PDB: 72308 resultsInfo pagesStatus searchChemie searchBIRD

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7AOC	Schizosaccharomyces pombe RNA polymerase I (monomer) Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit rpa1, DNA-directed RNA polymerase I subunit rpa14, ... Authors: Heiss, F, Daiss, J, Becker, P, Engel, C. Deposit date: 2020-10-14 Release date: 2021-02-24 Method: ELECTRON MICROSCOPY (3.84 Å) Cite: Conserved strategies of RNA polymerase I hibernation and activation. Nat Commun, 12, 2021
7AOD	Schizosaccharomyces pombe RNA polymerase I (dimer) Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit rpa1, DNA-directed RNA polymerase I subunit rpa14, ... Authors: Heiss, F, Daiss, J, Becker, P, Engel, C. Deposit date: 2020-10-14 Release date: 2021-02-24 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Conserved strategies of RNA polymerase I hibernation and activation. Nat Commun, 12, 2021
1BRG	CRYSTALLOGRAPHIC ANALYSIS OF PHE->LEU SUBSTITUTION IN THE HYDROPHOBIC CORE OF BARNASE Descriptor: BARNASE, ZINC ION Authors: Chen, Y.W, Fersht, A.R, Henrick, K. Deposit date: 1994-03-30 Release date: 1994-06-22 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystallographic analysis of Phe-->Leu substitution in the hydrophobic core of barnase. Acta Crystallogr.,Sect.D, 51, 1995
8I4I	The asymmetric structure of homodimeric E. coli TrpRS bound with tryptophanyl adenylate and L-tryptophan Descriptor: SULFATE ION, TRYPTOPHAN, TRYPTOPHANYL-5'AMP, ... Authors: Xiang, M, Zhou, H. Deposit date: 2023-01-19 Release date: 2023-04-12 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.2 Å) Cite: An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening. Nucleic Acids Res., 51, 2023
8I1Y	The structure of E. coli TrpRS bound with a chemical fragment Descriptor: 5-ethanoylthiophene-2-carbonitrile, SULFATE ION, TRYPTOPHANYL-5'AMP, ... Authors: Xiang, M, Zhou, H. Deposit date: 2023-01-13 Release date: 2023-04-12 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.78 Å) Cite: An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening. Nucleic Acids Res., 51, 2023
8I1W	The asymmetric structure of homodimeric E. coli TrpRS bound with tryptophanyl adenylate at one of its two active pockets Descriptor: SULFATE ION, TRYPTOPHANYL-5'AMP, Tryptophan--tRNA ligase Authors: Xiang, M, Zhou, H. Deposit date: 2023-01-13 Release date: 2023-04-12 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.8 Å) Cite: An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening. Nucleic Acids Res., 51, 2023
6PK9	Solution Structure of lncRNA (LINK-A) 20-nt Hexaloop Hairpin Descriptor: RNA (5'-R(*GP*GP*AP*GP*GP*GP*UP*AP*GP*AP*CP*UP*CP*GP*CP*UP*CP*UP*CP*C)-3') Authors: Amado, A.Y, Walker, M, Varani, G. Deposit date: 2019-06-28 Release date: 2020-07-01 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure of the lncRNA LINK-A Hexaloop Hairpin in PI(3,4,5)P3 Interaction To Be Published
6N6C	Vibrio cholerae Oligoribonuclease bound to pAA Descriptor: RNA (5'-R(P*AP*A)-3'), RNA exonuclease 2 homolog,Small fragment nuclease, SODIUM ION Authors: Lormand, J.D, Sondermann, H. Deposit date: 2018-11-26 Release date: 2019-06-12 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.619 Å) Cite: A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation. Elife, 8, 2019
6N6E	Vibrio cholerae Oligoribonuclease bound to pGA Descriptor: RNA (5'-R(P*GP*A)-3'), RNA exonuclease 2 homolog,Small fragment nuclease, SODIUM ION Authors: Lormand, J.D, Sondermann, H. Deposit date: 2018-11-26 Release date: 2019-06-12 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.578 Å) Cite: A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation. Elife, 8, 2019
1M0F	Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy Descriptor: Capsid Protein F, Major Spike Protein G, Scaffolding Protein B, ... Authors: Bernal, R.A, Hafenstein, S, Olson, N.H, Bowman, V.D, Chipman, P.R, Baker, T.S, Fane, B.A, Rossmann, M.G. Deposit date: 2002-06-12 Release date: 2002-12-25 Last modified: 2024-04-17 Method: ELECTRON MICROSCOPY (16 Å) Cite: Structural Studies of Bacteriophage alpha3 Assembly J.Mol.Biol., 325, 2003
5MWI	Crystal structure of G(CUG)8G duplex Descriptor: RNA G(CUG)8C duplex, SULFATE ION Authors: Kiliszek, A, Blaszczyk, L, Rypniewski, W. Deposit date: 2017-01-18 Release date: 2017-03-08 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Stabilization of RNA hairpins using non-nucleotide linkers and circularization. Nucleic Acids Res., 45, 2017
8BD6	Cas12k-sgRNA-dsDNA-TnsC non-productive complex. Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cas12k, DNA, ... Authors: Schmitz, M, Querques, I, Oberli, S, Chanez, C, Jinek, M. Deposit date: 2022-10-18 Release date: 2022-12-28 Last modified: 2023-07-26 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Structural basis for the assembly of the type V CRISPR-associated transposon complex. Cell, 185, 2022
8I9I	Glutamyl-tRNA synthetase from Escherichia Coli bound to Glutamate and Zinc Descriptor: GLUTAMIC ACID, Glutamate--tRNA ligase, ZINC ION Authors: Dev, A, Chongdar, N, Dasgupta, S, Basu, G. Deposit date: 2023-02-07 Release date: 2023-04-19 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Escherichia coli GluRS To Be Published
7V59	Cryo-EM structure of spyCas9-sgRNA-DNA dimer Descriptor: CRISPR-associated endonuclease Cas9/Csn1, DNA (49-MER), RNA (115-MER) Authors: Liu, J, Deng, P. Deposit date: 2021-08-16 Release date: 2022-08-17 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (5.26 Å) Cite: Nonspecific interactions between SpCas9 and dsDNA sites located downstream of the PAM mediate facilitated diffusion to accelerate target search. Chem Sci, 12, 2021
2VRT	Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain Descriptor: 5'-R(*UP*UP)-3', 5'-R(*UP*UP*GP)-3', RIBONUCLEASE E, ... Authors: Koslover, D.J, Callaghan, A.J, Marcaida, M.J, Garman, E.F, Martick, M, Scott, W.G, Luisi, B.F. Deposit date: 2008-04-14 Release date: 2008-07-22 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (3.5 Å) Cite: The Crystal Structure of the Escherichia Coli Rnase E Apoprotein and a Mechanism for RNA Degradation. Structure, 16, 2008
7YYN	Mammalian Dicer in the dicing state with pre-miR-15a substrate Descriptor: 59-nt precursor of miR-15a, Isoform 2 of Endoribonuclease Dicer Authors: Zanova, M, Zapletal, D, Kubicek, K, Stefl, R, Pinkas, M, Novacek, J. Deposit date: 2022-02-18 Release date: 2022-11-16 Method: ELECTRON MICROSCOPY (6.21 Å) Cite: Structural and functional basis of mammalian microRNA biogenesis by Dicer. Mol.Cell, 82, 2022
6EXZ	Crystal structure of Mex67 C-term Descriptor: FORMIC ACID, mRNA export factor MEX67 Authors: Mohamad, N, Bravo, J. Deposit date: 2017-11-10 Release date: 2018-11-21 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Mip6 binds directly to the Mex67 UBA domain to maintain low levels of Msn2/4 stress-dependent mRNAs. Embo Rep., 2019
1C2P	HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE Descriptor: RNA-DEPENDENT RNA POLYMERASE Authors: Lesburg, C.A, Cable, M.B, Ferrari, E, Hong, Z, Mannarino, A.F, Weber, P.C. Deposit date: 1999-07-26 Release date: 2000-04-05 Last modified: 2018-01-31 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of the RNA-dependent RNA polymerase from hepatitis C virus reveals a fully encircled active site. Nat.Struct.Biol., 6, 1999
4YE6	The crystal structure of the intact human GlnRS Descriptor: Glutamine--tRNA ligase Authors: Ognjenovic, J, Wu, J, Ling, J, Simonovic, M. Deposit date: 2015-02-23 Release date: 2016-02-17 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The crystal structure of human GlnRS provides basis for the development of neurological disorders. Nucleic Acids Res., 44, 2016
4YE9	The crystal structure of the G45V mutant of human GlnRS Descriptor: Glutamine--tRNA ligase Authors: Ognjenovic, J, Wu, J, Ling, J, Simonovic, M. Deposit date: 2015-02-23 Release date: 2016-02-17 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.7 Å) Cite: The crystal structure of human GlnRS provides basis for the development of neurological disorders. Nucleic Acids Res., 44, 2016
4YE8	The crystal structure of the Y57H mutant of human GlnRS Descriptor: Glutamine--tRNA ligase Authors: Ognjenovic, J, Wu, J, Ling, J, Simonovic, M. Deposit date: 2015-02-23 Release date: 2016-02-17 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.3 Å) Cite: The crystal structure of human GlnRS provides basis for the development of neurological disorders. Nucleic Acids Res., 44, 2016
1L9K	dengue methyltransferase Descriptor: RNA-DIRECTED RNA POLYMERASE, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION Authors: Egloff, M.P, Benarroch, D, Selisko, B, Romette, J.L, Canard, B. Deposit date: 2002-03-25 Release date: 2003-03-25 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.4 Å) Cite: An RNA cap (nucleoside-2'-O-) methyltransferase in the flavivirus RNA polymerase NS5: crystal structure and functional characterization Embo J., 21, 2002
8JHP	Another hairpin structure found in the RNA element involved in piRNA biogenesis Descriptor: RNA (27-MER) Authors: Takase, N, Kawai, G. Deposit date: 2023-05-25 Release date: 2024-05-29 Method: SOLUTION NMR Cite: Another hairpin structure found in the RNA element involved in piRNA biogenesis To Be Published
1TWG	RNA polymerase II complexed with CTP Descriptor: CYTIDINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, ... Authors: Westover, K.D, Bushnell, D.A, Kornberg, R.D. Deposit date: 2004-06-30 Release date: 2004-11-16 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004
1TWH	RNA polymerase II complexed with 2'dATP Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 14.2 kDa polypeptide, ... Authors: Westover, K.D, Bushnell, D.A, Kornberg, R.D. Deposit date: 2004-06-30 Release date: 2004-11-16 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center. Cell(Cambridge,Mass.), 119, 2004

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