Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4UTC
DownloadVisualize
BU of 4utc by Molmil
Crystal structure of dengue 2 virus envelope glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN E, ...
Authors:Kikuti, C, Rouvinski, A, Guardado-Calvo, P, Barba-Spaeth, G, Duquerroy, S, Vaney, M.C, Rey, F.A.
Deposit date:2014-07-18
Release date:2015-01-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses.
Nature, 520, 2015
7O88
DownloadVisualize
BU of 7o88 by Molmil
Cystal structure of Zymogen Granule Protein 16 (ZG16)
Descriptor: GLYCEROL, Zymogen granule membrane protein 16
Authors:Javitt, G, Kinzel, A, Fass, D.
Deposit date:2021-04-14
Release date:2021-06-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Conformational switches and redox properties of the colon cancer-associated human lectin ZG16.
Febs J., 288, 2021
5LLY
DownloadVisualize
BU of 5lly by Molmil
Photosensory Module of Bacteriophytochrome linked Diguanylyl Cyclase from Idiomarina species A28L
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, CHLORIDE ION, Diguanylate cyclase (GGDEF) domain-containing protein, ...
Authors:Gourinchas, G, Winkler, A.
Deposit date:2016-07-28
Release date:2017-03-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Long-range allosteric signaling in red light-regulated diguanylyl cyclases.
Sci Adv, 3, 2017
4UV7
DownloadVisualize
BU of 4uv7 by Molmil
The complex structure of extracellular domain of EGFR and GC1118A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, EPIDERMAL GROWTH FACTOR RECEPTOR, ...
Authors:Yoo, J.H, Cho, H.S.
Deposit date:2014-08-05
Release date:2015-10-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Gc1118, an Anti-Egfr Antibody with a Distinct Binding Epitope and Superior Inhibitory Activity Against High-Affinity Egfr Ligands.
Mol.Cancer Ther., 15, 2016
5LPM
DownloadVisualize
BU of 5lpm by Molmil
Crystal structure of the bromodomain of human Ep300 bound to the inhibitor XDM3d
Descriptor: ACETATE ION, Histone acetyltransferase p300, ~{N}-[(1~{S},2~{S})-7-chloranyl-2-oxidanyl-1,2,3,4-tetrahydronaphthalen-1-yl]-4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrole -2-carboxamide
Authors:Huegle, M, Wohlwend, D, Gerhardt, S.
Deposit date:2016-08-13
Release date:2017-08-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Beyond the BET Family: Targeting CBP/p300 with 4-Acyl Pyrroles.
Angew. Chem. Int. Ed. Engl., 56, 2017
7OP2
DownloadVisualize
BU of 7op2 by Molmil
Chadox1/ Chimpanzee adenovirus Y25 fiber knob protein
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Rizkallah, P.J, Baker, A.T, Parker, A.L, Teijeira Crespo, A, Lipka-Lloyd, M.
Deposit date:2021-05-28
Release date:2021-06-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:ChAdOx1 interacts with CAR and PF4 with implications for thrombosis with thrombocytopenia syndrome.
Sci Adv, 7, 2021
5LPW
DownloadVisualize
BU of 5lpw by Molmil
Crystal structure of the apo-BRI1 kinase domain (865-1160)
Descriptor: Protein BRASSINOSTEROID INSENSITIVE 1
Authors:Bojar, D, Martinez, J, Hothorn, M.
Deposit date:2016-08-15
Release date:2016-08-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.431 Å)
Cite:Crystal structures of the phosphorylated BRI1 kinase domain and implications for brassinosteroid signal initiation.
Plant J., 78, 2014
7O4P
DownloadVisualize
BU of 7o4p by Molmil
Cystal structure of Zymogen Granule Protein 16 (ZG16)
Descriptor: CHLORIDE ION, GLYCEROL, Zymogen granule membrane protein 16
Authors:Javitt, G, Fass, D.
Deposit date:2021-04-07
Release date:2021-06-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Conformational switches and redox properties of the colon cancer-associated human lectin ZG16.
Febs J., 288, 2021
5LPZ
DownloadVisualize
BU of 5lpz by Molmil
Crystal structure of the BRI1 kinase domain (865-1196) in complex with ADP from Arabidopsis thaliana
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Protein BRASSINOSTEROID INSENSITIVE 1
Authors:Bojar, D, Martinez, J, Hothorn, M.
Deposit date:2016-08-15
Release date:2016-08-24
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal structures of the phosphorylated BRI1 kinase domain and implications for brassinosteroid signal initiation.
Plant J., 78, 2014
6CV5
DownloadVisualize
BU of 6cv5 by Molmil
CryoEM structure of human enterovirus D68 full particle (after incubation with low molecular weight heparin)
Descriptor: viral protein 1, viral protein 2, viral protein 3, ...
Authors:Liu, Y, Rossmann, M.G.
