Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4F1Y
DownloadVisualize
BU of 4f1y by Molmil
CNQX bound to the ligand binding domain of GluA3
Descriptor: 7-nitro-2,3-dioxo-2,3-dihydroquinoxaline-6-carbonitrile, Glutamate receptor 3, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2012-05-07
Release date:2012-05-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The loss of an electrostatic contact unique to AMPA receptor ligand binding domain 2 slows channel activation.
Biochemistry, 51, 2012
4F2Q
DownloadVisualize
BU of 4f2q by Molmil
Quisqualate bound to the D655A mutant of the ligand binding domain of GluA3
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, Glutamate receptor 3, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2012-05-08
Release date:2012-05-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:The loss of an electrostatic contact unique to AMPA receptor ligand binding domain 2 slows channel activation.
Biochemistry, 51, 2012
4F22
DownloadVisualize
BU of 4f22 by Molmil
Kainate bound to the K660A mutant of the ligand binding domain of GluA3
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 3, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2012-05-07
Release date:2012-05-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:The loss of an electrostatic contact unique to AMPA receptor ligand binding domain 2 slows channel activation.
Biochemistry, 51, 2012
4F2O
DownloadVisualize
BU of 4f2o by Molmil
Quisqualate bound to the D655A mutant of the ligand binding domain of GluA3
Descriptor: (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)-PROPIONIC ACID, Glutamate receptor 3, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2012-05-08
Release date:2012-05-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.912 Å)
Cite:The loss of an electrostatic contact unique to AMPA receptor ligand binding domain 2 slows channel activation.
Biochemistry, 51, 2012
4F3G
DownloadVisualize
BU of 4f3g by Molmil
Kainate bound to the ligand binding domain of GluA3i
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 3, ZINC ION
Authors:Ahmed, A.H, Oswald, R.E.
Deposit date:2012-05-09
Release date:2012-05-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.064 Å)
Cite:The loss of an electrostatic contact unique to AMPA receptor ligand binding domain 2 slows channel activation.
Biochemistry, 51, 2012
1U3C
DownloadVisualize
BU of 1u3c by Molmil
Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana
Descriptor: CHLORIDE ION, Cryptochrome 1 apoprotein, ETHYL DIMETHYL AMMONIO PROPANE SULFONATE, ...
Authors:Brautigam, C.A, Smith, B.S, Ma, Z, Palnitkar, M, Tomchick, D.R, Machius, M, Deisenhofer, J.
Deposit date:2004-07-21
Release date:2004-08-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Proc.Natl.Acad.Sci.USA, 101, 2004
1U3D
DownloadVisualize
BU of 1u3d by Molmil
Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana with AMPPNP bound
Descriptor: CHLORIDE ION, Cryptochrome 1 apoprotein, ETHYL DIMETHYL AMMONIO PROPANE SULFONATE, ...
Authors:Brautigam, C.A, Smith, B.S, Ma, Z, Palnitkar, M, Tomchick, D.R, Machius, M, Deisenhofer, J.
Deposit date:2004-07-21
Release date:2004-08-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of the photolyase-like domain of cryptochrome 1 from Arabidopsis thaliana.
Proc.Natl.Acad.Sci.USA, 101, 2004
8AQJ
DownloadVisualize
BU of 8aqj by Molmil
Hydrophobic probe bound to Streptavidin - 2
Descriptor: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[6-(dimethylamino)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]ethyl]pentanamide, Streptavidin
Authors:Igareta, N.V, Ward, T.R.
Deposit date:2022-08-12
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Hydrophobic probe bound to Streptavidin - 2
To Be Published
4Q5P
DownloadVisualize
BU of 4q5p by Molmil
Lysine-Ligated Yeast Iso-1 Cytochrome C
Descriptor: Cytochrome c iso-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Amacher, J.F, Zhu, M.Q, Zhong, F, Pletneva, E.V, Madden, D.R.
Deposit date:2014-04-17
Release date:2015-04-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch.
J.Am.Chem.Soc., 137, 2015
3DRC
DownloadVisualize
BU of 3drc by Molmil
INVESTIGATION OF THE FUNCTIONAL ROLE OF TRYPTOPHAN-22 IN ESCHERICHIA COLI DIHYDROFOLATE REDUCTASE BY SITE-DIRECTED MUTAGENESIS
Descriptor: CALCIUM ION, CHLORIDE ION, DIHYDROFOLATE REDUCTASE, ...
Authors:Oatley, S.J, Kraut, J.
Deposit date:1992-09-22
Release date:1994-01-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Investigation of the functional role of tryptophan-22 in Escherichia coli dihydrofolate reductase by site-directed mutagenesis.
Biochemistry, 30, 1991
6DET
DownloadVisualize
BU of 6det by Molmil
The crystal structure of Tv2483 bound to L-arginine
Descriptor: ARGININE, Tv2483
Authors:Brautigam, C.A, Norgard, M.V.
Deposit date:2018-05-13
Release date:2019-03-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Biophysical insights into a highly selective l-arginine-binding lipoprotein of a pathogenic treponeme.
Protein Sci., 27, 2018
3U65
DownloadVisualize
BU of 3u65 by Molmil
The Crystal Structure of Tat-P(T) (Tp0957)
Descriptor: 1,2-ETHANEDIOL, THIOCYANATE ION, Tp33 protein
Authors:Brautigam, C.A, Tomchick, D.R, Deka, R.K, Norgard, M.V.
Deposit date:2011-10-12
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural, Bioinformatic, and In Vivo Analyses of Two Treponema pallidum Lipoproteins Reveal a Unique TRAP Transporter.
J.Mol.Biol., 416, 2012
6BEH
DownloadVisualize
BU of 6beh by Molmil
Crystal structure of VACV D13 in complex with Rifapentine
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, RIFAPENTINE, ...
Authors:Garriga, D, Accurso, C, Coulibaly, F.
Deposit date:2017-10-25
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3HC8
DownloadVisualize
BU of 3hc8 by Molmil
Investigation of Aminopyridiopyrazinones as PDE5 Inhibitors: Evaluation of Modifications to the Central Ring System.
Descriptor: 6-(6-methoxypyridin-3-yl)-2-[(2-morpholin-4-ylethyl)amino]-4-(2-propoxyethyl)pyrido[2,3-b]pyrazin-3(4H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Hughes, R.O, Stallings, W.C, Cubbage, J.W, Williams, J.M.
Deposit date:2009-05-05
Release date:2009-07-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Investigation of aminopyridiopyrazinones as PDE5 inhibitors: Evaluation of modifications to the central ring system.
Bioorg.Med.Chem.Lett., 19, 2009
5F8U
DownloadVisualize
BU of 5f8u by Molmil
Ligand occupancy in crystal structure of beta1-adrenergic receptor previously submitted by Huang et al
Descriptor: 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile, Beta-1 adrenergic receptor
Authors:Leslie, A.G.W, Warne, A, Tate, C.G.
Deposit date:2015-12-09
Release date:2015-12-23
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Ligand occupancy in crystal structure of Beta1 adrenergic G protein coupled receptor
Nat.Struct.Mol.Biol., 22, 2015
7UJJ
DownloadVisualize
BU of 7ujj by Molmil
Stx2a and DARPin complex
Descriptor: 1,2-ETHANEDIOL, 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, DARPin, ...
Authors:Jiang, M, Zhang, J.
Deposit date:2022-03-30
Release date:2023-04-12
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:A Multi-Specific DARPin Potently Neutralizes Shiga Toxin 2 via Simultaneous Modulation of Both Toxin Subunits.
Bioengineering (Basel), 9, 2022
8SZ2
DownloadVisualize
BU of 8sz2 by Molmil
Stx2A1 bound to P8 stalk peptide
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, NONAETHYLENE GLYCOL, ...
Authors:rudolph, M.J, Li, X.P.
Deposit date:2023-05-26
Release date:2024-05-29
Last modified:2024-12-11
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure-Function Analysis of the A1 Subunit of Shiga Toxin 2 with Peptides That Target the P-Stalk Binding Site and Inhibit Activity.
Biochemistry, 63, 2024
7OL8
DownloadVisualize
BU of 7ol8 by Molmil
Crystal structure of Lysozyme in complex with trifluoroethanol: orthorhombic form
Descriptor: CHLORIDE ION, Lysozyme, SULFATE ION, ...
Authors:Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M.
Deposit date:2021-05-19
Release date:2022-06-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of Lysozyme in complex with TFE
To be published
7OL6
DownloadVisualize
BU of 7ol6 by Molmil
Crystal structure of Lysozyme in complex with Imidazole
Descriptor: CHLORIDE ION, IMIDAZOLE, Lysozyme, ...
Authors:Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M.
Deposit date:2021-05-19
Release date:2022-06-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of Lysozyme in complex with Imidazole
To be published
7OL7
DownloadVisualize
BU of 7ol7 by Molmil
Crystal structure of Lysozyme in complex with trifluoroethanol: tetragonal form
Descriptor: CHLORIDE ION, Lysozyme, SODIUM ION, ...
Authors:Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M.
Deposit date:2021-05-19
Release date:2022-06-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of Lysozyme in complex with TFE
To be published
7OL5
DownloadVisualize
BU of 7ol5 by Molmil
Crystal structure of Lysozyme in complex with Hepes
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ISOPROPYL ALCOHOL, Lysozyme
Authors:Camara-Artigas, A, Salinas-Garcia, M.C, Plaza-Garrido, M.
Deposit date:2021-05-19
Release date:2022-06-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Crystal structure of Lysozyme in complex with Hepes
To be published
5UN2
DownloadVisualize
BU of 5un2 by Molmil
Crystal Structure of Mouse Cadherin-23 EC19-21 with non-syndromic deafness (DFNB12) associated mutation R2029W
Descriptor: CALCIUM ION, Cadherin-23, POTASSIUM ION
Authors:Jaiganesh, A, Sotomayor, M.
Deposit date:2017-01-30
Release date:2018-02-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
1JDL
DownloadVisualize
BU of 1jdl by Molmil
Structure of cytochrome c2 from Rhodospirillum Centenum
Descriptor: CYTOCHROME C2, ISO-2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Camara-Artigas, A, Williams, J.C, Allen, J.P.
Deposit date:2001-06-14
Release date:2001-11-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of cytochrome c2 from Rhodospirillum centenum.
Acta Crystallogr.,Sect.D, 57, 2001
1D1I
DownloadVisualize
BU of 1d1i by Molmil
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
Descriptor: SHIGA TOXIN B-CHAIN, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Ling, H, Boodhoo, A, Brunton, J.L, Read, R.J.
Deposit date:1999-09-17
Release date:2000-09-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mutated Shiga-like Toxin B Subunit (W34A) Complexed with Receptor Gb3 Analogue
To be Published
9F7Q
DownloadVisualize
BU of 9f7q by Molmil
SARS-CoV-2 papain-like protease (PLpro) C112S mutant
Descriptor: GLYCEROL, Replicase polyprotein 1ab, SULFATE ION, ...
Authors:Camara-Artigas, A.
Deposit date:2024-05-04
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SARS-CoV-2 papain-like protease (PLpro) C112S mutant
To Be Published

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon