Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3QY1
DownloadVisualize
BU of 3qy1 by Molmil
1.54A Resolution Crystal Structure of a Beta-Carbonic Anhydrase from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Descriptor: Carbonic anhydrase, ZINC ION
Authors:Brunzelle, J.S, Wawrzak, Z, Onopriyenko, O, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-03-02
Release date:2011-03-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:1.54A Resolution Crystal Structure of a Beta-Carbonic Anhydrase from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
To be Published
5ZO1
DownloadVisualize
BU of 5zo1 by Molmil
Crystal structure of mouse nectin-like molecule 4 (mNecl-4) full ectodomain (Ig1-Ig3), 2.2A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Cell adhesion molecule 4, GLYCEROL
Authors:Liu, X, An, T, Li, D, Fan, Z, Xiang, P, Li, C, Ju, W, Li, J, Hu, G, Qin, B, Yin, B, Wojdyla, J.A, Wang, M, Yuan, J, Qiang, B, Shu, P, Cui, S, Peng, X.
Deposit date:2018-04-12
Release date:2019-01-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structure of the heterophilic interaction between the nectin-like 4 and nectin-like 1 molecules.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6HZN
DownloadVisualize
BU of 6hzn by Molmil
Crystal structure of human dermatan sulfate epimerase 1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hasan, M, Unge, J, Westergren-Thorsson, G, Ellervik, U, Mueller, U, Malmstrom, A, Tykesson, E.
Deposit date:2018-10-23
Release date:2020-01-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:The structure of human dermatan sulfate epimerase 1 emphasizes the importance of C5-epimerization of glucuronic acid in higher organisms
Chem Sci, 2020
1X0V
DownloadVisualize
BU of 1x0v by Molmil
Crystal Structure of Homo Sapien Glycerol-3-Phosphate Dehydrogenase 1
Descriptor: Glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic, SULFATE ION
Authors:Rao, Z, Ou, X.
Deposit date:2005-03-30
Release date:2006-04-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Human Glycerol 3-phosphate Dehydrogenase 1 (GPD1)
J.Mol.Biol., 357, 2006
7CP5
DownloadVisualize
BU of 7cp5 by Molmil
Bovine heart cytochrome c oxidase in a catalytic intermediate of E at 1.76 angstrom resolution
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Tsukihara, T, Shimada, A.
Deposit date:2020-08-06
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Critical roles of the Cu B site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates.
J.Biol.Chem., 297, 2021
3KKI
DownloadVisualize
BU of 3kki by Molmil
PLP-Dependent Acyl-CoA transferase CqsA
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CAI-1 autoinducer synthase, MAGNESIUM ION, ...
Authors:Kelly, R.C, Jeffrey, P.D, Hughson, F.M.
Deposit date:2009-11-05
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Vibrio cholerae quorum-sensing autoinducer CAI-1: analysis of the biosynthetic enzyme CqsA.
Nat.Chem.Biol., 5, 2009
5ELW
DownloadVisualize
BU of 5elw by Molmil
A. thaliana IGPD2 in complex with the triazole-phosphonate inhibitor, (R)-C348, to 1.36A resolution
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
Authors:Bisson, C, Britton, K.L, Sedelnikova, S.E, Rodgers, H.F, Eadsforth, T.C, Viner, R.C, Hawkes, T.R, Baker, P.J, Rice, D.W.
Deposit date:2015-11-05
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mirror-Image Packing Provides a Molecular Basis for the Nanomolar Equipotency of Enantiomers of an Experimental Herbicide.
Angew.Chem.Int.Ed.Engl., 55, 2016
5WRK
DownloadVisualize
BU of 5wrk by Molmil
Mu2 subunit of the clathrin adaptor complex AP2 in complex with IRS-1 Y608 peptide
Descriptor: AP-2 complex subunit mu, Insulin receptor substrate 1, NICKEL (II) ION
Authors:Yoneyama, Y, Niwa, H, Umehara, T, Yokoyama, S, Hakuno, F, Takahashi, S.
Deposit date:2016-12-02
Release date:2017-12-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:IRS-1 acts as an endocytic regulator of IGF-I receptor to facilitate sustained IGF signaling
Elife, 7, 2018
5WV3
DownloadVisualize
BU of 5wv3 by Molmil
Crystal structure of bovine lactoperoxidase with a partial Glu258-heme linkage at 2.07 A resolution.
Descriptor: 1-(OXIDOSULFANYL)METHANAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Singh, P.K, Sirohi, H.V, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2016-12-21
Release date:2017-02-15
Last modified:2025-03-12
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural basis of activation of mammalian heme peroxidases
Prog. Biophys. Mol. Biol., 133, 2018
4KAK
DownloadVisualize
BU of 4kak by Molmil
Crystal structure of human dihydrofolate reductase complexed with NADPH and 6-ethyl-5-[(3S)-3-[3-methoxy-5-(pyridine-4-yl)phenyl]but-1-yn-1-yl]pyrimidine-2,4-diamine (UCP1006)
Descriptor: 6-ethyl-5-{(3R)-3-[3-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine, CALCIUM ION, Dihydrofolate reductase, ...
