Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1OFD
DownloadVisualize
BU of 1ofd by Molmil
Glutamate Synthase from Synechocystis sp in complex with 2-Oxoglutarate at 2.0 Angstrom resolution
Descriptor: 2-OXOGLUTARIC ACID, FE3-S4 CLUSTER, FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 2, ...
Authors:Van Den heuvel, R.H.H, Mattevi, A.
Deposit date:2003-04-14
Release date:2003-06-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Active Conformation of Glutamate Synthase and its Binding to Ferredoxin
J.Mol.Biol., 330, 2003
8B8S
DownloadVisualize
BU of 8b8s by Molmil
Solution structure of tandem RRM1 and RRM2 domains of yeast NPL3
Descriptor: Serine/arginine (SR)-type shuttling mRNA binding protein NPL3
Authors:Kachariya, N, Sattler, M, Keil, P, Strasser, K.
Deposit date:2022-10-04
Release date:2022-11-09
Last modified:2024-06-19
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Npl3 functions in mRNP assembly by recruitment of mRNP components to the transcription site and their transfer onto the mRNA.
Nucleic Acids Res., 51, 2023
8BGC
DownloadVisualize
BU of 8bgc by Molmil
Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with compound 2 (AA-CS-9-003)
Descriptor: 5-[(phenylmethyl)amino]pyrimido[4,5-c]quinoline-8-carboxylic acid, Casein kinase II subunit alpha, SULFATE ION
Authors:Kraemer, A, Axtman, A.D, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-10-27
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of a Potent and Selective Naphthyridine-Based Chemical Probe for Casein Kinase 2.
Acs Med.Chem.Lett., 14, 2023
5V7R
DownloadVisualize
BU of 5v7r by Molmil
Cyrstal structure of anti-Tau antibody CBTAU-7.1 Fab
Descriptor: CBTAU-7.1 Fab heavy chain, CBTAU-7.1 Fab light chain
Authors:Zhu, X, Zhang, H, Wilson, I.A.
Deposit date:2017-03-20
Release date:2017-04-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Immunological memory to hyperphosphorylated tau in asymptomatic individuals.
Acta Neuropathol., 133, 2017
5USL
DownloadVisualize
BU of 5usl by Molmil
Structure of vaccinia virus D8 protein bound to human Fab vv304
Descriptor: Fab vv304 Heavy chain, Fab vv304 Light chain, IMV membrane protein
Authors:Zajonc, D.M.
Deposit date:2017-02-13
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-function characterization of three human antibodies targeting the vaccinia virus adhesion molecule D8.
J. Biol. Chem., 293, 2018
8B8F
DownloadVisualize
BU of 8b8f by Molmil
Atomic structure of the beta-trefoil domain of the Laccaria bicolor lectin LBL in complex with lactose
Descriptor: N-terminal beta-trefoil domain of the lectin LBL from Laccaria bicolor, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Acebron, I, Campanero-Rhodes, M.A, Solis, D, Menendez, M, Garcia, C, Lillo, M.P, Mancheno, J.M.
Deposit date:2022-10-04
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1 Å)
Cite:Atomic crystal structure and sugar specificity of a beta-trefoil lectin domain from the ectomycorrhizal basidiomycete Laccaria bicolor.
Int.J.Biol.Macromol., 233, 2023
8B97
DownloadVisualize
BU of 8b97 by Molmil
N-terminal beta-trefoil lectin domain of the Laccaria bicolor lectin in complex with N-acetyl-lactosamine
Descriptor: Beta-trefoil domain of the LBL lectin, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Acebron, I, Campanero-Rhodes, M.A, Solis, D, Menendez, M, Garcia, C, Lillo, M.P, Mancheno, J.M.
Deposit date:2022-10-05
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Atomic crystal structure and sugar specificity of a beta-trefoil lectin domain from the ectomycorrhizal basidiomycete Laccaria bicolor.
Int.J.Biol.Macromol., 233, 2023
5UNJ
DownloadVisualize
BU of 5unj by Molmil
Structure of Human Liver Receptor Homolog 1 in complex with PGC1a and RJW100
Descriptor: (1R,3aR,6aR)-5-hexyl-4-phenyl-3a-(1-phenylethenyl)-1,2,3,3a,6,6a-hexahydropentalen-1-ol, Nuclear receptor subfamily 5 group A member 2, Peroxisome proliferator-activated gamma coactivator 1-alpha
Authors:Mays, S.G, Ortlund, E.A.
Deposit date:2017-01-31
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.959 Å)
Cite:Structure and Dynamics of the Liver Receptor Homolog 1-PGC1 alpha Complex.
