Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3SLB
DownloadVisualize
BU of 3slb by Molmil
Crystal structure of BA2930 in complex with AcCoA and cytosine
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 6-AMINOPYRIMIDIN-2(1H)-ONE, ...
Authors:Klimecka, M.M, Chruszcz, M, Porebski, P.J, Cymborowski, M, Anderson, W, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-06-24
Release date:2011-07-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of BA2930 in complex with AcCoA and cytosine
TO BE PUBLISHED
1KCD
DownloadVisualize
BU of 1kcd by Molmil
Endopolygalacturonase I from Stereum purpureum complexed with two galacturonate at 1.15 A resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ENDOPOLYGALACTURONASE, ...
Authors:Shimizu, T, Nakatsu, T, Miyairi, K, Okuno, T, Kato, H.
Deposit date:2001-11-08
Release date:2002-06-05
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Active-site architecture of endopolygalacturonase I from Stereum purpureum revealed by crystal structures in native and ligand-bound forms at atomic resolution.
Biochemistry, 41, 2002
3OQP
DownloadVisualize
BU of 3oqp by Molmil
Crystal structure of a putative isochorismatase (Bxe_A0706) from BURKHOLDERIA XENOVORANS LB400 at 1.22 A resolution
Descriptor: CHLORIDE ION, Putative isochorismatase, TETRAETHYLENE GLYCOL
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-09-03
Release date:2010-10-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystal structure of a putative isochorismatase (Bxe_A0706) from BURKHOLDERIA XENOVORANS LB400 at 1.22 A resolution
To be published
1SYN
DownloadVisualize
BU of 1syn by Molmil
E. COLI THYMIDYLATE SYNTHASE IN COMPLEX WITH BW1843U89 AND 2'-DEOXYURIDINE 5'-MONOPHOSPHATE (DUMP)
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN-9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID, THYMIDYLATE SYNTHASE
Authors:Stout, T.J, Stroud, R.M.
Deposit date:1995-09-19
Release date:1996-01-29
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:The complex of the anti-cancer therapeutic, BW1843U89, with thymidylate synthase at 2.0 A resolution: implications for a new mode of inhibition.
Structure, 4, 1996
2RB0
DownloadVisualize
BU of 2rb0 by Molmil
2,6-difluorobenzylbromide complex with T4 lysozyme L99A
Descriptor: 2-(bromomethyl)-1,3-difluorobenzene, Lysozyme, PHOSPHATE ION
Authors:Graves, A.P, Boyce, S.E, Shoichet, B.K.
Deposit date:2007-09-17
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
J.Mol.Biol., 377, 2008
2R6N
DownloadVisualize
BU of 2r6n by Molmil
Crystal structure of a pyrrolopyrimidine inhibitor in complex with human Cathepsin K
Descriptor: 1-{7-cyclohexyl-6-[4-(4-methylpiperazin-1-yl)benzyl]-7H-pyrrolo[2,3-d]pyrimidin-2-yl}methanamine, Cathepsin K
Authors:Cowan-Jacob, S.W, Ramage, P, Mathis, B, Geisse, S.
Deposit date:2007-09-06
Release date:2007-11-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Novel scaffold for cathepsin K inhibitors.
Bioorg.Med.Chem.Lett., 17, 2007
3P6Z
DownloadVisualize
BU of 3p6z by Molmil
Structural basis of thrombin mediated factor V activation: essential role of the hirudin-like sequence Glu666-Glu672 for processing at the heavy chain-B domain junction
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Corral-Rodriguez, M.A, Bock, P.E, Hernandez-Carvajal, E, Gutierrez-Gallego, R, Fuentes-Prior, P.
Deposit date:2010-10-11
Release date:2011-06-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis of thrombin-mediated factor V activation: the Glu666-Glu672 sequence is critical for processing at the heavy chain-B domain junction.
Blood, 117, 2011
3OVQ
DownloadVisualize
BU of 3ovq by Molmil
Crystal Structure of hRPE and D-Ribulose-5-Phospate Complex
Descriptor: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, FE (II) ION, RIBULOSE-5-PHOSPHATE, ...
Authors:Liang, W.G, Ouyang, S.Y, Shaw, N, Joachimiak, A, Zhang, R.G, Liu, Z.J.
Deposit date:2010-09-17
Release date:2011-03-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Conversion of D-ribulose 5-phosphate to D-xylulose 5-phosphate: new insights from structural and biochemical studies on human RPE
Faseb J., 25, 2011
2OX1
DownloadVisualize
BU of 2ox1 by Molmil
Archaeal Dehydroquinase
Descriptor: 3-dehydroquinate dehydratase, GLYCEROL
Authors:Gallagher, D.T, Smith, N.N.
Deposit date:2007-02-19
Release date:2008-02-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structure and lability of archaeal dehydroquinase.