Authors:Lamb, K.M, Anderson, A.C.
Deposit date:2013-04-22
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Elucidating features that drive the design of selective antifolates using crystal structures of human dihydrofolate reductase.
Biochemistry, 52, 2013
2AQH
DownloadVisualize
BU of 2aqh by Molmil
Crystal structure of Isoniazid-resistant I21V Enoyl-ACP(CoA) reductase mutant enzyme from Mycobacterium tuberculosis in complex with NADH
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Enoyl-[acyl-carrier-protein] reductase [NADH]
Authors:Oliveira, J.S, Pereira, J.H, Rodrigues, N.C, Canduri, F, de Souza, O.N, Basso, L.A, de Azevedo Jr, W.F, Santos, D.S.
Deposit date:2005-08-18
Release date:2006-05-23
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystallographic and Pre-steady-state Kinetics Studies on Binding of NADH to Wild-type and Isoniazid-resistant Enoyl-ACP(CoA) Reductase Enzymes from Mycobacterium tuberculosis.
J.Mol.Biol., 359, 2006
4D74
DownloadVisualize
BU of 4d74 by Molmil
1.57 A crystal structure of erwinia amylovora tyrosine phosphatase amsI
Descriptor: PROTEIN-TYROSINE-PHOSPHATASE AMSI, SULFATE ION
Authors:Benini, S, Salomone-Stagni, M, Caputi, L, Cianci, M.
Deposit date:2014-11-19
Release date:2016-01-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Characterization and 1.57 A Resolution Structure of the Key Fire Blight Phosphatase Amsi from Erwinia Amylovora
Acta Crystallogr.,Sect.F, 72, 2016
1Y7T
DownloadVisualize
BU of 1y7t by Molmil
Crystal structure of NAD(H)-depenent malate dehydrogenase complexed with NADPH
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Malate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Tomita, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
Deposit date:2004-12-10
Release date:2005-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of NAD-dependent malate dehydrogenase complexed with NADP(H)
Biochem.Biophys.Res.Commun., 334, 2005
7YUY
DownloadVisualize
BU of 7yuy by Molmil
Structure of a mutated membrane-bound glycosyltransferase
Descriptor: (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate, 1,3-beta-glucan synthase component FKS1, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hu, X.L, Yang, P, Zhang, M, Liu, X.T, Yu, H.J.
Deposit date:2022-08-18
Release date:2023-03-29
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural and mechanistic insights into fungal beta-1,3-glucan synthase FKS1.
Nature, 616, 2023
1NR0
DownloadVisualize
BU of 1nr0 by Molmil
Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. elegans Homologue Of Yeast Actin Interacting Protein 1 (AIP1).
Descriptor: Actin interacting protein 1, MANGANESE (II) ION
Authors:Vorobiev, S.M, Mohri, K, Ono, S, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-01-23
Release date:2003-07-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification of Functional Residues on Caenorhabditis elegans Actin-interacting Protein 1 (UNC-78) for Disassembly of Actin Depolymerizing Factor/Cofilin-bound Actin Filaments
J.Biol.Chem., 279, 2004
4GUC
DownloadVisualize
BU of 4guc by Molmil
1.4 Angstrom resolution crystal structure of uncharacterized protein BA_2500 from Bacillus anthracis str. Ames
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Protein BA_2500, ...
Authors:Halavaty, A.S, Wawrzak, Z, Onopriyenko, O, Kwon, K, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-08-29
Release date:2012-10-10
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:1.4 Angstrom resolution crystal structure of uncharacterized protein BA_2500 from Bacillus anthracis str. Ames
To be Published
3CMC
DownloadVisualize
BU of 3cmc by Molmil
Thioacylenzyme intermediate of Bacillus stearothermophilus phosphorylating GAPDH
Descriptor: 1,2-ETHANEDIOL, GLYCERALDEHYDE-3-PHOSPHATE, GLYCEROL, ...
Authors:Moniot, S, Vonrhein, C, Bricogne, G, Didierjean, C, Corbier, C.
Deposit date:2008-03-21
Release date:2008-06-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Trapping of the Thioacylglyceraldehyde-3-phosphate Dehydrogenase Intermediate from Bacillus stearothermophilus: DIRECT EVIDENCE FOR A FLIP-FLOP MECHANISM
J.Biol.Chem., 283, 2008
1Z5Y
DownloadVisualize
BU of 1z5y by Molmil
Crystal Structure Of The Disulfide-Linked Complex Between The N-Terminal Domain Of The Electron Transfer Catalyst DsbD and The Cytochrome c Biogenesis Protein CcmG
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Thiol:disulfide interchange protein dsbD, ...