Mol. Pharmacol., 92, 2017
5UOH
DownloadVisualize
BU of 5uoh by Molmil
Crystal Structure of Hip1 (Rv2224c) T466A mutant
Descriptor: Carboxylesterase A
Authors:Naffin-Olivos, J.L, Daab, A, White, A, Goldfarb, N, Milne, A.C, Liu, D, Baikovitz, J, Dunn, B.M, Rengarajan, J, Petsko, G.A, Ringe, D.
Deposit date:2017-01-31
Release date:2017-04-12
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (2.609 Å)
Cite:Structure Determination of Mycobacterium tuberculosis Serine Protease Hip1 (Rv2224c).
Biochemistry, 56, 2017
5V8C
DownloadVisualize
BU of 5v8c by Molmil
LytR-Csp2A-Psr enzyme from Actinomyces oris
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, COBALT (II) ION, PHOSPHATE ION, ...
Authors:Amer, B.R, Sawaya, M.R, Liauw, B, Fu, J.Y, Ton-That, H, Clubb, R.T.
Deposit date:2017-03-21
Release date:2018-04-11
Last modified:2020-01-08
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure and Mechanism of LcpA, a Phosphotransferase That Mediates Glycosylation of a Gram-Positive Bacterial Cell Wall-Anchored Protein.
MBio, 10, 2019
5V17
DownloadVisualize
BU of 5v17 by Molmil
HnRNP A1 Alters the Conformation of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation
Descriptor: RNA (41-MER)
Authors:Tolbert, M, Morgan, C.E, Tolbert, B.S.
Deposit date:2017-03-01
Release date:2017-07-12
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:HnRNP A1 Alters the Structure of a Conserved Enterovirus IRES Domain to Stimulate Viral Translation.
J. Mol. Biol., 429, 2017
1PX3
DownloadVisualize
BU of 1px3 by Molmil
E. COLI (LACZ) BETA-GALACTOSIDASE (G794A)
Descriptor: DIMETHYL SULFOXIDE, MAGNESIUM ION, SODIUM ION, ...
Authors:Juers, D.H, Hakda, S, Matthews, B.W, Huber, R.E.
Deposit date:2003-07-02
Release date:2004-06-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis for the Altered Activity of Gly794 Variants of Escherichia coli Beta-Galactosidase
Biochemistry, 42, 2003
5T46
DownloadVisualize
BU of 5t46 by Molmil
Crystal structure of the human eIF4E-eIF4G complex
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE, Eukaryotic translation initiation factor 4 gamma 1, Eukaryotic translation initiation factor 4E, ...
Authors:Gruener, S, Peter, D, Weber, R, Wohlbold, L, Chung, M.-Y, Weichenrieder, O, Valkov, E, Igreja, C, Izaurralde, E.
Deposit date:2016-08-29
Release date:2016-10-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The Structures of eIF4E-eIF4G Complexes Reveal an Extended Interface to Regulate Translation Initiation.
Mol.Cell, 64, 2016
5UBX
DownloadVisualize
BU of 5ubx by Molmil
Crystal structure of a mutant mIgG2b Fc heterodimer in complex with Protein A peptide analog Z34C
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Ig gamma-2B chain C region, ...
Authors:Armstrong, A.A, Zwolak, A, Gilliland, G.L.
Deposit date:2016-12-21
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Modulation of protein A binding allows single-step purification of mouse bispecific antibodies that retain FcRn binding.
MAbs, 9, 2017
5V38
DownloadVisualize
BU of 5v38 by Molmil
Crystal Structure of The Receptor-binding Domain of Botulinum Neurotoxin Type HA
Descriptor: ACETIC ACID, HcHA
Authors:Yao, G, Lam, K.-H, Jin, R.
Deposit date:2017-03-06
Release date:2017-03-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Receptor-Binding Domain of Botulinum Neurotoxin Type HA, Also Known as Type FA or H.
Toxins (Basel), 9, 2017
8BG8
DownloadVisualize
BU of 8bg8 by Molmil
SARS-CoV-2 S protein in complex with pT1696 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, pT1696 Fab heavy chain, ...
Authors:Hansen, G, Benecke, T, Vollmer, B, Gruenewald, K, Krey, T.
Deposit date:2022-10-27
Release date:2023-11-08
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Activity of broadly neutralizing antibodies against sarbecoviruses: a trade-off between SARS-CoV-2 variants and distant coronaviruses?
To be published
5V8Z
DownloadVisualize
BU of 5v8z by Molmil
Crystal structure of ERp29 D-domain in complex with the P-domain of calmegin
Descriptor: Calmegin, Endoplasmic reticulum resident protein 29
Authors:Kozlov, G, Munoz-Escobar, J, Gehring, K.
Deposit date:2017-03-22
Release date:2017-06-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:Mapping the ER Interactome: The P Domains of Calnexin and Calreticulin as Plurivalent Adapters for Foldases and Chaperones.