Acta Crystallogr.,Sect.F, 64, 2008
1XXN
DownloadVisualize
BU of 1xxn by Molmil
Crystal structure of a mesophilic xylanase A from Bacillus subtilis 1A1
Descriptor: Endo-1,4-beta-xylanase A, S,R MESO-TARTARIC ACID
Authors:Murakami, M.T, Ruller, R, Ward, R.J, Arni, R.K.
Deposit date:2004-11-07
Release date:2005-10-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Correlation of temperature induced conformation change with optimum catalytic activity in the recombinant G/11 xylanase A from Bacillus subtilis strain 168 (1A1).
Febs Lett., 579, 2005
1SZM
DownloadVisualize
BU of 1szm by Molmil
DUAL BINDING MODE OF BISINDOLYLMALEIMIDE 2 TO PROTEIN KINASE A (PKA)
Descriptor: 3-(1H-INDOL-3-YL)-4-{1-[2-(1-METHYLPYRROLIDIN-2-YL)ETHYL]-1H-INDOL-3-YL}-1H-PYRROLE-2,5-DIONE, cAMP-dependent protein kinase, alpha-catalytic subunit
Authors:Gassel, M, Breitenlechner, C.B, Koenig, N, Huber, R, Engh, R.A, Bossemeyer, D.
Deposit date:2004-04-06
Release date:2004-06-01
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The protein kinase C inhibitor bisindolyl maleimide 2 binds with reversed orientations to different conformations of protein kinase a.
J.Biol.Chem., 279, 2004
1XL6
DownloadVisualize
BU of 1xl6 by Molmil
Intermediate gating structure 2 of the inwardly rectifying K+ channel KirBac3.1
Descriptor: Inward rectifier potassium channel, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Gulbis, J.M, Kuo, A, Smith, B, Doyle, D.A, Edwards, A, Arrowsmith, C, Sundstrom, M.
Deposit date:2004-09-30
Release date:2004-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Two intermediate gating state crystal structures of the KirBac3.1 K+ channel
To be Published
4KQ7
DownloadVisualize
BU of 4kq7 by Molmil
Crystal structure of a DUF2961 family protein (BACUNI_00161) from Bacteroides uniformis ATCC 8492 at 1.62 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, SODIUM ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-05-14
Release date:2013-07-17
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of a hypothetical protein (BACUNI_00161) from Bacteroides uniformis ATCC 8492 at 1.62 A resolution
To be published
1DZ4
DownloadVisualize
BU of 1dz4 by Molmil
ferric p450cam from pseudomonas putida
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CAMPHOR, CYTOCHROME P450-CAM, ...
Authors:Schlichting, I, Berendzen, J, Chu, K, Stock, A.M, Maves, S.A, Benson, D.E, Sweet, R.M, Ringe, D, Petsko, G.A, Sligar, S.G.
Deposit date:2000-02-16
Release date:2000-07-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Catalytic Pathway of Cytochrome P450Cam at Atomic Resolution
Science, 287, 2000
1XNV
DownloadVisualize
BU of 1xnv by Molmil
Acyl-CoA Carboxylase Beta Subunit from S. coelicolor (PccB), apo form #1
Descriptor: propionyl-CoA carboxylase complex B subunit
Authors:Diacovich, L, Mitchell, D.L, Pham, H, Gago, G, Melgar, M.M, Khosla, C, Gramajo, H, Tsai, S.-C.
Deposit date:2004-10-05
Release date:2004-11-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the beta-Subunit of Acyl-CoA Carboxylase: Structure-Based Engineering of Substrate Specificity
Biochemistry, 43, 2004
3CPA
DownloadVisualize
BU of 3cpa by Molmil
X-RAY CRYSTALLOGRAPHIC INVESTIGATION OF SUBSTRATE BINDING TO CARBOXYPEPTIDASE A AT SUBZERO TEMPERATURE
Descriptor: CARBOXYPEPTIDASE A, GLYCINE, TYROSINE, ...
Authors:Lipscomb, W.N.
Deposit date:1982-03-24
Release date:1982-07-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray crystallographic investigation of substrate binding to carboxypeptidase A at subzero temperature.
Proc.Natl.Acad.Sci.USA, 83, 1986
4K69
DownloadVisualize
BU of 4k69 by Molmil
Crystal Structure of Human Chymase in Complex with Fragment Linked Benzimidazolone Inhibitor: (3S)-3-{3-[(6-bromo-2-oxo-2,3-dihydro-1H-indol-4-yl)methyl]-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl}hexanoic acid
Descriptor: (3S)-3-{3-[(6-bromo-2-oxo-2,3-dihydro-1H-indol-4-yl)methyl]-2-oxo-2,3-dihydro-1H-benzimidazol-1-yl}hexanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Chymase, ...
Authors:Collins, B.K, Padyana, A.K.
Deposit date:2013-04-15
Release date:2013-05-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of Potent, Selective Chymase Inhibitors via Fragment Linking Strategies.
J.Med.Chem., 56, 2013
3S8R
DownloadVisualize
BU of 3s8r by Molmil
Crystal Structures of Glutaryl 7-Aminocephalosporanic Acid Acylase: Insight into Autoproteolytic Activation
Descriptor: GLYCEROL, Glutaryl-7-aminocephalosporanic-acid acylase
Authors:Kim, J.K, Yang, I.S, Park, S.S, Kim, K.H.
Deposit date:2011-05-30
Release date:2011-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of glutaryl 7-aminocephalosporanic acid acylase: insight into autoproteolytic activation.
Biochemistry, 42, 2003
2GTM
DownloadVisualize
BU of 2gtm by Molmil
Mutated Mouse P38 MAP Kinase Domain in complex with Inhibitor PG-892579
Descriptor: 8-(2-CHLOROPHENYLAMINO)-2-(2,6-DIFLUOROPHENYLAMINO)-9-ETHYL-9H-PURINE-1,7-DIIUM, Mitogen-activated protein kinase 14
Authors:Walter, R.L, Mekel, M.J, Evdokimov, A.G, Pokross, M.E, Sabat, M.
Deposit date:2006-04-28
Release date:2006-05-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The development of novel C-2, C-8, and N-9 trisubstituted purines as inhibitors of TNF-alpha production.
Bioorg.Med.Chem.Lett., 16, 2006
3SC4
DownloadVisualize
BU of 3sc4 by Molmil
Crystal structure of a Short chain dehydrogenase (A0QTM2 homolog) Mycobacterium thermoresistibile
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-06-06
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a Short chain dehydrogenase (A0QTM2 homolog) Mycobacterium thermoresistibile
To be Published
4KAP
DownloadVisualize
BU of 4kap by Molmil
The Binding of Benzoarylsulfonamide Ligands to Human Carbonic Anhydrase is Insensitive to Formal Fluorination of the Ligand
Descriptor: 4,5,6,7-tetrafluoro-1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Lange, H, Lockett, M.R, Breiten, B, Heroux, A, Sherman, W, Rappoport, D, Yau, P.O, Snyder, P.W, Whitesides, G.M.
Deposit date:2013-04-22
Release date:2013-07-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The Binding of Benzoarylsulfonamide Ligands to Human Carbonic Anhydrase is Insensitive to Formal Fluorination of the Ligand.
Angew.Chem.Int.Ed.Engl., 52, 2013
1SVK
DownloadVisualize
BU of 1svk by Molmil
Structure of the K180P mutant of Gi alpha subunit bound to AlF4 and GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ...
Authors:Thomas, C.J, Du, X, Li, P, Wang, Y, Ross, E.M, Sprang, S.R.
Deposit date:2004-03-29
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Uncoupling conformational change from GTP hydrolysis in a heterotrimeric G protein {alpha}-subunit.
Proc.Natl.Acad.Sci.USA, 101, 2004
2RJ9
DownloadVisualize
BU of 2rj9 by Molmil
B-specific alpha-1,3-galactosyltransferase (GTB) + UDP+ Amino-deoxy-acceptor
Descriptor: Glycoprotein-fucosylgalactoside alpha-galactosyltransferase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Evans, S.V, Alfaro, J.A.
Deposit date:2007-10-14
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:ABO(H) blood group A and B glycosyltransferases recognize substrate via specific conformational changes.
J.Biol.Chem., 283, 2008
1T60
DownloadVisualize
BU of 1t60 by Molmil
Crystal structure of Type IV collagen NC1 domain from bovine lens capsule
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, POTASSIUM ION, ...
Authors:Vanacore, R.M, Shanmugasundararaj, S, Friedman, D.B, Bondar, O, Hudson, B.G, Sundaramoorthy, M.
Deposit date:2004-05-05
Release date:2004-09-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The alpha1.alpha2 network of collagen IV. Reinforced stabilization of the noncollagenous domain-1 by noncovalent forces and the absence of Met-Lys cross-links
J.Biol.Chem., 279, 2004
1BJR
DownloadVisualize
BU of 1bjr by Molmil
COMPLEX FORMED BETWEEN PROTEOLYTICALLY GENERATED LACTOFERRIN FRAGMENT AND PROTEINASE K
Descriptor: CALCIUM ION, LACTOFERRIN, PROTEINASE K
Authors:Singh, T.P, Sharma, S, Karthikeyan, S, Betzel, C, Bhatia, K.L.
Deposit date:1998-06-27
Release date:1998-11-04
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal structure of a complex formed between proteolytically-generated lactoferrin fragment and proteinase K.
Proteins, 33, 1998

245663

数据于2025-12-03公开中

PDB statisticsPDBj update infoContact PDBjnumon