PDB: 46984 resultsInfo pagesStatus searchChemie searchBIRD

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8BCK	Recombinant Tipula oleracea Nudivirus polyhedrin Descriptor: CALCIUM ION, MOBP Authors: Keown, J.R, Grimes, J.M. Deposit date: 2022-10-16 Release date: 2023-07-12 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample. Nat Commun, 14, 2023
8BC5	Recombinant Tipula oleracea Nudivirus Polyhedrin - Selenomethionine Descriptor: CALCIUM ION, MOBP Authors: Keown, J.R, Grimes, J.M. Deposit date: 2022-10-15 Release date: 2023-07-12 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample. Nat Commun, 14, 2023
8BBT	Native Tipula oleracea Nudivirus polyhedrin - 1960 Descriptor: CALCIUM ION, MOBP Authors: Keown, J.R, Grimes, J.M. Deposit date: 2022-10-14 Release date: 2023-07-12 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.69 Å) Cite: Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample. Nat Commun, 14, 2023
8BCL	Recombinant Tipula oleracea Nudivirus polyhedrin Expanded unit cell Descriptor: MOBP Authors: Keown, J.R, Grimes, J.M. Deposit date: 2022-10-16 Release date: 2023-07-12 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample. Nat Commun, 14, 2023
7XRY	Crystal structure of MERS main protease in complex with inhibitor YH-53 Descriptor: N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide, ORF1a Authors: Lin, C, Zhong, F.L, Zhou, X.L, Li, J, Zhang, J. Deposit date: 2022-05-12 Release date: 2022-12-21 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structural Basis for the Inhibition of Coronaviral Main Proteases by a Benzothiazole-Based Inhibitor. Viruses, 14, 2022
7XRS	Crystal structure of SARS-Cov-2 main protease in complex with inhibitor YH-53 Descriptor: N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide, Replicase polyprotein 1a Authors: Zhou, X.L, Zhong, F.L, Lin, C, Zeng, P, Zhang, J, Li, J. Deposit date: 2022-05-11 Release date: 2022-12-21 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Structural Basis for the Inhibition of Coronaviral Main Proteases by a Benzothiazole-Based Inhibitor. Viruses, 14, 2022
7YF7	NMR solution structures of the DNA minidumbbell formed by two ATTTT repeats Descriptor: DNA (5'-D(*AP*TP*TP*TP*TP*AP*TP*TP*TP*T)-3'), SODIUM ION Authors: Wan, L, Li, J, Guo, P. Deposit date: 2022-07-07 Release date: 2023-01-11 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution Nuclear Magnetic Resonance Structures of ATTTT and ATTTC Pentanucleotide Repeats Associated with SCA37 and FAMEs. Acs Chem Neurosci, 14, 2023
6Q96	HDM2 (17-111, WILD TYPE) COMPLEXED WITH COMPOUND 12 AT 1.8A; Structural states of Hdm2 and HdmX: X-ray elucidation of adaptations and binding interactions for different chemical compound classes Descriptor: 4-[(4~{S})-5-(5-chloranyl-2-oxidanylidene-1~{H}-pyridin-3-yl)-2-[2-(dimethylamino)-4-methoxy-pyrimidin-5-yl]-6-oxidanylidene-3-propan-2-yl-4~{H}-pyrrolo[3,4-c]pyrazol-4-yl]benzenecarbonitrile, E3 ubiquitin-protein ligase Mdm2, SULFATE ION Authors: Kallen, J. Deposit date: 2018-12-17 Release date: 2019-05-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural States of Hdm2 and HdmX: X-ray Elucidation of Adaptations and Binding Interactions for Different Chemical Compound Classes. Chemmedchem, 14, 2019
7YGQ	Crystal structure of SARS main protease in complex with inhibitor YH-53 Descriptor: 3C-like proteinase nsp5, N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxidanylidene-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-4-methoxy-1H-indole-2-carboxamide Authors: Lin, C, Zhong, F.L, Zhou, X.L, Zeng, P, Zhang, J, Li, J. Deposit date: 2022-07-12 Release date: 2022-12-21 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Structural Basis for the Inhibition of Coronaviral Main Proteases by a Benzothiazole-Based Inhibitor. Viruses, 14, 2022
8BKE	Crystal structure of the Klebsiella phage KP34p57 capsular depolymerase Descriptor: Uncharacterized protein 57 Authors: Berisio, R, Squeglia, F. Deposit date: 2022-11-09 Release date: 2023-08-30 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Klebsiella phage KP34gp57 capsular depolymerase structure and function: from a serendipitous finding to the design of active mini-enzymes against K. pneumoniae. Mbio, 14, 2023
8BMZ	Bacteroides thetaiotaomicron surface lipoprotein BT1954 bound to adenosylcobalamin Descriptor: Adenosylcobalamin, CHLORIDE ION, Putative surface layer protein, ... Authors: Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B. Deposit date: 2022-11-11 Release date: 2023-08-16 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides. Nat Commun, 14, 2023
7YCK	Crystal structure of SARS-CoV-2 Spike RBD in complex with FP-12A Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, FP-12A Fab heavy chain, FP-12A Fab light chain, ... Authors: Nguyen, V.H.T, Chen, X. Deposit date: 2022-07-01 Release date: 2023-02-01 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural basis for a conserved neutralization epitope on the receptor-binding domain of SARS-CoV-2. Nat Commun, 14, 2023
7YCL	Crystal structure of SARS-CoV-2 Spike RBD in complex with IS-9A Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, IS-9A Fab heavy chain, IS-9A Fab light chain, ... Authors: Mohapatra, A, Chen, X. Deposit date: 2022-07-01 Release date: 2023-02-01 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.13 Å) Cite: Structural basis for a conserved neutralization epitope on the receptor-binding domain of SARS-CoV-2. Nat Commun, 14, 2023
7YCN	Crystal structure of SARS-CoV-2 Spike RBD in complex with IY-2A Fab Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IY-2A Fab heavy chain, IY-2A Fab light chain, ... Authors: Mohapatra, A, Chen, X. Deposit date: 2022-07-01 Release date: 2023-02-01 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Structural basis for a conserved neutralization epitope on the receptor-binding domain of SARS-CoV-2. Nat Commun, 14, 2023
7WIV	Cryo-EM structure of Mycobacterium tuberculosis irtAB in complex with an AMP-PNP Descriptor: Mycobactin import ATP-binding/permease protein IrtA, Mycobactin import ATP-binding/permease protein IrtB, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER Authors: Zhang, B, Sun, S, Yang, H, Rao, Z. Deposit date: 2022-01-05 Release date: 2023-01-25 Last modified: 2024-04-10 Method: ELECTRON MICROSCOPY (2.88 Å) Cite: Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB. Protein Cell, 14, 2023
7WIU	Cryo-EM structure of Mycobacterium tuberculosis irtAB in inward-facing state Descriptor: Mycobactin import ATP-binding/permease protein IrtA, Mycobactin import ATP-binding/permease protein IrtB Authors: Zhang, B, Sun, S, Yang, H, Rao, Z. Deposit date: 2022-01-05 Release date: 2023-01-25 Last modified: 2024-04-10 Method: ELECTRON MICROSCOPY (3.48 Å) Cite: Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB. Protein Cell, 14, 2023
7WIW	Cryo-EM structure of Mycobacterium tuberculosis irtAB complexed with ATP in an occluded conformation Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Mycobactin import ATP-binding/permease protein IrtA, ... Authors: Zhang, B, Sun, S, Yang, H, Rao, Z. Deposit date: 2022-01-05 Release date: 2023-01-25 Last modified: 2024-04-10 Method: ELECTRON MICROSCOPY (3.12 Å) Cite: Cryo-EM structures for the Mycobacterium tuberculosis iron-loaded siderophore transporter IrtAB. Protein Cell, 14, 2023
8B8V	Crystal structure of the Rabies virus RNA free nucleoprotein- phosphoprotein complex Descriptor: DI(HYDROXYETHYL)ETHER, Nucleoprotein, Phosphoprotein Authors: Gerard, F.C.A, Jamin, M, Bourhis, J.M. Deposit date: 2022-10-05 Release date: 2023-03-15 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structure and Dynamics of the Unassembled Nucleoprotein of Rabies Virus in Complex with Its Phosphoprotein Chaperone Module. Viruses, 14, 2022
8BR9	Stapled peptide SP24 in complex with humanised RadA mutant HumRadA22 Descriptor: 4,6-diethylpyrimidin-2-amine, ADENOSINE-5'-DIPHOSPHATE, Breast cancer type 2 susceptibility protein, ... Authors: Pantelejevs, T, Hyvonen, M. Deposit date: 2022-11-22 Release date: 2023-03-08 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: A recombinant approach for stapled peptide discovery yields inhibitors of the RAD51 recombinase. Chem Sci, 14, 2023
8BJ7	Desulfovibrio desulfuricans FeFe Hydrogenase C178A mutant in Hinact-like state Descriptor: Binuclear [FeFe], di(thiomethyl)amine, carbon monoxide, ... Authors: Bikbaev, K, Span, I. Deposit date: 2022-11-03 Release date: 2023-03-22 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.04 Å) Cite: Binding of exogenous cyanide reveals new active-site states in [FeFe] hydrogenases. Chem Sci, 14, 2023
7WN0	Structure of PfENT1(Y190A) in complex with nanobody 19 Descriptor: Equilibrative nucleoside/nucleobase transporter, nanobody19 Authors: Wang, C, Deng, D, Ren, R.B, Yu, L.Y. Deposit date: 2022-01-17 Release date: 2023-02-01 Last modified: 2023-08-16 Method: ELECTRON MICROSCOPY (3.64 Å) Cite: Structural basis of the substrate recognition and inhibition mechanism of Plasmodium falciparum nucleoside transporter PfENT1. Nat Commun, 14, 2023
7WSX	Class III hybrid cluster protein (HCP) C67Y variant from Methanothermobacter marburgensis Descriptor: FE-S-O HYBRID CLUSTER, Hydroxylamine reductase Authors: Fujishiro, T. Deposit date: 2022-02-02 Release date: 2023-02-08 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (3 Å) Cite: Class III hybrid cluster protein homodimeric architecture shows evolutionary relationship with Ni, Fe-carbon monoxide dehydrogenases. Nat Commun, 14, 2023
7WN1	Structure of PfNT1(Y190A) in complex with nanobody 48 and inosine Descriptor: Equilibrative nucleoside/nucleobase transporter, INOSINE, nanobody48 Authors: Wang, C, Deng, D, Ren, R.B, Yu, L.Y. Deposit date: 2022-01-17 Release date: 2023-02-01 Last modified: 2023-08-16 Method: ELECTRON MICROSCOPY (3.11 Å) Cite: Structural basis of the substrate recognition and inhibition mechanism of Plasmodium falciparum nucleoside transporter PfENT1. Nat Commun, 14, 2023
7YAC	Paltusotine-bound SSTR2-Gi complex Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ... Authors: Zhao, J, Shao, Z. Deposit date: 2022-06-27 Release date: 2023-04-19 Last modified: 2023-09-27 Method: ELECTRON MICROSCOPY (3.24 Å) Cite: Prospect of acromegaly therapy: molecular mechanism of clinical drugs octreotide and paltusotine. Nat Commun, 14, 2023
7YIT	Molecular mechanism of biased signaling at the kappa opioid receptor Descriptor: Kappa-type opioid receptor, Nanobody39, Soluble cytochrome b562, ... Authors: Kim, K, Che, T. Deposit date: 2022-07-18 Release date: 2023-04-12 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Molecular mechanism of biased signaling at the kappa opioid receptor. Nat Commun, 14, 2023

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