Authors:Stirnimann, C.U, Rozhkova, A, Grauschopf, U, Gruetter, M.G, Glockshuber, R, Capitani, G.
Deposit date:2005-03-21
Release date:2005-07-19
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural Basis and Kinetics of DsbD-Dependent Cytochrome c Maturation
STRUCTURE, 13, 2005
4H3D
DownloadVisualize
BU of 4h3d by Molmil
1.95 Angstrom Crystal Structure of of Type I 3-Dehydroquinate Dehydratase (aroD) from Clostridium difficile with Covalent Modified Comenic Acid.
Descriptor: 3-dehydroquinate dehydratase, 5-hydroxy-6-methyl-4-oxo-4H-pyran-2-carboxylic acid, ACETATE ION, ...
Authors:Minasov, G, Light, S.H, Shuvalova, L, Duban, M.-E, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-09-13
Release date:2012-09-26
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:1.95 Angstrom Crystal Structure of of Type I 3-Dehydroquinate Dehydratase (aroD) from Clostridium difficile with Covalent Modified Comenic Acid.
TO BE PUBLISHED
5ZF0
DownloadVisualize
BU of 5zf0 by Molmil
X-ray Structure of the Electron Transfer Complex between Ferredoxin and Photosystem I
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Kubota-Kawai, H, Mutoh, R, Shinmura, K, Setif, P, Nowaczyk, M, Roegner, M, Ikegami, T, Tanaka, T, Kurisu, G.
Deposit date:2018-03-01
Release date:2018-04-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:X-ray structure of an asymmetrical trimeric ferredoxin-photosystem I complex
Nat Plants, 4, 2018
5Z06
DownloadVisualize
BU of 5z06 by Molmil
Crystal structure of beta-1,2-glucanase from Parabacteroides distasonis
Descriptor: BDI_3064 protein, CALCIUM ION, GLYCEROL
Authors:Shimizu, H, Nakajima, M, Miyanaga, A, Takahashi, Y, Tanaka, N, Kobayashi, K, Sugimoto, N, Nakai, H, Taguchi, H.
Deposit date:2017-12-18
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization and Structural Analysis of a Novel exo-Type Enzyme Acting on beta-1,2-Glucooligosaccharides from Parabacteroides distasonis
Biochemistry, 57, 2018
1ZGK
DownloadVisualize
BU of 1zgk by Molmil
1.35 angstrom structure of the Kelch domain of Keap1
Descriptor: Kelch-like ECH-associated protein 1
Authors:Li, X, Bottoms, C.A, Hannink, M, Beamer, L.J.
Deposit date:2005-04-21
Release date:2005-10-04
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Conserved solvent and side-chain interactions in the 1.35 Angstrom structure of the Kelch domain of Keap1.
Acta Crystallogr.,Sect.D, 61, 2005
3UVE
DownloadVisualize
BU of 3uve by Molmil
Crystal structure of Carveol dehydrogenase ((+)-trans-carveol dehydrogenase) from Mycobacterium avium
Descriptor: 1,2-ETHANEDIOL, Carveol dehydrogenase ((+)-trans-carveol dehydrogenase), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-11-29
Release date:2011-12-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
4KD7
DownloadVisualize
BU of 4kd7 by Molmil
Human dihydrofolate reductase complexed with NADPH and 5-{3-[3-methoxy-5(pyridine-4-yl)phenyl]prop-1-yn-1-yl}-6-ethyl-pyrimidine-2,4-diamine
Descriptor: 6-ethyl-5-{3-[3-methoxy-5-(pyridin-4-yl)phenyl]prop-1-yn-1-yl}pyrimidine-2,4-diamine, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Lamb, K.M, Anderson, A.C.
Deposit date:2013-04-24
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.715 Å)
Cite:Elucidating features that drive the design of selective antifolates using crystal structures of human dihydrofolate reductase.
Biochemistry, 52, 2013
6J15
DownloadVisualize
BU of 6j15 by Molmil
Complex structure of GY-5 Fab and PD-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GY-5 heavy chain Fab, ...
Authors:Chen, D, Tan, S, Zhang, H, Wang, H, Chai, Y, Qi, J, Yan, J, Gao, G.F.
Deposit date:2018-12-27
Release date:2019-11-06
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The FG Loop of PD-1 Serves as a "Hotspot" for Therapeutic Monoclonal Antibodies in Tumor Immune Checkpoint Therapy.
Iscience, 14, 2019

242842

数据于2025-10-08公开中

PDB statisticsPDBj update infoContact PDBjnumon