PDB: 66478 resultsInfo pagesStatus searchChemie searchBIRD

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8PN7	Engineered glycolyl-CoA carboxylase (G20R variant) with bound CoA Descriptor: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, COENZYME A, Propionyl-CoA carboxylase alpha subunit, ... Authors: Zarzycki, J, Marchal, D.G, Schulz, L, Prinz, S, Erb, T.J. Deposit date: 2023-06-30 Release date: 2023-11-29 Last modified: 2023-12-27 Method: ELECTRON MICROSCOPY (2.03 Å) Cite: Machine Learning-Supported Enzyme Engineering toward Improved CO 2 -Fixation of Glycolyl-CoA Carboxylase. Acs Synth Biol, 12, 2023
5N4E	Prolyl oligopeptidase B from Galerina marginata bound to 35mer hydrolysis and macrocyclization substrate - H698A mutant Descriptor: Alpha-amanitin proprotein, GLYCEROL, Prolyl oligopeptidase Authors: Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H. Deposit date: 2017-02-10 Release date: 2017-11-01 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates. Nat Commun, 8, 2017
8OZ5	Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with substrate analog/inhibitor, 2-CN-benzoyl-CoA Descriptor: 2-CN-benzoyl coenzyme A, CALCIUM ION, FE (III) ION, ... Authors: Kayastha, K, Ermler, U. Deposit date: 2023-05-08 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.04 Å) Cite: Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with substrate analog/inhibitor, 2-CN-benzoyl-CoA To Be Published
8P02	Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with product, benzoyl-CoA Descriptor: CALCIUM ION, FE (III) ION, POTASSIUM ION, ... Authors: Kayastha, K, Ermler, U. Deposit date: 2023-05-09 Release date: 2024-06-05 Method: ELECTRON MICROSCOPY (2.3 Å) Cite: Cryo-EM structure of Phthaloyl-CoA decarboxylase (Pcd) bound with product, benzoyl-CoA To Be Published
5N0W	Crystal structure of OphA-DeltaC6 mutant R72A in complex with SAM Descriptor: GLYCEROL, Peptide N-methyltransferase, S-ADENOSYLMETHIONINE Authors: Song, H, Naismith, J.H. Deposit date: 2017-02-03 Release date: 2018-02-14 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.93 Å) Cite: A molecular mechanism for the enzymatic methylation of nitrogen atoms within peptide bonds. Sci Adv, 4, 2018
5N27	X-ray structure of human heavy chain ferritin (apo form) Descriptor: CHLORIDE ION, Ferritin heavy chain, MAGNESIUM ION Authors: Ferraro, G, Merlino, A. Deposit date: 2017-02-07 Release date: 2017-08-02 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Cisplatin Binding Sites in Human H-Chain Ferritin. Inorg Chem, 56, 2017
5NJ1	The X-ray structure of the adduct formed in the reaction between hen egg white lysozyme and arsenoplatin-1 Descriptor: 1,2-ETHANEDIOL, Lysozyme C, NITRATE ION, ... Authors: Ferraro, G, Merlino, A. Deposit date: 2017-03-27 Release date: 2018-05-16 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Arsenoplatin-1 Is a Dual Pharmacophore Anticancer Agent. J.Am.Chem.Soc., 141, 2019
8R8R	Cryo-EM structure of the human mPSF with PAPOA C-terminus peptide (PAPOAc) Descriptor: Cleavage and polyadenylation specificity factor subunit 1, Cleavage and polyadenylation specificity factor subunit 4, RNA (5'-R(P*AP*AP*UP*AP*AP*A)-3'), ... Authors: Todesca, S, Sandmeir, F, Keidel, A, Conti, E. Deposit date: 2023-11-29 Release date: 2024-04-10 Last modified: 2024-06-26 Method: ELECTRON MICROSCOPY (2.79 Å) Cite: Molecular basis of human poly(A) polymerase recruitment by mPSF. Rna, 30, 2024
8R33	CryoEM structure of the symmetric Pho90 dimer from yeast without substrates. Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, PHO90 isoform 1 Authors: Schneider, S, Kuehlbrandt, W, Yildiz, O. Deposit date: 2023-11-08 Release date: 2024-04-24 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (2.29 Å) Cite: Complementary structures of the yeast phosphate transporter Pho90 provide insights into its transport mechanism. Structure, 32, 2024
8R34	CryoEM structure of the symmetric Pho90 dimer from yeast with substrates. Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, Low-affinity phosphate transporter PHO90, PHOSPHATE ION, ... Authors: Schneider, S, Kuehlbrandt, W, Yildiz, O. Deposit date: 2023-11-08 Release date: 2024-04-24 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (2.62 Å) Cite: Complementary structures of the yeast phosphate transporter Pho90 provide insights into its transport mechanism. Structure, 32, 2024
8R35	CryoEM structure of the asymmetric Pho90 dimer from yeast without substrates. Descriptor: Low-affinity phosphate transporter PHO90 Authors: Schneider, S, Kuehlbrandt, W, Yildiz, O. Deposit date: 2023-11-08 Release date: 2024-04-24 Last modified: 2024-07-24 Method: ELECTRON MICROSCOPY (3.12 Å) Cite: Complementary structures of the yeast phosphate transporter Pho90 provide insights into its transport mechanism. Structure, 32, 2024
8PK8	Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on ISCU2) Descriptor: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ... Authors: Steinhilper, R, Murphy, B.J. Deposit date: 2023-06-26 Release date: 2024-05-01 Method: ELECTRON MICROSCOPY (2.49 Å) Cite: Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2. Nat Commun, 15, 2024
8Q5X	MgADP-bound Fe protein of the molybdenum nitrogenase from Methanococcus maripaludis Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ... Authors: Maslac, N, Wagner, T. Deposit date: 2023-08-09 Release date: 2024-05-15 Last modified: 2024-08-14 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales. Febs J., 291, 2024
8PKA	Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (without frataxin) Descriptor: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ... Authors: Steinhilper, R, Murphy, B.J. Deposit date: 2023-06-26 Release date: 2024-05-01 Method: ELECTRON MICROSCOPY (2.75 Å) Cite: Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2. Nat Commun, 15, 2024
8QBN	Structure of the non-canonical CTLH E3 substrate receptor WDR26 bound to YPEL5 Descriptor: Protein yippee-like 5, WD repeat-containing protein 26, ZINC ION Authors: Chrustowicz, J, Sherpa, D, Schulman, B.A. Deposit date: 2023-08-24 Release date: 2024-05-15 Last modified: 2024-07-03 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Non-canonical substrate recognition by the human WDR26-CTLH E3 ligase regulates prodrug metabolism. Mol.Cell, 84, 2024
8Q5V	MgADP-bound Fe protein of the molybdenum nitrogenase from Methanothermococcus thermolithotrophicus Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ... Authors: Maslac, N, Wagner, T. Deposit date: 2023-08-09 Release date: 2024-05-15 Last modified: 2024-08-14 Method: X-RAY DIFFRACTION (2.74 Å) Cite: Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales. Febs J., 291, 2024
8PK9	Structure of the human mitochondrial iron-sulfur cluster biosynthesis complex during persulfide transfer (persulfide on NFS1 and ISCU2) Descriptor: Acyl carrier protein, Cysteine desulfurase, FE (II) ION, ... Authors: Steinhilper, R, Murphy, B.J. Deposit date: 2023-06-26 Release date: 2024-05-01 Method: ELECTRON MICROSCOPY (2.58 Å) Cite: Mechanism and structural dynamics of sulfur transfer during de novo [2Fe-2S] cluster assembly on ISCU2. Nat Commun, 15, 2024
8Q50	Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, tetragonal crystalline form at 1.91-A resolution Descriptor: ACETATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ... Authors: Maslac, N, Wagner, T. Deposit date: 2023-08-07 Release date: 2024-05-15 Last modified: 2024-08-14 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales. Febs J., 291, 2024
8Q5T	Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, monoclinic crystalline form at 2.31-A resolution Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Nitrogenase iron protein 1 Authors: Maslac, N, Wagner, T. Deposit date: 2023-08-09 Release date: 2024-05-15 Last modified: 2024-08-14 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales. Febs J., 291, 2024
8R8F	Ensemble-refined carboxymyoglobin photolysis power titration, 6 mJ/cm2 Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T, Schlichting, I. Deposit date: 2023-11-29 Release date: 2024-01-31 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature, 626, 2024
8R90	Multicopy-refined carboxymyoglobin photolysis time series at 5 mJ/cm2 laser fluence, 604 fs time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T, Schlichting, I. Deposit date: 2023-11-30 Release date: 2024-01-31 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature, 626, 2024
8R9H	Multicopy-refined carboxymyoglobin photolysis time series at 23 mJ/cm2 laser fluence, 661 fs time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T, Schlichting, I. Deposit date: 2023-11-30 Release date: 2024-01-31 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature, 626, 2024
8RA3	Multicopy-refined carboxymyoglobin photolysis time series at 101 mJ/cm2 laser fluence, 462 fs time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T, Schlichting, I. Deposit date: 2023-12-01 Release date: 2024-01-31 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature, 626, 2024
8R94	Multicopy-refined carboxymyoglobin photolysis time series at 5 mJ/cm2 laser fluence, 1001 fs time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T, Schlichting, I. Deposit date: 2023-11-30 Release date: 2024-01-31 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature, 626, 2024
8R9L	Multicopy-refined carboxymyoglobin photolysis time series at 23 mJ/cm2 laser fluence, 1036 fs time delay Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Barends, T, Schlichting, I. Deposit date: 2023-11-30 Release date: 2024-01-31 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Influence of pump laser fluence on ultrafast myoglobin structural dynamics. Nature, 626, 2024

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