Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8S5E
DownloadVisualize
BU of 8s5e by Molmil
Cryo-EM structure of Arf1-decorated membrane tubules
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, ADP-ribosylation factor 1, MAGNESIUM ION
Authors:Haupt, C, Semchonok, D.A, Stubbs, M.T, Bacia, K, Desfosses, A, Kastritis, P.L, Hamdi, F.
Deposit date:2024-02-23
Release date:2025-01-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of Arf1-decorated membrane tubules
Cell Structure, 2024
8STG
DownloadVisualize
BU of 8stg by Molmil
Discovery and clinical validation of RLY-4008, the first highly selective FGFR2 inhibitor with activity across FGFR2 alterations and resistance mutations
Descriptor: Fibroblast growth factor receptor 2, N-{4-[(5P)-4-amino-5-{3-fluoro-4-[(4-methylpyrimidin-2-yl)oxy]phenyl}-7-methyl-7H-pyrrolo[2,3-d]pyrimidin-6-yl]phenyl}-2-methylpropanamide
Authors:Valverde, R, Foster, L.
Deposit date:2023-05-10
Release date:2023-06-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.79 Å)
Cite:RLY-4008, the First Highly Selective FGFR2 Inhibitor with Activity across FGFR2 Alterations and Resistance Mutations.
Cancer Discov, 13, 2023
8SWE
DownloadVisualize
BU of 8swe by Molmil
FGFR2 Kinase Domain Bound to Reversible Inhibitor Cmpd 3
Descriptor: Fibroblast growth factor receptor 2, GLUTATHIONE, GLYCEROL, ...
Authors:Valverde, R, Foster, L.
Deposit date:2023-05-18
Release date:2024-02-14
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Discovery of lirafugratinib (RLY-4008), a highly selective irreversible small-molecule inhibitor of FGFR2.
Proc.Natl.Acad.Sci.USA, 121, 2024
8U1F
DownloadVisualize
BU of 8u1f by Molmil
FGFR2 Kinase Domain Bound to Irreversible Inhibitor Cmpd 10
Descriptor: Fibroblast growth factor receptor 2, GLYCEROL, N-[4-(4-amino-7-methyl-5-{4-[(4-methylpyrimidin-2-yl)oxy]phenyl}-7H-pyrrolo[2,3-d]pyrimidin-6-yl)phenyl]-2-methylpropanamide, ...
Authors:Valverde, R, Foster, L.
Deposit date:2023-08-31
Release date:2024-02-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.33 Å)
Cite:Discovery of lirafugratinib (RLY-4008), a highly selective irreversible small-molecule inhibitor of FGFR2.
Proc.Natl.Acad.Sci.USA, 121, 2024
2HN8
DownloadVisualize
BU of 2hn8 by Molmil
Structural characterization and oligomerization of PB1-F2, a pro-apoptotic influenza A virus protein
Descriptor: Protein PB1-F2
Authors:Bruns, K, Studtrucker, N, Sharma, A, Fossen, T, Mitzner, D, Eissmann, A, Tessmer, U, Roder, R, Henklein, P, Wray, V, Schubert, U.
Deposit date:2006-07-12
Release date:2006-11-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural characterization and oligomerization of PB1-F2, a pro-apoptotic influenza A virus protein.
J.Biol.Chem., 282, 2007
2WBN
DownloadVisualize
BU of 2wbn by Molmil
Crystal structure of the g2p (large terminase) nuclease domain from the bacteriophage SPP1
Descriptor: TERMINASE LARGE SUBUNIT
Authors:Smits, C, Chechik, M, Kovalevskiy, O.V, Shevtsov, M.B, Foster, A.W, Alonso, J.C, Antson, A.A.
Deposit date:2009-03-02
Release date:2009-03-24
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for the Nuclease Activity of a Bacteriophage Large Terminase.
Embo Rep., 10, 2009
2KI7
DownloadVisualize
BU of 2ki7 by Molmil
The solution structure of RPP29-RPP21 complex from Pyrococcus furiosus
Descriptor: Ribonuclease P protein component 1, Ribonuclease P protein component 4, ZINC ION
Authors:Xu, Y, Foster, M.P.
