.E. Deposit date: 2019-07-08 Release date: 2020-06-17 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes. Rna, 26, 2020
6PPQ	Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' adenosine Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, RNA (5'-R(*UP*UP*UP*UP*UP*A)-3'), ... Authors: Montemayor, E.J, Butcher, S.E. Deposit date: 2019-07-08 Release date: 2020-06-17 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes. Rna, 26, 2020
6PPV	Structure of S. pombe Lsm1-7 with RNA, polyuridine with 3' guanosine Descriptor: Probable U6 snRNA-associated Sm-like protein LSm3, Probable U6 snRNA-associated Sm-like protein LSm4, RNA (5'-R(*AP*UP*UP*UP*UP*G)-3'), ... Authors: Montemayor, E.J, Butcher, S.E. Deposit date: 2019-07-08 Release date: 2020-06-17 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes. Rna, 26, 2020
5EKD	Human mitochondrial tryptophanyl-tRNA synthetase bound by indolmycin and Mn*ATP. Descriptor: (5S)-5-[(1R)-1-(1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4(5H)-one, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ... Authors: Williams, T.L, Carter Jr, C.W. Deposit date: 2015-11-03 Release date: 2016-11-16 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Binding of Mg2+ATP Enhances Inhibition of Human Mitochondrial Tryptophanyl-tRNA Synthetase by Indolmycin To Be Published
4LY6	Nucleotide-induced asymmetry within ATPase activator ring drives s54-RNAP interaction and ATP hydrolysis Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcriptional regulator (NtrC family), ... Authors: Sysoeva, T.A, Chowdhury, S, Guo, L, Nixon, B.T. Deposit date: 2013-07-30 Release date: 2013-12-04 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.6 Å) Cite: Nucleotide-induced asymmetry within ATPase activator ring drives sigma 54-RNAP interaction and ATP hydrolysis. Genes Dev., 27, 2013
3N9I	Crystal structure of tryptophanyl-tRNA synthetase from Yersinia pestis CO92 Descriptor: CALCIUM ION, GLYCEROL, Tryptophanyl-tRNA synthetase Authors: Nocek, B, Maltseva, N, Papazisi, L, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2010-05-30 Release date: 2010-07-21 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structure of tryptophanyl-tRNA synthetase from Yersinia pestis CO92 TO BE PUBLISHED
8VS9	Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site and deacyl-tRNA in the E site of E. coli 70S ribosome Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Teran, D, Zhang, Y, Korostelev, A.A. Deposit date: 2024-01-23 Release date: 2024-05-01 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon. Front Microbiol, 15, 2024
8VSA	Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosome Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Teran, D, Zhang, Y, Korostelev, A.A. Deposit date: 2024-01-23 Release date: 2024-05-01 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon. Front Microbiol, 15, 2024
1YIA	Crystal structure of tryptophanyl tRNA synthetase II from Deinococcus radiodurans in complex with 5-Hydroxy tryptophan. Descriptor: 5-HYDROXY-L-TRYPTOPHAN, tryptophanyl-tRNA synthetase Authors: Buddha, M.R, Crane, B.R. Deposit date: 2005-01-11 Release date: 2005-02-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.7 Å) Cite: Structure and activity of an aminoacyl-tRNA synthetase that charges tRNA with nitro-tryptophan. Nat.Struct.Mol.Biol., 12, 2005
1YI8	Crystal structure of tryptophanyl trRNA synthetase II from Deinococcus radiodurans in complex with L-Trp Descriptor: TRYPTOPHAN, tryptophanyl-tRNA synthetase Authors: Buddha, M.R, Crane, B.R. Deposit date: 2005-01-11 Release date: 2005-02-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure and activity of an aminoacyl-tRNA synthetase that charges tRNA with nitro-tryptophan. Nat.Struct.Mol.Biol., 12, 2005
8BH4	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-10-29 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.62 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BHN	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-10-31 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.85 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BHJ	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-10-31 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.81 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
8BF7	Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site Descriptor: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ... Authors: Koziej, L, Glatt, S. Deposit date: 2022-10-24 Release date: 2023-08-16 Method: ELECTRON MICROSCOPY (2.33 Å) Cite: Modulation of translational decoding by m 6 A modification of mRNA. Nat Commun, 14, 2023
7ZTA	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Leroy, E.C, Perry, T.N, Renault, T.T, Innis, C.A. Deposit date: 2022-05-09 Release date: 2023-04-12 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Tetracenomycin X sequesters peptidyl-tRNA during translation of QK motifs. Nat.Chem.Biol., 19, 2023
6PMO	Co-crystal structure of the Geobacillus kaustophilus glyQ T-box riboswitch discriminator domain in complex with tRNA-Gly Descriptor: IRIDIUM ION, MAGNESIUM ION, T-box riboswitch discriminator, ... Authors: Li, S, Zhang, J. Deposit date: 2019-07-02 Release date: 2019-11-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.65703368 Å) Cite: Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions. Nat.Struct.Mol.Biol., 26, 2019
6POM	Cryo-EM structure of the full-length Bacillus subtilis glyQS T-box riboswitch in complex with tRNA-Gly Descriptor: T-box GlyQS leader (155-MER), tRNAGly (75-MER) Authors: Li, S, Su, Z, Zhang, J, Chiu, W. Deposit date: 2019-07-04 Release date: 2019-11-20 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4.9 Å) Cite: Structural basis of amino acid surveillance by higher-order tRNA-mRNA interactions. Nat.Struct.Mol.Biol., 26, 2019

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