2VRT

Crystal Structure of E. coli RNase E possessing M1 RNA fragments - Catalytic Domain

Summary for 2VRT

Related2BX2 2C0B 2VMK 2C4R 1SLJ 1SN8 2FYM 1SMX
DescriptorRIBONUCLEASE E, 5'-R(*UP*UP)-3', 5'-R(*UP*UP*GP)-3', ... (4 entities in total)
Functional Keywordsrna processing, m1 rna, rnase p, nuclease, hydrolase, cytoplasm, rna-binding, rna turnover, endonuclease
Biological sourceESCHERICHIA COLI
Cellular locationCytoplasm P21513
Total number of polymer chains8
Total molecular weight232210.9
Authors
Koslover, D.J.,Callaghan, A.J.,Marcaida, M.J.,Garman, E.F.,Martick, M.,Scott, W.G.,Luisi, B.F. (deposition date: 2008-04-14, release date: 2008-07-22, Last modification date: 2011-07-13)
Primary citation
Koslover, D.J.,Callaghan, A.J.,Marcaida, M.J.,Garman, E.F.,Martick, M.,Scott, W.G.,Luisi, B.F.
The Crystal Structure of the Escherichia Coli Rnase E Apoprotein and a Mechanism for RNA Degradation.
Structure, 16:1238-, 2008
PubMed: 18682225 (PDB entries with the same primary citation)
DOI: 10.1016/J.STR.2008.04.017
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (3.5 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliersRNA backbone0.323250.4%1.3%2.4%0.33MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2vrt
no rotation
Molmil generated image of 2vrt
rotated about x axis by 90°
Molmil generated image of 2vrt
rotated about y axis by 90°