Deposit date:2009-04-28
Release date:2009-09-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of an archaeal RNase P binary protein complex: formation of the 30-kDa complex between Pyrococcus furiosus RPP21 and RPP29 is accompanied by coupled protein folding and highlights critical features for protein-protein and protein-RNA interactions.
J.Mol.Biol., 393, 2009
6QZT
DownloadVisualize
BU of 6qzt by Molmil
Crystal structure of Csx1 from Sulfolobus islandicus orthorhombic form
Descriptor: CRISPR-associated (Cas) DxTHG family
Authors:Molina, R, Montoya, G, Sofos, N, Stella, S.
Deposit date:2019-03-12
Release date:2019-10-02
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Structure of Csx1-cOA4complex reveals the basis of RNA decay in Type III-B CRISPR-Cas.
Nat Commun, 10, 2019
6R7B
DownloadVisualize
BU of 6r7b by Molmil
Crystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 1
Descriptor: CRISPR-associated (Cas) DxTHG family, RNA (5'-R(P*AP*AP*AP*A)-3')
Authors:Molina, R, Montoya, G, Sofos, N, Stella, S.
Deposit date:2019-03-28
Release date:2019-10-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Structure of Csx1-cOA4complex reveals the basis of RNA decay in Type III-B CRISPR-Cas.
Nat Commun, 10, 2019
3OO1
DownloadVisualize
BU of 3oo1 by Molmil
Structure of E. Coli CheY mutant A113P in the absence of Sulfate
Descriptor: Chemotaxis protein CheY, MAGNESIUM ION
Authors:Immormino, R.M, Bourret, R.B.
Deposit date:2010-08-30
Release date:2011-08-31
Last modified:2025-04-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Role of Position K+4 in the Phosphorylation and Dephosphorylation Reaction Kinetics of the CheY Response Regulator.
Biochemistry, 60, 2021
2L4L
DownloadVisualize
BU of 2l4l by Molmil
Structural insights into the cTAR DNA recognition by the HIV-1 Nucleocapsid protein: role of sugar deoxyriboses in the binding polarity of NC
Descriptor: 5'-D(*CP*TP*GP*G)-3', HIV-1 nucleocapsid protein NCp7, ZINC ION
Authors:Bazzi, A, Zargarian, L, Chaminade, F, Boudier, C, De Rocquigny, H, Rene, B, Mely, Y, Fosse, P, Mauffret, O.
Deposit date:2010-10-08
Release date:2010-12-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insights into the cTAR DNA recognition by the HIV-1 nucleocapsid protein: role of sugar deoxyriboses in the binding polarity of NC.
Nucleic Acids Res., 39, 2011
2XKK
DownloadVisualize
BU of 2xkk by Molmil
CRYSTAL STRUCTURE OF MOXIFLOXACIN, DNA, and A. BAUMANNII TOPO IV (PARE-PARC FUSION TRUNCATE)
Descriptor: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(4aS,7aS)-octahydro-6H-pyrrolo[3,4-b]pyridin-6-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA, MAGNESIUM ION, ...
Authors:Wohlkonig, A, Chan, P.F, Fosberry, A.P, Homes, P, Huang, J, Kranz, M, Leydon, V.R, Miles, T.J, Pearson, N.D, Perera, R.L, Shillings, A.J, Gwynn, M.N, Bax, B.D.
Deposit date:2010-07-08
Release date:2010-09-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural Basis of Quinolone Inhibition of Type Iia Topoisomerases and Target-Mediated Resistance
Nat.Struct.Mol.Biol., 17, 2010
2XCT
DownloadVisualize
BU of 2xct by Molmil
The twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNA
Descriptor: 1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID, 5'-D(AP*GP*CP*CP*GP*TP*AP*G)-3', 5'-D(GP*TP*AP*CP*AP*CP*CP*GP*CP*AP*CP*A)-3', ...
Authors:Bax, B.D, Chan, P, Eggleston, D.S, Fosberry, A, Gentry, D.R, Gorrec, F, Giordano, I, Hann, M.M, Hennessy, A, Hibbs, M, Huang, J, Jones, E, Jones, J, Brown, K.K, Lewis, C.J, May, E, Singh, O, Spitzfaden, C, Shen, C, Shillings, A, Theobald, A, Wohlkonig, A, Pearson, N.D, Gwynn, M.N.
