Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4V6E
DownloadVisualize
BU of 4v6e by Molmil
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhang, W, Dunkle, J.A, Cate, J.H.D.
Deposit date:2009-06-28
Release date:2014-07-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.712 Å)
Cite:Structures of the ribosome in intermediate States of ratcheting.
Science, 325, 2009
2J3R
DownloadVisualize
BU of 2j3r by Molmil
The crystal structure of the bet3-trs31 heterodimer.
Descriptor: NITRATE ION, PALMITIC ACID, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3, ...
Authors:Kim, Y.-G, Oh, B.-H.
Deposit date:2006-08-23
Release date:2006-11-27
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Architecture of the Multisubunit Trapp I Complex Suggests a Model for Vesicle Tethering.
Cell(Cambridge,Mass.), 127, 2006
4ICC
DownloadVisualize
BU of 4icc by Molmil
Crystal structure of human AKR1B10 complexed with NADP+ and JF0064
Descriptor: 2,2',3,3',5,5',6,6'-octafluorobiphenyl-4,4'-diol, Aldo-keto reductase family 1 member B10, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Cousido-Siah, A, Ruiz, F.X, Mitschler, A, Porte, S, de Lera, A.R, Martin, M.J, de la Fuente, J.A, Klebe, G, Farres, J, Pares, X, Podjarny, A.
Deposit date:2012-12-10
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.752 Å)
Cite:Identification of a novel polyfluorinated compound as a lead to inhibit the human enzymes aldose reductase and AKR1B10: structure determination of both ternary complexes and implications for drug design.
Acta Crystallogr.,Sect.D, 70, 2014
6TRC
DownloadVisualize
BU of 6trc by Molmil
Cryo- EM structure of the Thermosynechococcus elongatus photosystem I in the presence of cytochrome c6
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
Authors:Koelsch, A, Radon, C, Baumert, A, Buerger, J, Mielke, T, Lisdat, F, Zouni, A, Wendler, P.
Deposit date:2019-12-18
Release date:2020-09-16
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Current limits of structural biology: The transient interaction between cytochrome c6 and photosystem I
Curr.Opin.Struct.Biol., 2, 2020
2YV5
DownloadVisualize
BU of 2yv5 by Molmil
Crystal structure of Yjeq from Aquifex aeolicus
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, YjeQ protein, ...
Authors:Wang, H, Kaminishi, T, Hanawa-Suetsugu, K, Takemoto, C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-09
Release date:2008-04-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of YjeQ from Aquifex aeolicus
To be Published
8WL2
DownloadVisualize
BU of 8wl2 by Molmil
Cryo-EM structure of the membrane-anchored part of the flagellar motor-hook complex in the CW state.
Descriptor: Flagellar L-ring protein, Flagellar M-ring protein, Flagellar P-ring protein, ...
Authors:Tan, J.X, Zhang, L, Zhou, Y, Zhu, Y.Q.
Deposit date:2023-09-29
Release date:2024-09-04
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of the bacterial flagellar motor rotational switching.
Cell Res., 34, 2024
8WO5
DownloadVisualize
BU of 8wo5 by Molmil
Cryo-EM structure of the intact flagellar motor-hook complex in the CCW state
Descriptor: Flagellar L-ring protein, Flagellar M-ring protein, Flagellar P-ring protein, ...
Authors:Tan, J.X, Zhang, L, Zhou, Y, Zhu, Y.Q.
Deposit date:2023-10-06
Release date:2024-09-04
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Structural basis of the bacterial flagellar motor rotational switching.
Cell Res., 34, 2024
8WLT
DownloadVisualize
BU of 8wlt by Molmil
Cryo-EM structure of the membrane-anchored part of the flagellar motor-hook complex in the CCW state
Descriptor: Flagellar L-ring protein, Flagellar M-ring protein, Flagellar P-ring protein, ...
Authors:Tan, J.X, Zhang, L, Zhou, Y, Zhu, Y.Q.
Deposit date:2023-10-01
Release date:2024-09-04
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis of the bacterial flagellar motor rotational switching.
Cell Res., 34, 2024
8WOE
DownloadVisualize
BU of 8woe by Molmil
Cryo-EM structure of the intact flagellar motor-hook complex in the CW state
Descriptor: Chemotaxis protein CheY, Flagellar L-ring protein, Flagellar M-ring protein, ...
Authors:Tan, J.X, Zhang, L, Zhou, Y, Zhu, Y.Q.
Deposit date:2023-10-07
Release date:2024-09-04
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis of the bacterial flagellar motor rotational switching.
Cell Res., 34, 2024
8WIW
DownloadVisualize
BU of 8wiw by Molmil
Cryo-EM structure of the flagellar C ring in the CW state
Descriptor: Chemotaxis protein CheY, Flagellar M-ring protein, Flagellar motor switch protein FliG, ...
