PDB: 224931 resultsInfo pagesStatus searchChemie searchBIRD

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2FWH	atomic resolution crystal structure of the C-terminal domain of the electron transfer catalyst DsbD (reduced form at pH7) Descriptor: DI(HYDROXYETHYL)ETHER, IODIDE ION, Thiol:disulfide interchange protein dsbD Authors: Stirnimann, C.U, Rozhkova, A, Grauschopf, U, Boeckmann, R.A, Glockshuber, R, Capitani, G, Gruetter, M.G. Deposit date: 2006-02-02 Release date: 2006-06-13 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (0.99 Å) Cite: High-resolution structures of Escherichia coli cDsbD in different redox states: A combined crystallographic, biochemical and computational study J.Mol.Biol., 358, 2006
2FWI	Structure of PurE (N5-carboxyaminoimidazole ribonucleotide mutase) H59D, from the acidophilic bacterium Acetobacter aceti, complexed with 5-aminoimidazole ribonucleotide (AIR) Descriptor: 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, N5-carboxyaminoimidazole ribonucleotide mutase Authors: Starks, C.M, Kappock, T.J. Deposit date: 2006-02-02 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Biochemical and Structural Studies of N(5)-Carboxyaminoimidazole Ribonucleotide Mutase from the Acidophilic Bacterium Acetobacter aceti. Biochemistry, 45, 2006
2FWJ	Structure of PurE (N5-carboxyaminoimidazole ribonucleotide mutase) from the acidophilic bacterium Acetobacter aceti, complexed with AIR (5-aminoimidazole ribonucleotide) Descriptor: 5-AMINOIMIDAZOLE RIBONUCLEOTIDE, N5-carboxyaminoimidazole ribonucleotide mutase Authors: Starks, C.M, Kappock, T.J. Deposit date: 2006-02-02 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Biochemical and Structural Studies of N(5)-Carboxyaminoimidazole Ribonucleotide Mutase from the Acidophilic Bacterium Acetobacter aceti. Biochemistry, 45, 2006
2FWL	The cytochrome c552/CuA complex from Thermus thermophilus Descriptor: Cytochrome c oxidase subunit II, Cytochrome c-552, DINUCLEAR COPPER ION, ... Authors: Muresanu, L, Pristovsek, P, Loehr, F, Maneg, O, Mukrasch, M.D, Rueterjans, H, Ludwig, B, Luecke, C. Deposit date: 2006-02-02 Release date: 2006-03-28 Last modified: 2011-07-13 Method: SOLUTION NMR Cite: The electron transfer complex between cytochrome c552 and the CuA domain of the Thermus thermophilus ba3 oxidase - a combined NMR and computational approach J.Biol.Chem., 281, 2006
2FWM	Crystal Structure of E. coli EntA, a 2,3-dihydrodihydroxy benzoate dehydrogenase Descriptor: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase Authors: Gulick, A.M, Duax, W.L. Deposit date: 2006-02-02 Release date: 2006-06-27 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: Determination of the crystal structure of EntA, a 2,3-dihydro-2,3-dihydroxybenzoic acid dehydrogenase from Escherichia coli. Acta Crystallogr.,Sect.D, 62, 2006
2FWN	Phosphorylation of an active site serine in a ThDP-dependent enzyme by phosphonate inactivation Descriptor: Benzoylformate decarboxylase, CALCIUM ION, MAGNESIUM ION, ... Authors: Bera, A.K, Hasson, M.S. Deposit date: 2006-02-02 Release date: 2006-12-19 Last modified: 2021-08-04 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Mechanism-based inactivation of benzoylformate decarboxylase, a thiamin diphosphate-dependent enzyme J.Am.Chem.Soc., 129, 2007
2FWO	MHC Class I H-2Kd heavy chain in complex with beta-2microglobulin and peptide derived from influenza nucleoprotein Descriptor: Beta-2-microglobulin, H-2 class I histocompatibility antigen, K-D alpha chain, ... Authors: Mitaksov, V, Fremont, D.H. Deposit date: 2006-02-02 Release date: 2006-02-21 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural Definition of the H-2Kd Peptide-binding Motif. J.Biol.Chem., 281, 2006
2FWP	Structure of PurE (N5-carboxyaminoimidazole ribonucleotide mutase) H59N from the acidophilic bacterium Acetobacter aceti, bound to isocair Descriptor: (4R)-5-IMINO-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-4,5-DIHYDRO-1H-IMIDAZOLE-4-CARBOXYLIC ACID, CITRIC ACID, N5-carboxyaminoimidazole ribonucleotide mutase Authors: Starks, C.M, Kappock, T.J. Deposit date: 2006-02-02 Release date: 2006-06-13 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Biochemical and Structural Studies of N(5)-Carboxyaminoimidazole Ribonucleotide Mutase from the Acidophilic Bacterium Acetobacter aceti. Biochemistry, 45, 2006
2FWQ	Reduced enolate chromophore intermediate for Y66H GFP variant Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-02-02 Release date: 2006-03-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis. J.Am.Chem.Soc., 128, 2006
2FWR	Structure of Archaeoglobus Fulgidis XPB Descriptor: DNA repair protein RAD25, ISOPROPYL ALCOHOL, PHOSPHATE ION Authors: Fan, L, Arvai, A.S, Tainer, J.A. Deposit date: 2006-02-02 Release date: 2006-04-18 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Conserved XPB Core Structure and Motifs for DNA Unwinding: Implications for Pathway Selection of Transcription or Excision Repair Mol.Cell, 22, 2006
2FWS	First Ca2+ binding domain of the Na,Ca-exchanger (NCX1) Descriptor: CALCIUM ION, Sodium/calcium exchanger 1 Authors: Hilge, M, Aelen, J, Vuister, G.W. Deposit date: 2006-02-03 Release date: 2006-04-18 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Ca(2+) regulation in the na(+)/ca(2+) exchanger involves two markedly different ca(2+) sensors Mol.Cell, 22, 2006
2FWT	Crystal structure of DHC purified from Rhodobacter sphaeroides Descriptor: DHC, diheme cytochrome c, HEME C Authors: Leys, D. Deposit date: 2006-02-03 Release date: 2006-05-23 Last modified: 2019-10-02 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural and Functional Studies on DHC, the Diheme Cytochrome c from Rhodobacter sphaeroides, and Its Interaction with SHP, the sphaeroides Heme Protein Biochemistry, 45, 2006
2FWU	Second Ca2+ binding domain of the Na,Ca-exchanger (NCX1) Descriptor: CALCIUM ION, Sodium/calcium exchanger 1 Authors: Hilge, M, Vuister, G.W, Aelen, J. Deposit date: 2006-02-03 Release date: 2006-04-18 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Ca(2+) regulation in the na(+)/ca(2+) exchanger involves two markedly different ca(2+) sensors Mol.Cell, 22, 2006
2FWV	Crystal Structure of Rv0813 Descriptor: 1,4-DIETHYLENE DIOXIDE, GLYCEROL, hypothetical protein MtubF_01000852 Authors: Shepard, W, Haouz, A, Grana, M, Buschiazzo, A, Betton, J.M, Cole, S.T, Alzari, P.M, Structural Proteomics in Europe (SPINE) Deposit date: 2006-02-03 Release date: 2006-08-03 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The Crystal Structure of Rv0813c from Mycobacterium tuberculosis Reveals a New Family of Fatty Acid-Binding Protein-Like Proteins in Bacteria J.Bacteriol., 189, 2007
2FWW	human beta-tryptase II complexed with 4-piperidinebutyrate to make acylenzyme Descriptor: 4-PIPERIDINEBUTYRATE, Tryptase beta-2 Authors: Katz, B.A. Deposit date: 2006-02-03 Release date: 2006-02-14 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Structure-guided design of Peptide-based tryptase inhibitors. Biochemistry, 45, 2006
2FWY	Structure of human Hsp90-alpha bound to the potent water soluble inhibitor PU-H64 Descriptor: 8-(6-BROMO-BENZO[1,3]DIOXOL-5-YLSULFANYL)-9-(3-ISOPROPYLAMINO-PROPYL)-ADENINE, Heat shock protein HSP 90-alpha Authors: Immormino, R.M, Gewirth, D.T. Deposit date: 2006-02-03 Release date: 2006-10-03 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural and quantum chemical studies of 8-aryl-sulfanyl adenine class Hsp90 inhibitors. J.Med.Chem., 49, 2006
2FWZ	Structure of human Hsp90-alpha bound to the potent water soluble inhibitor PU-H71 Descriptor: 8-[(6-IODO-1,3-BENZODIOXOL-5-YL)THIO]-9-[3-(ISOPROPYLAMINO)PROPYL]-9H-PURIN-6-AMINE, Heat shock protein HSP 90-alpha Authors: Immormino, R.M, Gewirth, D.T. Deposit date: 2006-02-03 Release date: 2006-10-03 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural and quantum chemical studies of 8-aryl-sulfanyl adenine class Hsp90 inhibitors. J.Med.Chem., 49, 2006
2FX0	Crystal Structure of HlyIIR, a Hemolysin II transcriptional Regulator Descriptor: hemolysin II regulatory protein Authors: Kovalevskiy, O.V, Lebedev, A.A, Solonin, A.S, Antson, A.A. Deposit date: 2006-02-03 Release date: 2006-02-21 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal Structure of Bacillus cereus HlyIIR, a Transcriptional Regulator of the Gene for Pore-forming Toxin Hemolysin II. J.Mol.Biol., 365, 2007
2FX2	COMPARISON OF THE CRYSTAL STRUCTURES OF A FLAVODOXIN IN ITS THREE OXIDATION STATES AT CRYOGENIC TEMPERATURES Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN Authors: Watt, W, Watenpaugh, K.D. Deposit date: 1991-10-17 Release date: 1993-10-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Comparison of the crystal structures of a flavodoxin in its three oxidation states at cryogenic temperatures. J.Mol.Biol., 218, 1991
2FX3	Crystal Structure Determination of E. coli Elongation Factor, Tu using a Twinned Data Set Descriptor: Elongation factor Tu, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION Authors: Heffron, S.E, Moeller, R, Jurnak, F. Deposit date: 2006-02-03 Release date: 2006-03-28 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Solving the structure of Escherichia coli elongation factor Tu using a twinned data set. Acta Crystallogr.,Sect.D, 62, 2006
2FX4	Bovine trypsin bound by 4-piperidinebutyrate to make acylenzyme complex Descriptor: 4-PIPERIDINEBUTYRATE, CALCIUM ION, trypsin Authors: Katz, B.A. Deposit date: 2006-02-03 Release date: 2006-02-14 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structure-guided design of Peptide-based tryptase inhibitors. Biochemistry, 45, 2006
2FX5	Pseudomonas mendocina lipase Descriptor: L(+)-TARTARIC ACID, lipase Authors: Bott, R, Wu, S. Deposit date: 2006-02-03 Release date: 2006-08-01 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (1.8 Å) Cite:
2FX6	bovine trypsin complexed with 2-aminobenzamidazole Descriptor: 2H-BENZOIMIDAZOL-2-YLAMINE, CALCIUM ION, Trypsin Authors: Katz, B.A. Deposit date: 2006-02-03 Release date: 2006-02-14 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (1.57 Å) Cite: Structure-guided design of Peptide-based tryptase inhibitors. Biochemistry, 45, 2006
2FX7	Crystal structure of hiv-1 neutralizing human fab 4e10 in complex with a 16-residue peptide encompassing the 4e10 epitope on gp41 Descriptor: Fab 4E10, Fragment of HIV glycoprotein (GP41), GLYCEROL Authors: Cardoso, R.M.F, Brunel, F.M, Ferguson, S, Burton, D.R, Dawson, P.E, Wilson, I.A. Deposit date: 2006-02-03 Release date: 2006-12-19 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Structural basis of enhanced binding of extended and helically constrained peptide epitopes of the broadly neutralizing HIV-1 antibody 4E10. J.Mol.Biol., 365, 2007
2FX8	Crystal structure of hiv-1 neutralizing human fab 4e10 in complex with an aib-induced peptide encompassing the 4e10 epitope on gp41 Descriptor: Fab 4E10, Fragment of HIV glycoprotein (GP41) Authors: Cardoso, R.M.F, Brunel, F.M, Ferguson, S, Burton, D.R, Dawson, P.E, Wilson, I.A. Deposit date: 2006-02-03 Release date: 2006-12-19 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural basis of enhanced binding of extended and helically constrained peptide epitopes of the broadly neutralizing HIV-1 antibody 4E10. J.Mol.Biol., 365, 2007

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