Deposit date:2010-04-25
Release date:2010-08-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Type Iia Topoisomerase Inhibition by a New Class of Antibacterial Agents.
Nature, 466, 2010
2XKJ
DownloadVisualize
BU of 2xkj by Molmil
CRYSTAL STRUCTURE OF CATALYTIC CORE OF A. BAUMANNII TOPO IV (PARE- PARC FUSION TRUNCATE)
Descriptor: GLYCEROL, SULFATE ION, TOPOISOMERASE IV
Authors:Wohlkonig, A, Chan, P.F, Fosberry, A.P, Homes, P, Huang, J, Kranz, M, Leydon, V.R, Miles, T.J, Pearson, N.D, Perera, R.L, Shillings, A.J, Gwynn, M.N, Bax, B.D.
Deposit date:2010-07-08
Release date:2010-09-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Basis of Quinolone Inhibition of Type Iia Topoisomerases and Target-Mediated Resistance
Nat.Struct.Mol.Biol., 17, 2010
4JYH
DownloadVisualize
BU of 4jyh by Molmil
Crystal structure of RARbeta LBD in complex with selective agonist BMS948 [4-{[(8-phenylnaphthalen-2-yl)carbonyl]amino}benzoic acid]
Descriptor: 4-{[(8-phenylnaphthalen-2-yl)carbonyl]amino}benzoic acid, CITRATE ANION, Nuclear receptor coactivator 1, ...
Authors:Nadendla, E.K, Teyssier, C, Germain, P, Delfosse, V, Bourguet, W.
Deposit date:2013-03-29
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:An Unexpected Mode Of Binding Defines BMS948 as A Full Retinoic Acid Receptor beta (RAR beta , NR1B2) Selective Agonist.
Plos One, 10, 2015
9GZP
DownloadVisualize
BU of 9gzp by Molmil
WT-IAPP cryo-EM structure Type LL - control reaction
Descriptor: Islet amyloid polypeptide
Authors:Wilkinson, M, Taylor, A.I.P, Xu, Y, Chakraborty, P, Brinkworth, A, Willis, L.F, Zhuravleva, A, Ranson, N.A, Foster, R, Radford, S.E.
Deposit date:2024-10-04
Release date:2025-03-05
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Kinetic Steering of Amyloid Formation and Polymorphism by Canagliflozin, a Type-2 Diabetes Drug.
J.Am.Chem.Soc., 147, 2025
4JYI
DownloadVisualize
BU of 4jyi by Molmil
Crystal structure of RARbeta LBD in complex with selective partial agonist BMS641 [3-chloro-4-[(E)-2-(5,5-dimethyl-8-phenyl-5,6-dihydronaphthalen-2-yl)ethenyl]benzoic acid]
Descriptor: 3-chloro-4-[(E)-2-(5,5-dimethyl-8-phenyl-5,6-dihydronaphthalen-2-yl)ethenyl]benzoic acid, CITRATE ANION, Nuclear receptor coactivator 1, ...
Authors:Nadendla, E.K, Teyssier, C, Germain, P, Delfosse, V, Bourguet, W.
Deposit date:2013-03-29
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An Unexpected Mode Of Binding Defines BMS948 as A Full Retinoic Acid Receptor beta (RAR beta , NR1B2) Selective Agonist.
Plos One, 10, 2015
9GZY
DownloadVisualize
BU of 9gzy by Molmil
WT-IAPP cryo-EM structure Type LLUU, doxazosin reaction
Descriptor: Islet amyloid polypeptide
Authors:Wilkinson, M, Taylor, A.I.P, Xu, Y, Chakraborty, P, Brinkworth, A, Willis, L.F, Zhuravleva, A, Ranson, N.A, Foster, R, Radford, S.E.
Deposit date:2024-10-04
Release date:2025-03-05
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Kinetic Steering of Amyloid Formation and Polymorphism by Canagliflozin, a Type-2 Diabetes Drug.
J.Am.Chem.Soc., 147, 2025
9GZW
DownloadVisualize
BU of 9gzw by Molmil
WT-IAPP cryo-EM structure Type LL, doxazosin reaction
Descriptor: Islet amyloid polypeptide
Authors:Wilkinson, M, Taylor, A.I.P, Xu, Y, Chakraborty, P, Brinkworth, A, Willis, L.F, Zhuravleva, A, Ranson, N.A, Foster, R, Radford, S.E.
Deposit date:2024-10-04
Release date:2025-03-05
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Kinetic Steering of Amyloid Formation and Polymorphism by Canagliflozin, a Type-2 Diabetes Drug.
J.Am.Chem.Soc., 147, 2025
9GZ6
DownloadVisualize
BU of 9gz6 by Molmil
WT-IAPP cryo-EM structure Type SS - control reaction
Descriptor: Islet amyloid polypeptide
Authors:Wilkinson, M, Taylor, A.I.P, Xu, Y, Chakraborty, P, Brinkworth, A, Willis, L.F, Zhuravleva, A, Ranson, N.A, Foster, R, Radford, S.E.
Deposit date:2024-10-03
Release date:2025-03-05
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Kinetic Steering of Amyloid Formation and Polymorphism by Canagliflozin, a Type-2 Diabetes Drug.
J.Am.Chem.Soc., 147, 2025
9GZS
DownloadVisualize
BU of 9gzs by Molmil
WT-IAPP cryo-EM structure Type LLU - control reaction
Descriptor: Islet amyloid polypeptide
Authors:Wilkinson, M, Taylor, A.I.P, Xu, Y, Chakraborty, P, Brinkworth, A, Willis, L.F, Zhuravleva, A, Ranson, N.A, Foster, R, Radford, S.E.
Deposit date:2024-10-04
Release date:2025-03-05
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Kinetic Steering of Amyloid Formation and Polymorphism by Canagliflozin, a Type-2 Diabetes Drug.
J.Am.Chem.Soc., 147, 2025
9GZX
DownloadVisualize
BU of 9gzx by Molmil
WT-IAPP cryo-EM structure Type LLU, doxazosin reaction
Descriptor: Islet amyloid polypeptide
Authors:Wilkinson, M, Taylor, A.I.P, Xu, Y, Chakraborty, P, Brinkworth, A, Willis, L.F, Zhuravleva, A, Ranson, N.A, Foster, R, Radford, S.E.
Deposit date:2024-10-04
Release date:2025-03-05
Last modified:2025-04-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Kinetic Steering of Amyloid Formation and Polymorphism by Canagliflozin, a Type-2 Diabetes Drug.
J.Am.Chem.Soc., 147, 2025
9GOS
DownloadVisualize
BU of 9gos by Molmil
CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B.
Descriptor: Flagella Membrane Glycoprotein 1B
Authors:Nievergelt, A.P, Hoepfner, L.M, Matrino, F, Scholz, M, Foster, H.E, Rodenfels, J, von Appen, A, Hippler, M, Pigino, G.
Deposit date:2024-09-06
Release date:2025-05-07
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:CryoEM structure of the native Chlamydomonas reinhardtii Flagella Membrane Glycoprotein 1B.
To Be Published
2LV4
DownloadVisualize
BU of 2lv4 by Molmil
ZirS C-terminal Domain
Descriptor: Putative outer membrane or exported protein
Authors:Prehna, G, Li, Y, Stoynov, N, Okon, M, Vukovic, M, Mcintosh, L.P, Foster, L.J, Finlay, B, Strynadka, N.C.J.
Deposit date:2012-06-28
Release date:2012-08-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The zinc regulated antivirulence pathway of salmonella is a multiprotein immunoglobulin adhesion system.
J.Biol.Chem., 287, 2012
2XNS
DownloadVisualize
BU of 2xns by Molmil
Crystal Structure Of Human G alpha i1 Bound To A Designed Helical Peptide Derived From The Goloco Motif Of RGS14
Descriptor: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I) SUBUNIT ALPHA-1, GUANOSINE-5'-DIPHOSPHATE, REGULATOR OF G-PROTEIN SIGNALING 14, ...
Authors:Bosch, D, Sammond, D.W, Butterfoss, G.L, Machius, M, Siderovski, D.P, Kuhlman, B.
Deposit date:2010-08-05
Release date:2011-06-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Computational Design of the Sequence and Structure of a Protein-Binding Peptide.
J.Am.Chem.Soc., 133, 2011

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon