Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5K2F
DownloadVisualize
BU of 5k2f by Molmil
Structure of NNQQNY from yeast prion Sup35 with cadmium acetate determined by MicroED
Descriptor: ACETATE ION, CADMIUM ION, Eukaryotic peptide chain release factor GTP-binding subunit
Authors:Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
Deposit date:2016-05-18
Release date:2016-09-14
Last modified:2024-03-06
Method:ELECTRON CRYSTALLOGRAPHY (1 Å)
Cite:Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Proc.Natl.Acad.Sci.USA, 113, 2016
5K2E
DownloadVisualize
BU of 5k2e by Molmil
Structure of NNQQNY from yeast prion Sup35 with zinc acetate determined by MicroED
Descriptor: ACETIC ACID, Eukaryotic peptide chain release factor GTP-binding subunit, ZINC ION
Authors:Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S.
Deposit date:2016-05-18
Release date:2016-09-14
Last modified:2024-03-06
Method:ELECTRON CRYSTALLOGRAPHY (1 Å)
Cite:Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.
Proc.Natl.Acad.Sci.USA, 113, 2016
1YJO
DownloadVisualize
BU of 1yjo by Molmil
Structure of NNQQNY from yeast prion Sup35 with zinc acetate
Descriptor: ACETIC ACID, Eukaryotic peptide chain release factor GTP-binding subunit, ZINC ION
Authors:Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
Deposit date:2005-01-15
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
1YJP
DownloadVisualize
BU of 1yjp by Molmil
Structure of GNNQQNY from yeast prion Sup35
Descriptor: Eukaryotic peptide chain release factor GTP-binding subunit
Authors:Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
Deposit date:2005-01-15
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
2JTU
DownloadVisualize
BU of 2jtu by Molmil
NMR structure of iota-RXIA(38)
Descriptor: I-superfamily conotoxin r11a
Authors:Wei, D, Norton, R.
Deposit date:2007-08-06
Release date:2008-08-19
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:NMR structure of iota-RXIA(38)
To be Published
6L4V
DownloadVisualize
BU of 6l4v by Molmil
Turning an asparaginyl endopeptidase into a peptide ligase
Descriptor: 1,2-ETHANEDIOL, Asparaginyl endopeptidase, DI(HYDROXYETHYL)ETHER
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-10-21
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Turning an Asparaginyl Endopeptidase into a Peptide Ligase
Acs Catalysis, 10, 2020
6L4W
DownloadVisualize
BU of 6l4w by Molmil
Turning an asparaginyl endopeptidase into a peptide ligase
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Asparaginyl endopeptidase, ...
Authors:El Sahili, A, Lescar, J.
Deposit date:2019-10-21
Release date:2020-10-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Turning an Asparaginyl Endopeptidase into a Peptide Ligase
Acs Catalysis, 10, 2020
5GTM
DownloadVisualize
BU of 5gtm by Molmil
Modified human MxA, nucleotide-free form
Descriptor: Interferon-induced GTP-binding protein Mx1
Authors:Chen, Y, Gao, S.
Deposit date:2016-08-22
Release date:2017-05-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.896 Å)
Cite:Conformational dynamics of dynamin-like MxA revealed by single-molecule FRET
Nat Commun, 8, 2017
5JEJ
DownloadVisualize
BU of 5jej by Molmil
Phosphorylated STING in complex with IRF-3 CTD
Descriptor: Interferon regulatory factor 3, Stimulator of interferon genes protein
Authors:Li, P, Shu, C.
Deposit date:2016-04-18
Release date:2016-06-15
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.
Proc.Natl.Acad.Sci.USA, 113, 2016
8I9J
DownloadVisualize
BU of 8i9j by Molmil
The PKR and E3L complex
Descriptor: Interferon-induced, double-stranded RNA-activated protein kinase, RNA-binding protein E3
Authors:Han, C.W, Kim, H.J.
Deposit date:2023-02-07
Release date:2023-06-28
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (6.39 Å)
Cite:Structural study of novel vaccinia virus E3L and dsRNA-dependent protein kinase complex.
Biochem.Biophys.Res.Commun., 665, 2023
2R3Z
DownloadVisualize
BU of 2r3z by Molmil
Crystal structure of mouse IP-10
Descriptor: Small-inducible cytokine B10
Authors:Jabeen, T, Leonard, P, Jamaluddin, H, Acharya, K.R.
Deposit date:2007-08-30
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of mouse IP-10, a chemokine
Acta Crystallogr.,Sect.D, 64, 2008
6IP8
DownloadVisualize
BU of 6ip8 by Molmil
Cryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Yokoyama, T, Shigematsu, H, Shirouzu, M, Imataka, H, Ito, T.
Deposit date:2018-11-02
Release date:2019-05-29
Last modified:2019-11-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:HCV IRES Captures an Actively Translating 80S Ribosome.
Mol.Cell, 74, 2019
3UIU
DownloadVisualize
BU of 3uiu by Molmil
Crystal structure of Apo-PKR kinase domain
Descriptor: Interferon-induced, double-stranded RNA-activated protein kinase
Authors:Li, F, Li, S, Yang, X, Shen, Y, Zhang, T.
Deposit date:2011-11-06
Release date:2012-11-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Crystal structure of Apo-PKR kinase domain
TO BE PUBLISHED
7YW5
DownloadVisualize
BU of 7yw5 by Molmil
Crystal Structure of the ITS1 processing by human ribonuclease ISG20L2 with mutation D327A
Descriptor: Interferon-stimulated 20 kDa exonuclease-like 2
Authors:Yang, X.Y, Liu, X.H.
Deposit date:2022-08-21
Release date:2024-01-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Molecular mechanism of human ISG20L2 for the ITS1 cleavage in the processing of 18S precursor ribosomal RNA.
Nucleic Acids Res., 52, 2024
7UGB
DownloadVisualize
BU of 7ugb by Molmil
Crystal structure of rat ERK2 complexed with docking peptide from ISG20
Descriptor: Interferon-stimulated gene 20 kDa protein, Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Torres Robles, J, Stiegler, A.L, Boggon, T.J, Turk, B.E.
Deposit date:2022-03-24
Release date:2023-03-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:To be determined
To Be Published
3VAY
DownloadVisualize
BU of 3vay by Molmil
Crystal structure of 2-Haloacid Dehalogenase from Pseudomonas syringae pv. Tomato DC3000
Descriptor: HAD-superfamily hydrolase, IODIDE ION, MAGNESIUM ION
Authors:Hou, Z, Zhang, H, Li, M, Chang, W.
Deposit date:2011-12-30
Release date:2013-01-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.979 Å)
Cite:Structure of 2-haloacid dehalogenase from Pseudomonas syringae pv. tomato DC3000
Acta Crystallogr.,Sect.D, 69, 2013
3SDL
DownloadVisualize
BU of 3sdl by Molmil
Crystal structure of human ISG15 in complex with NS1 N-terminal region from influenza B virus, Northeast Structural Genomics Consortium Target IDs HX6481, HR2873, and OR2
Descriptor: Non-structural protein 1, Ubiquitin-like protein ISG15
Authors:Guan, R, Ma, L.-C, Krug, R.M, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-06-09
Release date:2011-07-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural basis for the sequence-specific recognition of human ISG15 by the NS1 protein of influenza B virus.
Proc.Natl.Acad.Sci.USA, 108, 2011
7Y0O
DownloadVisualize
BU of 7y0o by Molmil
Interface of SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
Descriptor: P14 nanobody, Spike protein S1, heavy chain of R15, ...
Authors:Wang, L.
Deposit date:2022-06-05
Release date:2023-09-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:SARS-CoV-2 WT Spike in complex with R15 Fab and P14 Nanobody
To Be Published
8IRQ
DownloadVisualize
BU of 8irq by Molmil
Larimichthys crocea IFNd
Descriptor: Interferon d
Authors:Chen, J.J.
Deposit date:2023-03-19
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structure of large yellow croaker IFNd at 1.49 Angstrom resolution.
To Be Published
5JEL
DownloadVisualize
BU of 5jel by Molmil
Phosphorylated TRIF in complex with IRF-3
Descriptor: Interferon regulatory factor 3, Phosphorylated TRIF peptide
Authors:Zhao, B, Li, P.
Deposit date:2016-04-18
Release date:2016-06-15
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.
Proc.Natl.Acad.Sci.USA, 113, 2016
5JEO
DownloadVisualize
BU of 5jeo by Molmil
Phosphorylated Rotavirus NSP1 in complex with IRF-3
Descriptor: Interferon regulatory factor 3, PHOSPHATE ION, Rotavirus NSP1 peptide
Authors:Zhao, B, Li, P.
Deposit date:2016-04-18
Release date:2016-06-15
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (1.719 Å)
Cite:Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.
Proc.Natl.Acad.Sci.USA, 113, 2016
5JEK
DownloadVisualize
BU of 5jek by Molmil
Phosphorylated MAVS in complex with IRF-3
Descriptor: Interferon regulatory factor 3, MAVS peptide
Authors:Zhao, B, Li, P.
Deposit date:2016-04-18
Release date:2016-06-15
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.
Proc.Natl.Acad.Sci.USA, 113, 2016
4P4U
DownloadVisualize
BU of 4p4u by Molmil
Nucleotide-free stalkless-MxA
Descriptor: Interferon-induced GTP-binding protein Mx1, SULFATE ION
Authors:Rennie, M.L, McKelvie, S.A, Bulloch, E.M, Kingston, R.L.
Deposit date:2014-03-13
Release date:2014-11-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Transient Dimerization of Human MxA Promotes GTP Hydrolysis, Resulting in a Mechanical Power Stroke.
Structure, 22, 2014
4P4S
DownloadVisualize
BU of 4p4s by Molmil
GMPPCP-bound stalkless-MxA
Descriptor: Interferon-induced GTP-binding protein Mx1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
Authors:Rennie, M.L, McKelvie, S.A, Bulloch, E.M, Kingston, R.L.
Deposit date:2014-03-13
Release date:2014-10-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Transient Dimerization of Human MxA Promotes GTP Hydrolysis, Resulting in a Mechanical Power Stroke.
Structure, 22, 2014
3ZG4
DownloadVisualize
BU of 3zg4 by Molmil
NMR structure of the catalytic domain from E. faecium L,D- transpeptidase
Descriptor: ERFK/YBIS/YCFS/YNHG
Authors:Lecoq, L, Dubee, V, Triboulet, S, Bougault, C, Hugonnet, J.E, Arthur, M, Simorre, J.P.
Deposit date:2012-12-14
Release date:2013-04-24
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The Structure of Enterococcus Faecium L,D---Transpeptidase Acylated by Ertapenem Provides Insight Into the Inactivation Mechanism.
Acs Chem.Biol., 8, 2013

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon