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7Z9L
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BU of 7z9l by Molmil
Phen-DC3 intercalation causes hybrid-to-antiparallel transformation of human telomeric DNA G-quadruplex
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
Authors:Ghosh, A, Trajkovski, M, Teulade-Fichou, M.P, Gabelica, V, Plavec, J.
Deposit date:2022-03-21
Release date:2022-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Phen-DC 3 Induces Refolding of Human Telomeric DNA into a Chair-Type Antiparallel G-Quadruplex through Ligand Intercalation.
Angew.Chem.Int.Ed.Engl., 61, 2022
2LVJ
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BU of 2lvj by Molmil
solution structure of hemi-Mg-bound Phl p 7
Descriptor: MAGNESIUM ION, Polcalcin Phl p 7
Authors:Henzl, M.T, Tanner, J.J.
Deposit date:2012-07-05
Release date:2012-10-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of polcalcin Phl p 7 in three ligation states: Apo-, hemi-Mg(2+) -bound, and fully Ca(2+) -bound.
Proteins, 81, 2013
3L1Y
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BU of 3l1y by Molmil
Crystal structure of human UBC4 E2 conjugating enzyme
Descriptor: Ubiquitin-conjugating enzyme E2 D2
Authors:Benirschke, R, Thompson, J.R, Mer, G.
Deposit date:2009-12-14
Release date:2010-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular Basis for the Association of Human E4B U Box Ubiquitin Ligase with E2-Conjugating Enzymes UbcH5c and Ubc4.
Structure, 18, 2010
5E22
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BU of 5e22 by Molmil
The second PDZ domain of Ligand of Numb protein X 2 in the presence of an electric field of ~1 MV/cm along the crystallographic x axis, with eightfold extrapolation of structure factor differences.
Descriptor: GLYCEROL, Ligand of Numb protein X 2
Authors:Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
Deposit date:2015-09-30
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
7CT6
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BU of 7ct6 by Molmil
Crystal structure of GCL from Deinococcus metallilatus
Descriptor: Glyoxylate carboligase
Authors:Kim, J.H, Kim, J.S.
Deposit date:2020-08-18
Release date:2021-08-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Glyoxylate carboligase-based whole-cell biotransformation of formaldehyde into ethylene glycol via glycolaldehyde.
Green Chem, 1, 2022
4XV5
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BU of 4xv5 by Molmil
CcP gateless cavity
Descriptor: BENZIMIDAZOLE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
2Y7Y
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BU of 2y7y by Molmil
APLYSIA CALIFORNICA ACHBP IN APO STATE
Descriptor: SOLUBLE ACETYLCHOLINE RECEPTOR
Authors:Ulens, C, Akdemir, A, Jongejan, A, van Elk, R, Bertrand, S, Perrakis, A, Leurs, R, Smit, A.B, Sixma, T.K, Bertrand, D, De Esch, I.J.
Deposit date:2011-02-02
Release date:2011-03-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Use of Acetylcholine Binding Protein in the Search for Novel Alpha7 Nicotinic Receptor Ligands. In Silico Docking, Pharmacological Screening, and X-Ray Analysis.
J.Med.Chem., 52, 2009
4XV7
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BU of 4xv7 by Molmil
CcP gateless cavity
Descriptor: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
3HJO
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BU of 3hjo by Molmil
Crystal Structure of Glutathione Transferase Pi Y108V Mutant in Complex with the Glutathione Conjugate of Ethacrynic Acid
Descriptor: CALCIUM ION, CARBONATE ION, ETHACRYNIC ACID, ...
Authors:Parker, L.J.
Deposit date:2009-05-22
Release date:2009-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Influence of the H-site residue 108 on human glutathione transferase P1-1 ligand binding: structure-thermodynamic relationships and thermal stability.
Protein Sci., 18, 2009
3HJM
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BU of 3hjm by Molmil
Crystal structure of human Glutathione Transferase Pi Y108V mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CARBONATE ION, ...
Authors:Parker, L.J.
Deposit date:2009-05-22
Release date:2009-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Influence of the H-site residue 108 on human glutathione transferase P1-1 ligand binding: structure-thermodynamic relationships and thermal stability.
Protein Sci., 18, 2009
2MOA
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BU of 2moa by Molmil
Solution NMR structure of peptide ImI1 (peak 2)
Descriptor: Alpha-conotoxin ImI
Authors:Heinis, C, Chen, S.
Deposit date:2014-04-24
Release date:2014-09-24
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Dithiol amino acids can structurally shape and enhance the ligand-binding properties of polypeptides.
Nat Chem, 6, 2014
7B7N
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BU of 7b7n by Molmil
Human herpesvirus-8 gH/gL in complex with EphA2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Pederzoli, R, Guardado-Calvo, P, Rey, F.A, Backovic, M.
Deposit date:2020-12-11
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Human herpesvirus 8 molecular mimicry of ephrin ligands facilitates cell entry and triggers EphA2 signaling.
Plos Biol., 19, 2021
4MG6
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BU of 4mg6 by Molmil
Crystal structure of hERa-LBD (Y537S) in complex with benzylbutylphtalate
Descriptor: Estrogen receptor, GLYCEROL, Nuclear receptor coactivator 1, ...
Authors:Delfosse, V, Grimaldi, M, Bourguet, W.
Deposit date:2013-08-28
Release date:2014-09-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional profiling of environmental ligands for estrogen receptors.
Environ.Health Perspect., 122, 2014
4D8D
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BU of 4d8d by Molmil
Crystal structure of HIV-1 NEF Fyn-SH3 R96W variant
Descriptor: GLYCEROL, Protein Nef, Tyrosine-protein kinase Fyn
Authors:Arold, S.T, Hoh, F, Dumas, C.
Deposit date:2012-01-10
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5201 Å)
Cite:Synergy and allostery in ligand binding by HIV-1 Nef.
Biochem.J., 478, 2021
4XV8
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BU of 4xv8 by Molmil
CcP gateless cavity
Descriptor: BENZAMIDINE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
6EU5
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BU of 6eu5 by Molmil
Leishmania major N-myristoyltransferase with bound myristoyl-CoA and inhibitor
Descriptor: 4-[3-[(8~{a}~{R})-3,4,6,7,8,8~{a}-hexahydro-1~{H}-pyrrolo[1,2-a]pyrazin-2-yl]propyl]-2,6-bis(chloranyl)-~{N}-methyl-~{N}-(1,3,5-trimethylpyrazol-4-yl)benzenesulfonamide, Glycylpeptide N-tetradecanoyltransferase, TETRADECANOYL-COA
Authors:Brenk, R, Kehrein, J, Kersten, C.
Deposit date:2017-10-27
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.496083 Å)
Cite:How To Design Selective Ligands for Highly Conserved Binding Sites: A Case Study UsingN-Myristoyltransferases as a Model System.
J.Med.Chem., 2019
2LVI
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BU of 2lvi by Molmil
Solution structure of apo-Phl p 7
Descriptor: Polcalcin Phl p 7
Authors:Henzl, M.T, Tanner, J.J.
Deposit date:2012-07-05
Release date:2012-10-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of polcalcin Phl p 7 in three ligation states: Apo-, hemi-Mg(2+) -bound, and fully Ca(2+) -bound.
Proteins, 81, 2013
6EWF
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BU of 6ewf by Molmil
Leishmania major N-myristoyltransferase with bound myristoyl-CoA and inhibitor
Descriptor: Glycylpeptide N-tetradecanoyltransferase, N-[2-(3-methoxyphenyl)ethanimidoyl]-2-piperidin-4-yloxy-benzamide, TETRADECANOYL-COA
Authors:Brenk, R, Kehrein, J, Kersten, C.
Deposit date:2017-11-03
Release date:2019-02-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5351733 Å)
Cite:How To Design Selective Ligands for Highly Conserved Binding Sites: A Case Study UsingN-Myristoyltransferases as a Model System.
J.Med.Chem., 2019
4XV6
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BU of 4xv6 by Molmil
CcP gateless cavity
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
3R1H
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BU of 3r1h by Molmil
Crystal structure of the Class I ligase ribozyme-substrate preligation complex, C47U mutant, Ca2+ bound
Descriptor: 5'-R(*UP*CP*CP*AP*GP*UP*A)-3', CALCIUM ION, Class I ligase ribozyme, ...
Authors:Shechner, D.M, Bartel, D.P.
Deposit date:2011-03-10
Release date:2011-08-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:The structural basis of RNA-catalyzed RNA polymerization.
Nat.Struct.Mol.Biol., 18, 2011
2LVK
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BU of 2lvk by Molmil
Solution structure of Ca-bound Phl p 7
Descriptor: CALCIUM ION, Polcalcin Phl p 7
Authors:Henzl, M.T, Sirianni, A.G, Tanner, J.J.
Deposit date:2012-07-05
Release date:2012-10-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of polcalcin Phl p 7 in three ligation states: Apo-, hemi-Mg(2+) -bound, and fully Ca(2+) -bound.
Proteins, 81, 2013
4XVA
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BU of 4xva by Molmil
Crystal structure of wild type cytochrome c peroxidase
Descriptor: BENZIMIDAZOLE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015
4MGC
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BU of 4mgc by Molmil
Crystal structure of hERa-LBD (Y537S) in complex with benzophenone-2
Descriptor: Estrogen receptor, GLYCEROL, Nuclear receptor coactivator 1, ...
Authors:Delfosse, V, Grimaldi, M, Bourguet, W.
Deposit date:2013-08-28
Release date:2014-09-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and functional profiling of environmental ligands for estrogen receptors.
Environ.Health Perspect., 122, 2014
4MGA
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BU of 4mga by Molmil
Crystal structure of hERa-LBD (Y537S) in complex with 4-tert-octylphenol
Descriptor: 4-(2,4,4-trimethylpentan-2-yl)phenol, Estrogen receptor, Nuclear receptor coactivator 1
Authors:Delfosse, V, Grimaldi, M, Bourguet, W.
Deposit date:2013-08-28
Release date:2014-09-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional profiling of environmental ligands for estrogen receptors.
Environ.Health Perspect., 122, 2014
4XV4
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BU of 4xv4 by Molmil
CcP gateless cavity
Descriptor: 2-AMINO-5-METHYLTHIAZOLE, Cytochrome c peroxidase, mitochondrial, ...
Authors:Fischer, M, Fraser, J.S.
Deposit date:2015-01-26
Release date:2015-02-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites.
Chembiochem, 16, 2015

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数据于2024-09-04公开中

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