Structure, 25, 2017
1QJV
DownloadVisualize
BU of 1qjv by Molmil
Pectin methylesterase PemA from Erwinia chrysanthemi
Descriptor: CHLORIDE ION, PECTIN METHYLESTERASE
Authors:Jenkins, J, Mayans, O, Smith, D, Worboys, K, Pickersgill, R.
Deposit date:1999-07-05
Release date:2000-07-14
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Three-Dimensional Structure of Erwinia Chrysanthemi Pectin Methylesterase Reveals a Novel Esterase Active Site
J.Mol.Biol., 305, 2001
5UNO
DownloadVisualize
BU of 5uno by Molmil
Crystal Structure of Hip1 (Rv2224c)
Descriptor: Carboxylesterase A
Authors:Naffin-Olivos, J.L, Daab, A, White, A, Goldfarb, N, Milne, A.C, Liu, D, Dunn, B.M, Rengarajan, J, Petsko, G.A, Ringe, D.
Deposit date:2017-01-31
Release date:2017-04-12
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Structure Determination of Mycobacterium tuberculosis Serine Protease Hip1 (Rv2224c).
Biochemistry, 56, 2017
5V90
DownloadVisualize
BU of 5v90 by Molmil
Crystal structure of ERp29 D-domain in complex with the P-domain of calreticulin
Descriptor: Calreticulin, Endoplasmic reticulum resident protein 29, GLYCEROL
Authors:Kozlov, G, Munoz-Escobar, J, Gehring, K.
Deposit date:2017-03-22
Release date:2017-06-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.255 Å)
Cite:Mapping the ER Interactome: The P Domains of Calnexin and Calreticulin as Plurivalent Adapters for Foldases and Chaperones.
Structure, 25, 2017
8BVQ
DownloadVisualize
BU of 8bvq by Molmil
E. coli BAM complex (BamABCDE) bound to darobactin B
Descriptor: Darobactin-B, Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
Authors:Horne, J.E, Fenn, K.L, Radford, S.E, Ranson, N.A.
Deposit date:2022-12-05
Release date:2023-05-24
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Darobactin B Stabilises a Lateral-Closed Conformation of the BAM Complex in E. coli Cells.
Angew.Chem.Int.Ed.Engl., 62, 2023
8BWC
DownloadVisualize
BU of 8bwc by Molmil
E. coli BAM complex (BamABCDE) wild-type
Descriptor: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ...
Authors:Machin, J.M, Radford, S.E, Ranson, N.A.
Deposit date:2022-12-06
Release date:2023-05-24
Last modified:2023-09-06
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Darobactin B Stabilises a Lateral-Closed Conformation of the BAM Complex in E. coli Cells.
Angew.Chem.Int.Ed.Engl., 62, 2023
5TF1
DownloadVisualize
BU of 5tf1 by Molmil
Structure of chimeric 02-CC Fab, a VRC01-like germline antibody
Descriptor: 02-CC Fab Heavy chain, O2-CC Fab Light Chain
Authors:Pancera, M.
Deposit date:2016-09-23
Release date:2016-11-16
Last modified:2019-12-11
Method:X-RAY DIFFRACTION (1.858 Å)
Cite:Differences in Allelic Frequency and CDRH3 Region Limit the Engagement of HIV Env Immunogens by Putative VRC01 Neutralizing Antibody Precursors.
Cell Rep, 17, 2016
8C0B
DownloadVisualize
BU of 8c0b by Molmil
CryoEM structure of Aspergillus nidulans UTP-glucose-1-phosphate uridylyltransferase
Descriptor: UTP--glucose-1-phosphate uridylyltransferase
Authors:Han, X, D Angelo, C, Otamendi, A, Cifuente, J.O, de Astigarraga, E, Ochoa-Lizarralde, B, Grininger, M, Routier, F.H, Guerin, M.E, Fuehring, J, Etxebeste, O, Connell, S.R.
Deposit date:2022-12-16
Release date:2023-06-28
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.98 Å)
Cite:CryoEM analysis of the essential native UDP-glucose pyrophosphorylase from Aspergillus nidulans reveals key conformations for activity regulation and function.
Mbio, 14, 2023
5U1F
DownloadVisualize
BU of 5u1f by Molmil
Initial contact of HIV-1 Env with CD4: Cryo-EM structure of BG505 DS-SOSIP trimer in complex with CD4 and antibody PGT145
Descriptor: BG505 DS-SOSIP gp120, BG505 SOSIP gp41, PGT145 heavy chain, ...
Authors:Acharya, P, Kwong, P.D, Potter, C.S, Carragher, B.
Deposit date:2016-11-28
Release date:2017-02-22
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Quaternary contact in the initial interaction of CD4 with the HIV-1 envelope trimer.
Nat. Struct. Mol. Biol., 24, 2017

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon