Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7TIX
DownloadVisualize
BU of 7tix by Molmil
Crystal structure of SARS-CoV-2 3CL in complex with inhibitor EB56
Descriptor: 3C-like proteinase nsp5, MAGNESIUM ION, N~2~-{[(naphthalen-2-yl)methoxy]carbonyl}-N-{(2S)-1-oxo-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide
Authors:Forouhar, F, Liu, H, Iketani, S, Zack, A, Khanizeman, N, Bednarova, E, Fowler, B, Hong, S.J, Mohri, H, Nair, M.S, Huang, Y, Tay, N.E.S, Lee, S, Karan, C, Resnick, S.J, Quinn, C, Li, W, Shion, H, Jurtschenko, C, Lauber, M.A, McDonald, T, Stokes, M.E, Hurst, B, Rovis, T, Chavez, A, Ho, D.D, Stockwell, B.R.
Deposit date:2022-01-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Development of optimized drug-like small molecule inhibitors of the SARS-CoV-2 3CL protease for treatment of COVID-19.
Nat Commun, 13, 2022
7TJ0
DownloadVisualize
BU of 7tj0 by Molmil
Crystal structure of SARS-CoV-2 3CL in complex with inhibitor SL-4-241
Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-3-cyclohexyl-L-alanyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5, ACETATE ION
Authors:Forouhar, F, Liu, H, Iketani, S, Zack, A, Khanizeman, N, Bednarova, E, Fowler, B, Hong, S.J, Mohri, H, Nair, M.S, Huang, Y, Tay, N.E.S, Lee, S, Karan, C, Resnick, S.J, Quinn, C, Li, W, Shion, H, Jurtschenko, C, Lauber, M.A, McDonald, T, Stokes, M, Hurst, B, Rovis, T, Chavez, A, Ho, D.D, Stockwell, B.R.
Deposit date:2022-01-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Development of optimized drug-like small molecule inhibitors of the SARS-CoV-2 3CL protease for treatment of COVID-19.
Nat Commun, 13, 2022
6AGV
DownloadVisualize
BU of 6agv by Molmil
Crystal structure of apo mouse MsrA
Descriptor: GLYCEROL, Mitochondrial peptide methionine sulfoxide reductase
Authors:Hwang, K.Y, Kim, J.S.
Deposit date:2018-08-14
Release date:2019-08-28
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of apo mouse MsrA
To Be Published
4HJM
DownloadVisualize
BU of 4hjm by Molmil
Crystal structure of Glutaredoxin 1 from Plasmodium falciparum (PfGrx1) solved by S-SAD
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin
Authors:Manickam, Y, Sharma, A.
Deposit date:2012-10-13
Release date:2013-12-25
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.5462 Å)
Cite:Atomic resolution crystal structure of glutaredoxin 1 from Plasmodium falciparum and comparison with other glutaredoxins.
Acta Crystallogr.,Sect.D, 70, 2014
2M0B
DownloadVisualize
BU of 2m0b by Molmil
Homodimeric transmembrane domain of the human receptor tyrosine kinase ErbB1 (EGFR, HER1) in micelles
Descriptor: Epidermal growth factor receptor
Authors:Lesovoy, D.M, Bocharov, E.V, Pustovalova, Y.E, Bocharova, O.V, Arseniev, A.S.
Deposit date:2012-10-24
Release date:2013-10-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Alternative packing of EGFR transmembrane domain suggests that protein-lipid interactions underlie signal conduction across membrane.
Biochim. Biophys. Acta, 1858, 2016
2K85
DownloadVisualize
BU of 2k85 by Molmil
p190-A RhoGAP FF1 domain
Descriptor: Glucocorticoid receptor DNA-binding factor 1
Authors:Bonet, R, Ruiz, L, Martin-Malpartida, P, Macias, M.
Deposit date:2008-09-02
Release date:2009-05-19
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NMR structural studies on human p190-A RhoGAPFF1 revealed that domain phosphorylation by the PDGF-receptor alpha requires its previous unfolding.
J.Mol.Biol., 389, 2009
2LTK
DownloadVisualize
BU of 2ltk by Molmil
Solution structure of a monomeric truncated mutant of Trypanosoma brucei 1-C-Grx1
Descriptor: Mono-cysteine glutaredoxin
Authors:Pavan, C, Gesiot, L, Sturlese, M, Mammi, S, Manta, B, Comini, M, Bellanda, M.
Deposit date:2012-05-29
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Iron-Sulfur Cluster Binding by Mitochondrial Monothiol Glutaredoxin-1 of Trypanosoma brucei: Molecular Basis of Iron-Sulfur Cluster Coordination and Relevance for Parasite Infectivity.
Antioxid Redox Signal, 19, 2013
2LZL
DownloadVisualize
BU of 2lzl by Molmil
FGFR3tm
Descriptor: Fibroblast growth factor receptor 3
Authors:Lesovoy, D.M, Bocharov, E.V, Goncharuk, S.A, Arseniev, A.S.
Deposit date:2012-10-04
Release date:2013-10-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of FGFR3 Transmembrane Domain Dimer: Implications for Signaling and Human Pathologies.
Structure, 21, 2013
2O8Z
DownloadVisualize
BU of 2o8z by Molmil
Bound Structure of CRF1 Extracellular Domain Antagonist
Descriptor: cCRF(30-41) Peptide
Authors:Mesleh, M.F, Shirley, W.A, Heise, C.E, Ling, N, Maki, R.A, Laura, R.P.
Deposit date:2006-12-12
Release date:2006-12-26
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structural characterization of a minimal peptide antagonist bound to the extracellular domain of the corticotropin-releasing factor1 receptor.
J.Biol.Chem., 282, 2007
4KT8
DownloadVisualize
BU of 4kt8 by Molmil
The complex structure of Rv3378c-Y51FY90F with substrate, TPP
Descriptor: (2E)-3-methyl-5-[(1R,2S,8aS)-1,2,5,5-tetramethyl-1,2,3,5,6,7,8,8a-octahydronaphthalen-1-yl]pent-2-en-1-yl trihydrogen diphosphate, Diterpene synthase, PHOSPHATE ION
Authors:Chan, H.C, Feng, X, Ko, T.P, Huang, C.H, Hu, Y, Zheng, Y, Bogue, S, Nakano, C, Hoshino, T, Zhang, L, Lv, P, Liu, W, Crick, D.C, Liang, P.H, Wang, A.H, Oldfield, E, Guo, R.T.
Deposit date:2013-05-20
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and inhibition of tuberculosinol synthase and decaprenyl diphosphate synthase from Mycobacterium tuberculosis.
J.Am.Chem.Soc., 136, 2014
5GTX
DownloadVisualize
BU of 5gtx by Molmil
Crystal structure of mutated buckwheat glutaredoxin
Descriptor: buckwheat glutaredoxin
Authors:Zhang, X, Wang, W, Zhao, Y, Wang, Z, Wang, H.
Deposit date:2016-08-23
Release date:2017-07-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural insights into the binding of buckwheat glutaredoxin with GSH and regulation of its catalytic activity
J. Inorg. Biochem., 173, 2017
3HMR
DownloadVisualize
BU of 3hmr by Molmil
Crystal structure of the N-terminal fragment (31-127) of the mouse hepatocyte growth factor/scatter factor
Descriptor: Hepatocyte growth factor, SULFATE ION
Authors:Tolbert, W.D.
Deposit date:2009-05-29
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for agonism and antagonism of hepatocyte growth factor.
Proc.Natl.Acad.Sci.USA, 107, 2010
3HN4
DownloadVisualize
BU of 3hn4 by Molmil
Crystal structure of the NK2 fragment (28-289) of human hepatocyte growth factor/scatter factor
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hepatocyte growth factor, ...
Authors:Tolbert, W.D.
Deposit date:2009-05-29
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for agonism and antagonism of hepatocyte growth factor.
Proc.Natl.Acad.Sci.USA, 107, 2010
3GX8
DownloadVisualize
BU of 3gx8 by Molmil
Structural and biochemical characterization of yeast monothiol glutaredoxin Grx5
Descriptor: Monothiol glutaredoxin-5, mitochondrial, SULFATE ION
Authors:Wang, Y, He, Y.X, Yu, J, Xiong, Y, Chen, Y, Zhou, C.Z.
Deposit date:2009-04-01
Release date:2010-04-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.673 Å)
Cite:Structural and biochemical characterization of yeast monothiol glutaredoxin Grx5
To be Published
3HMS
DownloadVisualize
BU of 3hms by Molmil
Crystal Crystal structure of the N-terminal fragment (28-126) of the human hepatocyte growth factor/scatter factor, orthorhombic crystal form
Descriptor: Hepatocyte growth factor, SULFATE ION
Authors:Tolbert, W.D.
Deposit date:2009-05-29
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for agonism and antagonism of hepatocyte growth factor.
Proc.Natl.Acad.Sci.USA, 107, 2010
3HMT
DownloadVisualize
BU of 3hmt by Molmil
Crystal structure of the N-terminal fragment (28-126) of the human hepatocyte growth factor/scatter factor, trigonal crystal form
Descriptor: Hepatocyte growth factor
Authors:Tolbert, W.D.
Deposit date:2009-05-29
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for agonism and antagonism of hepatocyte growth factor.
Proc.Natl.Acad.Sci.USA, 107, 2010
3TKS
DownloadVisualize
BU of 3tks by Molmil
Crystal structure of full-length human peroxiredoxin 4 in three different redox states
Descriptor: PEROXIDE ION, Peroxiredoxin-4
Authors:Wang, X, Wang, L, Wang, X, Sun, F, Wang, C.-C.
Deposit date:2011-08-28
Release date:2011-10-05
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural insights into the peroxidase activity and inactivation of human peroxiredoxin 4
Biochem.J., 2011
2AYT
DownloadVisualize
BU of 2ayt by Molmil
The crystal structure of a protein disulfide oxidoreductase from aquifex aeolicus
Descriptor: GLYCEROL, SULFATE ION, glutaredoxin-like protein
Authors:Pedone, E, D'Ambrosio, K, De Simone, G, Rossi, M, Pedone, C, Bartolucci, S.
Deposit date:2005-09-08
Release date:2006-07-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Insights on a new PDI-like family: structural and functional analysis of a protein disulfide oxidoreductase from the bacterium Aquifex aeolicus
J.Mol.Biol., 356, 2006
4N0Z
DownloadVisualize
BU of 4n0z by Molmil
Crystal structure of cisplatin bound to a plasmodium falciparum glutaredoxin 1 (PfGrx1)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
3TKQ
DownloadVisualize
BU of 3tkq by Molmil
Crystal structure of full-length human peroxiredoxin 4 with mixed conformation
Descriptor: Peroxiredoxin-4
Authors:Wang, X, Wang, L, Wang, X, Sun, F, Wang, C.-C.
Deposit date:2011-08-28
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Structural insights into the peroxidase activity and inactivation of human peroxiredoxin 4
Biochem.J., 2011
1ZOF
DownloadVisualize
BU of 1zof by Molmil
Crystal structure of alkyl hydroperoxide-reductase (AhpC) from Helicobacter Pylori
Descriptor: alkyl hydroperoxide-reductase
Authors:Papinutto, E, Windle, H.J, Cendron, L, Battistutta, R, Kelleher, D, Zanotti, G.
Deposit date:2005-05-13
Release date:2005-11-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of alkyl hydroperoxide-reductase (AhpC) from Helicobacter pylori.
Biochim.Biophys.Acta, 1753, 2005
4N10
DownloadVisualize
BU of 4n10 by Molmil
Crystal structure of plasmodium falciparum oxidized glutaredoxin 1 (PfGrx1) complexed with cisplatin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
4N11
DownloadVisualize
BU of 4n11 by Molmil
Crystal structure of plasmodium falciparum reduced glutaredoxin 1 (PfGrx1) complexed with cisplatin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Cisplatin, ...
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-10-03
Release date:2014-10-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Interaction of Cisplatin with plasmodium falciparum Glutaredoxin 1
To be Published
4MZB
DownloadVisualize
BU of 4mzb by Molmil
Crystal structure of Grx1 from Plasmodium falciparum
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, Glutaredoxin
Authors:Yogavel, M, Sharma, A.
Deposit date:2013-09-30
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.038 Å)
Cite:Atomic resolution crystal structure of glutaredoxin 1 from Plasmodium falciparum and comparison with other glutaredoxins.
Acta Crystallogr.,Sect.D, 70, 2014
3WQK
DownloadVisualize
BU of 3wqk by Molmil
Crystal structure of Rv3378c with PO4
Descriptor: Diterpene synthase, PHOSPHATE ION
Authors:Chan, H.C, Feng, X, Ko, T.P, Huang, C.H, Hu, Y, Zheng, Y, Bogue, S, Nakano, C, Hoshino, T, Zhang, L, Lv, P, Liu, W, Crick, D.C, Liang, P.H, Wang, A.H, Oldfield, E, Guo, R.T.
Deposit date:2014-01-28
Release date:2014-02-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and inhibition of tuberculosinol synthase and decaprenyl diphosphate synthase from Mycobacterium tuberculosis.
J.Am.Chem.Soc., 136, 2014

221716

数据于2024-06-26公开中

PDB statisticsPDBj update infoContact PDBjnumon