Deposit date:2018-03-27
Release date:2019-07-24
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Bypassing pan-enterovirus host factor PLA2G16.
Nat Commun, 10, 2019
7OO9
DownloadVisualize
BU of 7oo9 by Molmil
Structure of Chloroflexus islandicus LOV domain C85A variant (CisFbFP)
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCEROL, Hybrid sensor histidine kinase/response regulator
Authors:Gushchin, I, Remeeva, A, Goncharov, I.M.
Deposit date:2021-05-26
Release date:2021-06-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution structure of a naturally red-shifted LOV domain.
Biochem.Biophys.Res.Commun., 567, 2021
6CF6
DownloadVisualize
BU of 6cf6 by Molmil
RNF146 TBM-Tankyrase ARC2-3 complex
Descriptor: RNF146, Tankyrase-1
Authors:Da Rosa, P.A, Xu, W.
Deposit date:2018-02-13
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural basis for tankyrase-RNF146 interaction reveals noncanonical tankyrase-binding motifs.
Protein Sci., 27, 2018
7O31
DownloadVisualize
BU of 7o31 by Molmil
Crystal structure of the anti-PAS Fab 1.2 in complex with its epitope peptide and the anti-Kappa VHH domain
Descriptor: 1,2-ETHANEDIOL, PAS#1 epitope peptide, anti-Kappa VHH domain, ...
Authors:Schilz, J, Schiefner, A, Skerra, A.
Deposit date:2021-04-01
Release date:2021-07-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Molecular recognition of structurally disordered Pro/Ala-rich sequences (PAS) by antibodies involves an Ala residue at the hot spot of the epitope.
J.Mol.Biol., 433, 2021
6CFL
DownloadVisualize
BU of 6cfl by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Tereshchenkov, A.G, Dobosz-Bartoszek, M, Osterman, I.A, Marks, J, Sergeeva, V.A, Kasatsky, P, Komarova, E.S, Stavrianidi, A.N, Rodin, I.A, Konevega, A.L, Sergiev, P.V, Sumbatyan, N.V, Mankin, A.S, Bogdanov, A.A, Polikanov, Y.S.
Deposit date:2018-02-15
Release date:2018-03-07
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Binding and Action of Amino Acid Analogs of Chloramphenicol upon the Bacterial Ribosome.
J. Mol. Biol., 430, 2018
5LU1
DownloadVisualize
BU of 5lu1 by Molmil
Human 14-3-3 sigma CLU3 mutant complexed with short HSPB6 phosphopeptide
Descriptor: 14-3-3 protein sigma, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Heat shock protein beta-6
Authors:Sluchanko, N.N, Beelen, S, Kulikova, A.A, Weeks, S.D, Antson, A.A, Gusev, N.B, Strelkov, S.V.
Deposit date:2016-09-07
Release date:2017-02-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis for the Interaction of a Human Small Heat Shock Protein with the 14-3-3 Universal Signaling Regulator.
Structure, 25, 2017
6CFH
DownloadVisualize
BU of 6cfh by Molmil
SWGMMGMLASQ segment from the low complexity domain of TDP-43
Descriptor: TAR DNA-binding protein 43
Authors:Guenther, E.L, Rodriguez, J.A, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2018-02-15
Release date:2018-05-23
Last modified:2024-05-15
Method:ELECTRON CRYSTALLOGRAPHY (1.5 Å)
Cite:Atomic structures of TDP-43 LCD segments and insights into reversible or pathogenic aggregation.
Nat. Struct. Mol. Biol., 25, 2018
7O2Z
DownloadVisualize
BU of 7o2z by Molmil
Crystal structure of the anti-PAS Fab 2.2 in complex with its epitope peptide
Descriptor: CHLORIDE ION, P/A#1 epitope peptide, anti-PAS Fab 2.2 chimeric heavy chain, ...
Authors:Schilz, J, Schiefner, A, Skerra, A.
Deposit date:2021-04-01
Release date:2021-07-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Molecular recognition of structurally disordered Pro/Ala-rich sequences (PAS) by antibodies involves an Ala residue at the hot spot of the epitope.
J.Mol.Biol., 433, 2021
6CFK
DownloadVisualize
BU of 6cfk by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Tereshchenkov, A.G, Dobosz-Bartoszek, M, Osterman, I.A, Marks, J, Sergeeva, V.A, Kasatsky, P, Komarova, E.S, Stavrianidi, A.N, Rodin, I.A, Konevega, A.L, Sergiev, P.V, Sumbatyan, N.V, Mankin, A.S, Bogdanov, A.A, Polikanov, Y.S.
Deposit date:2018-02-15
Release date:2018-03-07
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Binding and Action of Amino Acid Analogs of Chloramphenicol upon the Bacterial Ribosome.
J. Mol. Biol., 430, 2018
7O2A
DownloadVisualize
BU of 7o2a by Molmil
X-RAY STRUCTURE OF SMYD3 IN COMPLEX WITH benzodiazepine-type inhibitor compound 15
Descriptor: (2S)-1-(4-azanylpiperidin-1-yl)carbonyl-N-(2-cyclopropylethyl)-2-methyl-4-oxidanylidene-3,5-dihydro-2H-1,5-benzodiazepine-7-carboxamide, Histone-lysine N-methyltransferase SMYD3, S-ADENOSYLMETHIONINE, ...
Authors:Steuber, H.
Deposit date:2021-03-30
Release date:2021-07-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Discovery of the SMYD3 Inhibitor BAY-6035 Using Thermal Shift Assay (TSA)-Based High-Throughput Screening.
Slas Discov, 26, 2021
7O33
DownloadVisualize
BU of 7o33 by Molmil
Crystal structure of the anti-PAS Fab 3.1 in complex with its epitope peptide
Descriptor: APSA epitope peptide, anti-PAS Fab 3.1 chimeric heavy chain, anti-PAS Fab 3.1 chimeric light chain
Authors:Schilz, J, Skerra, A.
Deposit date:2021-04-01
Release date:2021-07-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Molecular recognition of structurally disordered Pro/Ala-rich sequences (PAS) by antibodies involves an Ala residue at the hot spot of the epitope.
J.Mol.Biol., 433, 2021
7OC6
DownloadVisualize
BU of 7oc6 by Molmil
Selenomethionine derivative of alpha-humulene synthase AsR6 from Sarocladium schorii
Descriptor: Alpha-humulene synthase asR6, GLYCEROL, SULFATE ION, ...
Authors:Schotte, C, Lukat, P, Deuschmann, A, Blankenfeldt, W, Cox, R.J.
Deposit date:2021-04-26
Release date:2021-07-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Understanding and Engineering the Stereoselectivity of Humulene Synthase.
Angew.Chem.Int.Ed.Engl., 60, 2021
5LYP
DownloadVisualize
BU of 5lyp by Molmil
Crystal structure of the Tpr Domain of Sgt2.
Descriptor: BORATE ION, Small glutamine-rich tetratricopeptide repeat-containing protein 2
Authors:Krysztofinska, E.M, Morgan, R.M.L, Thapaliya, A, Evans, N.J, Murray, J.W, Martinez-Lumbreras, S, Isaacson, R.L.
Deposit date:2016-09-28
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure and Interactions of the TPR Domain of Sgt2 with Yeast Chaperones and Ybr137wp.
Front Mol Biosci, 4, 2017
7O2C
DownloadVisualize
BU of 7o2c by Molmil
X-RAY STRUCTURE OF SMYD3 IN COMPLEX WITH the benzodiazepine-based probe BAY-6035
Descriptor: (2S)-1-[[(1R,5S)-3-azabicyclo[3.1.0]hexan-3-yl]carbonyl]-N-(2-cyclopropylethyl)-2-methyl-4-oxidanylidene-3,5-dihydro-2H-1,5-benzodiazepine-7-carboxamide, Histone-lysine N-methyltransferase SMYD3, S-ADENOSYLMETHIONINE, ...
Authors:Steuber, H.
Deposit date:2021-03-30
Release date:2021-07-07
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Discovery of the SMYD3 Inhibitor BAY-6035 Using Thermal Shift Assay (TSA)-Based High-Throughput Screening.
Slas Discov, 26, 2021
5LYW
DownloadVisualize
BU of 5lyw by Molmil
CRYSTAL STRUCTURE OF HUMAN METHIONINE AMINOPEPTIDASE-2 IN COMPLEX; WITH AN INHIBITOR 6-((R)-2-o-Tolyloxymethyl-pyrrolidin-1-yl)-9H-purine
Descriptor: 6-[(2~{R})-2-[(2-methylphenoxy)methyl]pyrrolidin-1-yl]-7~{H}-purine, MANGANESE (II) ION, Methionine aminopeptidase 2
Authors:Musil, D, Heinrich, T, Knoechel, T, Lehmann, M.
Deposit date:2016-09-28
Release date:2017-08-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Novel reversible methionine aminopeptidase-2 (MetAP-2) inhibitors based on purine and related bicyclic templates.
Bioorg. Med. Chem. Lett., 27, 2017
7ODH
DownloadVisualize
BU of 7odh by Molmil
Crystal structure of the O2-tolerant MBH-P242C from Ralstonia eutropha in its as-isolated state
Descriptor: CHLORIDE ION, FE4-S3 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2021-04-29
Release date:2021-07-07
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Resonance Raman spectroscopic analysis of the iron-sulfur cluster redox chain of the Ralstonia eutropha membrane-bound [NiFe]-hydrogenase
J Raman Spectrosc, 2021

243083

数据于2025-10-15公开中

PDB statisticsPDBj update infoContact PDBjnumon