Authors:Tan, J.X, Zhang, L, Zhou, Y, Zhu, Y.Q.
Deposit date:2023-09-25
Release date:2024-09-04
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Structural basis of the bacterial flagellar motor rotational switching.
Cell Res., 34, 2024
7RQ8
DownloadVisualize
BU of 7rq8 by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Mitcheltree, M.J, Pisipati, A, Syroegin, E.A, Silvestre, K.J, Klepacki, D, Mason, J.D, Terwilliger, D.W, Testolin, G, Pote, A.R, Wu, K.J.Y, Ladley, R.P, Chatman, K, Mankin, A.S, Polikanov, Y.S, Myers, A.G.
Deposit date:2021-08-06
Release date:2021-10-13
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A synthetic antibiotic class overcoming bacterial multidrug resistance.
Nature, 599, 2021
7RQ9
DownloadVisualize
BU of 7rq9 by Molmil
Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Mitcheltree, M.J, Pisipati, A, Syroegin, E.A, Silvestre, K.J, Klepacki, D, Mason, J.D, Terwilliger, D.W, Testolin, G, Pote, A.R, Wu, K.J.Y, Ladley, R.P, Chatman, K, Mankin, A.S, Polikanov, Y.S, Myers, A.G.
Deposit date:2021-08-06
Release date:2021-10-13
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A synthetic antibiotic class overcoming bacterial multidrug resistance.
Nature, 599, 2021
7RRO
DownloadVisualize
BU of 7rro by Molmil
Structure of the 48-nm repeat doublet microtubule from bovine tracheal cilia
Descriptor: Armadillo repeat containing 4, Chromosome 3 C1orf194 homolog, Cilia and flagella associated protein 161, ...
Authors:Gui, M, Anderson, J.R, Botsch, J.J, Meleppattu, S, Singh, S.K, Zhang, Q, Brown, A.
Deposit date:2021-08-10
Release date:2021-10-27
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:De novo identification of mammalian ciliary motility proteins using cryo-EM.
Cell, 184, 2021
7S3D
DownloadVisualize
BU of 7s3d by Molmil
Structure of photosystem I with bound ferredoxin from Synechococcus sp. PCC 7335 acclimated to far-red light
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2Fe-2S ferredoxin-type domain-containing protein, ...
Authors:Gisriel, C.J, Flesher, D.A, Shen, G, Wang, J, Ho, M, Brudvig, G.W, Bryant, D.A.
Deposit date:2021-09-05
Release date:2021-11-24
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structure of a photosystem I-ferredoxin complex from a marine cyanobacterium provides insights into far-red light photoacclimation.
J.Biol.Chem., 298, 2021
7RQD
DownloadVisualize
BU of 7rqd by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Syroegin, E.A, Flemmich, L, Klepacki, D, Vazquez-Laslop, N, Micura, R, Polikanov, Y.S.
Deposit date:2021-08-06
Release date:2022-01-26
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the context-specific action of the classic peptidyl transferase inhibitor chloramphenicol.
Nat.Struct.Mol.Biol., 29, 2022
6POJ
DownloadVisualize
BU of 6poj by Molmil
STRUCTURAL REFINEMENT OF AQUAPORIN 1 VIA SSNMR
Descriptor: Aquaporin-1
Authors:Dingwell, D.A, Brown, L.S, Ladizhansky, V.
Deposit date:2019-07-04
Release date:2019-10-02
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Structure of the Functionally Important Extracellular Loop C of Human Aquaporin 1 Obtained by Solid-State NMR under Nearly Physiological Conditions.
J.Phys.Chem.B, 123, 2019
6OLA
DownloadVisualize
BU of 6ola by Molmil
Structure of the PCV2d virus-like particle
Descriptor: Capsid protein, DNA (5'-D(P*CP*CP*GP*G)-3')
Authors:Khayat, R, Wen, K, Alimova, A, Galarza, J, Gottlieb, P.
Deposit date:2019-04-16
Release date:2019-09-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural characterization of the PCV2d virus-like particle at 3.3 angstrom resolution reveals differences to PCV2a and PCV2b capsids, a tetranucleotide, and an N-terminus near the icosahedral 3-fold axes.
Virology, 537, 2019
4WZ7
DownloadVisualize
BU of 4wz7 by Molmil
Crystal structure of mitochondrial NADH:ubiquinone oxidoreductase from Yarrowia lipolytica.
Descriptor: 39-kDa subunit, FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Wirth, C, Zickermann, V, Brandt, U, Hunte, C.
Deposit date:2014-11-18
Release date:2015-03-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural biology. Mechanistic insight from the crystal structure of mitochondrial complex I.
Science, 347, 2015
8YJT
DownloadVisualize
BU of 8yjt by Molmil
Cryo-EM structure of the flagellar C ring in the CCW state
Descriptor: Flagellar M-ring protein, Flagellar motor switch protein FliG, Flagellar motor switch protein FliM, ...
Authors:Tan, J.X, Zhang, L, Zhou, Y, Zhu, Y.Q.
Deposit date:2024-03-02
Release date:2024-09-04
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:Structural basis of the bacterial flagellar motor rotational switching.
Cell Res., 34, 2024
6ONY
DownloadVisualize
BU of 6ony by Molmil
BRD2_Bromodomain1 complex with inhibitor 744
Descriptor: 1,2-ETHANEDIOL, Bromodomain-containing protein 2, N-ethyl-4-[2-(4-fluoro-2,6-dimethylphenoxy)-5-(2-hydroxypropan-2-yl)phenyl]-6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide
Authors:Longenecker, K.L, Bigelow, L.
Deposit date:2019-04-22
Release date:2020-01-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Selective inhibition of the BD2 bromodomain of BET proteins in prostate cancer.
Nature, 578, 2020
8XJV
DownloadVisualize
BU of 8xjv by Molmil
Structural basis for the linker histone H5-nucleosome binding and chromatin compaction
Descriptor: DNA, Histone H2A, Histone H2B 1.1, ...
Authors:Li, W.Y, Song, F, Zhu, P.
Deposit date:2023-12-22
Release date:2024-09-11
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.
Cell Res., 34, 2024
2YLO
DownloadVisualize
BU of 2ylo by Molmil
TARGETING THE BINDING FUNCTION 3 SITE OF THE ANDROGEN RECEPTOR THROUGH IN SILICO MOLECULAR MODELING
Descriptor: 1-[2-(4-METHYLPHENOXY)ETHYL]-2-(2-PHENOXYETHYLSULFANYL)BENZIMIDAZOLE, ANDROGEN RECEPTOR, SULFATE ION, ...
Authors:Lack, N.A, Axerio, P, Tavassoli, P, Kuchenbecker, K, Han, F.Q, Chan, K.H, Feau, C, LeBlanc, E, Tomlinson, E, Guy, R.K, Rennie, P.S, Cherkasov, A.
Deposit date:2011-06-04
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Targeting the Binding Function 3 (Bf3) Site of the Human Androgen Receptor Through Virtual Screening.
J.Med.Chem., 54, 2011
2YLQ
DownloadVisualize
BU of 2ylq by Molmil
TARGETING THE BINDING FUNCTION 3 SITE OF THE ANDROGEN RECEPTOR THROUGH IN SILICO MOLECULAR MODELING
Descriptor: 3-[1-[2-(4-METHYLPHENOXY)ETHYL]BENZIMIDAZOL-2-YL]SULFANYLPROPANOIC ACID, ANDROGEN RECEPTOR, SULFATE ION, ...
Authors:Lack, N.A, Axerio, P, Tavassoli, P, Kuchenbecker, K, Han, F.Q, Chan, K.H, Feau, C, LeBlanc, E, Tomlinson, E, Guy, R.K, Rennie, P.S, Cherkasov, A.
Deposit date:2011-06-04
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Targeting the Binding Function 3 (Bf3) Site of the Human Androgen Receptor Through Virtual Screening.
J.Med.Chem., 54, 2011
2YLP
DownloadVisualize
BU of 2ylp by Molmil
TARGETING THE BINDING FUNCTION 3 SITE OF THE ANDROGEN RECEPTOR THROUGH IN SILICO MOLECULAR MODELING
Descriptor: 3-[(2,4-DICHLOROPHENYL)METHYLSULFANYLMETHYL]BENZOIC ACID, ANDROGEN RECEPTOR, SULFATE ION, ...
Authors:Lack, N.A, Axerio, P, Tavassoli, P, Kuchenbecker, K, Han, F.Q, Chan, K.H, Feau, C, LeBlanc, E, Tomlinson, E, Guy, R.K, Rennie, P.S, Cherkasov, A.
Deposit date:2011-06-04
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Targeting the Binding Function 3 (Bf3) Site of the Human Androgen Receptor Through Virtual Screening.
J.Med.Chem., 54, 2011
6EQI
DownloadVisualize
BU of 6eqi by Molmil
Structure of PINK1 bound to ubiquitin
Descriptor: GLYCEROL, Nb696, Serine/threonine-protein kinase PINK1, ...
Authors:Schubert, A.F, Gladkova, C, Pardon, E, Wagstaff, J.L, Freund, S.M.V, Steyaert, J, Maslen, S, Komander, D.
Deposit date:2017-10-13
Release date:2017-11-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of PINK1 in complex with its substrate ubiquitin.
Nature, 552, 2017

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon